RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 KTN1-AS1Q86SY8 53 aa10.4□□□□□ -0.74
CCM2-203ENST00000461377 ABCA13Q86UQ4 5058 aa10.33□□□□□ -0.76
CCM2-203ENST00000461377 UQCR11O14957 56 aa10.32□□□□□ -0.76
CCM2-203ENST00000461377 SPATA8Q6RVD6 105 aa10.3□□□□□ -0.76
CCM2-203ENST00000461377 RBM12B-AS1Q9P1G2 102 aa10.3□□□□□ -0.76
CCM2-203ENST00000461377 HERC2O95714 4834 aa10.26□□□□□ -0.77
CCM2-203ENST00000461377 LRP2P98164 4655 aa10.26□□□□□ -0.77
CCM2-203ENST00000461377 MIR22HGQ0VDD5 57 aa10.26□□□□□ -0.77
CCM2-203ENST00000461377 BIRC6Q9NR09 4857 aa10.26□□□□□ -0.77
CCM2-203ENST00000461377 J3QL48 77 aa10.25□□□□□ -0.77
CCM2-203ENST00000461377 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
CCM2-203ENST00000461377 LPAP08519 4548 aa10.22□□□□□ -0.77
CCM2-203ENST00000461377 S4R3F8 94 aa10.21□□□□□ -0.78
CCM2-203ENST00000461377 A6NN06 94 aa10.17□□□□□ -0.78
CCM2-203ENST00000461377 H1FX-AS1Q4G0G2 97 aa10.17□□□□□ -0.78
CCM2-203ENST00000461377 A0A1B0GU33 70 aa10.12□□□□□ -0.79
CCM2-203ENST00000461377 SEC61BP60468 96 aaKnown RBP10.1□□□□□ -0.79
CCM2-203ENST00000461377 H0YAA0 97 aa10.07□□□□□ -0.8
CCM2-203ENST00000461377 KRTAP10-6P60371 365 aaPredicted RBP10.01□□□□□ -0.81
CCM2-203ENST00000461377 KRTAP3-2Q9BYR7 98 aa9.99□□□□□ -0.81
CCM2-203ENST00000461377 KRTAP4-1Q9BYQ7 146 aa9.94□□□□□ -0.82
CCM2-203ENST00000461377 MUC17Q685J3 4493 aa9.93□□□□□ -0.82
CCM2-203ENST00000461377 CSAG1Q6PB30 78 aa9.9□□□□□ -0.83
CCM2-203ENST00000461377 P0C880 135 aa9.85□□□□□ -0.83
CCM2-203ENST00000461377 ADM2Q7Z4H4 148 aa9.83□□□□□ -0.84
CCM2-203ENST00000461377 KRTAP13-4Q3LI77 160 aa9.81□□□□□ -0.84
CCM2-203ENST00000461377 H3BS24 57 aa9.77□□□□□ -0.85
CCM2-203ENST00000461377 KRTAP19-2Q3LHN2 52 aa9.75□□□□□ -0.85
CCM2-203ENST00000461377 PCLOQ9Y6V0 5065 aa9.74□□□□□ -0.85
CCM2-203ENST00000461377 LINC01554Q52M75 96 aa9.72□□□□□ -0.85
CCM2-203ENST00000461377 HMCN2Q8NDA2 5059 aa9.68□□□□□ -0.86
CCM2-203ENST00000461377 K7ERS5 55 aa9.66□□□□□ -0.86
CCM2-203ENST00000461377 HERC1Q15751 4861 aa9.65□□□□□ -0.86
CCM2-203ENST00000461377 A0A0D9SG42 100 aa9.64□□□□□ -0.87
CCM2-203ENST00000461377 PRAC1Q96KF2 57 aa9.61□□□□□ -0.87
CCM2-203ENST00000461377 M0QZ58 72 aa9.59□□□□□ -0.87
CCM2-203ENST00000461377 MUC2Q02817 5179 aa9.46□□□□□ -0.9
CCM2-203ENST00000461377 KRTAP12-2P59991 146 aa9.45□□□□□ -0.9
CCM2-203ENST00000461377 KRTAP12-1P59990 96 aa9.44□□□□□ -0.9
CCM2-203ENST00000461377 FLGP20930 4061 aaPredicted RBP9.44□□□□□ -0.9
CCM2-203ENST00000461377 R4GN34 69 aa9.41□□□□□ -0.9
CCM2-203ENST00000461377 LORP23490 312 aaPredicted RBP9.39□□□□□ -0.91
CCM2-203ENST00000461377 ROMO1P60602 79 aa9.39□□□□□ -0.91
CCM2-203ENST00000461377 SPINT4Q6UDR6 99 aa9.37□□□□□ -0.91
CCM2-203ENST00000461377 LCE2CQ5TA81 110 aa9.33□□□□□ -0.92
CCM2-203ENST00000461377 KRTAP25-1Q3LHN0 102 aa9.25□□□□□ -0.93
CCM2-203ENST00000461377 RNF213Q63HN8 5207 aa9.2□□□□□ -0.94
CCM2-203ENST00000461377 CRIPTQ9P021 101 aa9.17□□□□□ -0.94
CCM2-203ENST00000461377 UBR4Q5T4S7 5183 aa9.15□□□□□ -0.95
CCM2-203ENST00000461377 MT1HP80294 61 aa9.1□□□□□ -0.95
CCM2-203ENST00000461377 FAT4Q6V0I7 4981 aa9.06□□□□□ -0.96
CCM2-203ENST00000461377 M0R2T5 61 aa9.01□□□□□ -0.97
CCM2-203ENST00000461377 C10orf95Q9H7T3 257 aa8.97□□□□□ -0.97
CCM2-203ENST00000461377 SPRR2GQ9BYE4 73 aa8.88□□□□□ -0.99
CCM2-203ENST00000461377 CAMK2N1Q7Z7J9 78 aa8.87□□□□□ -0.99
CCM2-203ENST00000461377 MT2AP02795 61 aa8.85□□□□□ -0.99
CCM2-203ENST00000461377 KRTAP19-1Q8IUB9 90 aa8.83□□□□□ -1
CCM2-203ENST00000461377 KRTAP9-8Q9BYQ0 159 aa8.83□□□□□ -1
CCM2-203ENST00000461377 MT1FP04733 61 aa8.82□□□□□ -1
CCM2-203ENST00000461377 KRTAP10-10P60014 251 aa8.77□□□□□ -1
CCM2-203ENST00000461377 PLAC4Q8WY50 150 aa8.66□□□□□ -1.02
CCM2-203ENST00000461377 KRTAP19-8Q3LI54 63 aa8.58□□□□□ -1.04
CCM2-203ENST00000461377 TNP1P09430 55 aa8.52□□□□□ -1.05
CCM2-203ENST00000461377 PP632Q6XCG6 107 aa8.5□□□□□ -1.05
CCM2-203ENST00000461377 KRTAP9-3Q9BYQ3 159 aa8.5□□□□□ -1.05
CCM2-203ENST00000461377 A0A0A0MQY5 61 aa8.49□□□□□ -1.05
CCM2-203ENST00000461377 MT1BP07438 61 aa8.46□□□□□ -1.06
CCM2-203ENST00000461377 LCE2AQ5TA79 106 aaPredicted RBP8.41□□□□□ -1.06
CCM2-203ENST00000461377 KRTAP15-1Q3LI76 137 aa8.39□□□□□ -1.07
CCM2-203ENST00000461377 KRTAP23-1A1A580 65 aa8.39□□□□□ -1.07
CCM2-203ENST00000461377 NDUFAF8A1L188 74 aa8.33□□□□□ -1.08
CCM2-203ENST00000461377 KRTAP10-5P60370 271 aa8.28□□□□□ -1.08
CCM2-203ENST00000461377 MT1XP80297 61 aa8.28□□□□□ -1.08
CCM2-203ENST00000461377 LCE2BO14633 110 aa8.19□□□□□ -1.1
CCM2-203ENST00000461377 LCE3AQ5TA76 89 aa8.12□□□□□ -1.11
CCM2-203ENST00000461377 PRO2289Q9P1D8 64 aa8.06□□□□□ -1.12
CCM2-203ENST00000461377 LUZP6Q538Z0 58 aa8.04□□□□□ -1.12
CCM2-203ENST00000461377 KRTAP10-7P60409 375 aaPredicted RBP7.98□□□□□ -1.13
CCM2-203ENST00000461377 KRTAP10-12P60413 245 aa7.97□□□□□ -1.13
CCM2-203ENST00000461377 KRTAP8-1Q8IUC2 63 aa7.96□□□□□ -1.14
CCM2-203ENST00000461377 USH2AO75445 5202 aa7.88□□□□□ -1.15
CCM2-203ENST00000461377 SPRR5A0A1B0GTR4 108 aa7.77□□□□□ -1.17
CCM2-203ENST00000461377 KRTAP12-3P60328 96 aa7.76□□□□□ -1.17
CCM2-203ENST00000461377 SSPOA2VEC9 5147 aa7.59□□□□□ -1.19
CCM2-203ENST00000461377 KRTAP19-5Q3LI72 72 aa7.58□□□□□ -1.2
CCM2-203ENST00000461377 KRTAP4-8A0A0G2JLE6 195 aa7.55□□□□□ -1.2
CCM2-203ENST00000461377 KRTAP19-6Q3LI70 58 aa7.55□□□□□ -1.2
CCM2-203ENST00000461377 KRTAP4-8Q9BYQ9 185 aa7.55□□□□□ -1.2
CCM2-203ENST00000461377 KMT2DO14686 5537 aa7.45□□□□□ -1.22
CCM2-203ENST00000461377 LCE2DQ5TA82 110 aaPredicted RBP7.44□□□□□ -1.22
CCM2-203ENST00000461377 KRTAP19-7Q3SYF9 63 aa7.39□□□□□ -1.23
CCM2-203ENST00000461377 LCE3CQ5T5A8 94 aa7.28□□□□□ -1.24
CCM2-203ENST00000461377 MT1EP04732 61 aa7.22□□□□□ -1.25
CCM2-203ENST00000461377 FSIP2Q5CZC0 6907 aa7.2□□□□□ -1.26
CCM2-203ENST00000461377 KRTAP19-4Q3LI73 84 aa7.14□□□□□ -1.27
CCM2-203ENST00000461377 MT1LQ93083 61 aa7.14□□□□□ -1.27
CCM2-203ENST00000461377 FCGBPQ9Y6R7 5405 aaPredicted RBP7.12□□□□□ -1.27
CCM2-203ENST00000461377 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
CCM2-203ENST00000461377 INE1O15225 51 aa7□□□□□ -1.29
CCM2-203ENST00000461377 KRTAP9-6A8MVA2 160 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms