RNA–Protein interactions for RNA: ENST00000461065.1

AGAP3-203, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best)

Gene AGAP3, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-203ENST00000461065 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
AGAP3-203ENST00000461065 XP32Q5T750 250 aa8.43□□□□□ -1.06
AGAP3-203ENST00000461065 A6NN06 94 aa8.4□□□□□ -1.07
AGAP3-203ENST00000461065 UQCR11O14957 56 aa8.4□□□□□ -1.07
AGAP3-203ENST00000461065 SEC61GP60059 68 aa8.38□□□□□ -1.07
AGAP3-203ENST00000461065 RPL37P61927 97 aaKnown RBP8.37□□□□□ -1.07
AGAP3-203ENST00000461065 SPATA8Q6RVD6 105 aa8.37□□□□□ -1.07
AGAP3-203ENST00000461065 KTN1-AS1Q86SY8 53 aa8.36□□□□□ -1.07
AGAP3-203ENST00000461065 MIR22HGQ0VDD5 57 aa8.35□□□□□ -1.07
AGAP3-203ENST00000461065 LPAP08519 4548 aa8.32□□□□□ -1.08
AGAP3-203ENST00000461065 COX6B2Q6YFQ2 88 aa8.32□□□□□ -1.08
AGAP3-203ENST00000461065 KRTAP3-1Q9BYR8 98 aa8.32□□□□□ -1.08
AGAP3-203ENST00000461065 HMCN2Q8NDA2 5059 aa8.25□□□□□ -1.09
AGAP3-203ENST00000461065 SEC61BP60468 96 aaKnown RBP8.23□□□□□ -1.09
AGAP3-203ENST00000461065 LRP2P98164 4655 aa8.22□□□□□ -1.09
AGAP3-203ENST00000461065 A0A1B0GU33 70 aa8.12□□□□□ -1.11
AGAP3-203ENST00000461065 H1FX-AS1Q4G0G2 97 aa8.12□□□□□ -1.11
AGAP3-203ENST00000461065 H0YAA0 97 aa8.09□□□□□ -1.11
AGAP3-203ENST00000461065 UBR4Q5T4S7 5183 aa8.07□□□□□ -1.12
AGAP3-203ENST00000461065 S4R3F8 94 aa8.05□□□□□ -1.12
AGAP3-203ENST00000461065 RBM12B-AS1Q9P1G2 102 aa8.03□□□□□ -1.12
AGAP3-203ENST00000461065 MUC17Q685J3 4493 aa8.02□□□□□ -1.13
AGAP3-203ENST00000461065 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
AGAP3-203ENST00000461065 KRTAP4-1Q9BYQ7 146 aa7.98□□□□□ -1.13
AGAP3-203ENST00000461065 PRAC1Q96KF2 57 aa7.94□□□□□ -1.14
AGAP3-203ENST00000461065 K7ERS5 55 aa7.92□□□□□ -1.14
AGAP3-203ENST00000461065 ADM2Q7Z4H4 148 aa7.91□□□□□ -1.14
AGAP3-203ENST00000461065 KRTAP10-6P60371 365 aaPredicted RBP7.89□□□□□ -1.15
AGAP3-203ENST00000461065 MUC2Q02817 5179 aa7.87□□□□□ -1.15
AGAP3-203ENST00000461065 RNF213Q63HN8 5207 aa7.86□□□□□ -1.15
AGAP3-203ENST00000461065 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
AGAP3-203ENST00000461065 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
AGAP3-203ENST00000461065 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
AGAP3-203ENST00000461065 P0C880 135 aa7.75□□□□□ -1.17
AGAP3-203ENST00000461065 KRTAP19-2Q3LHN2 52 aa7.72□□□□□ -1.17
AGAP3-203ENST00000461065 A0A0D9SG42 100 aa7.71□□□□□ -1.18
AGAP3-203ENST00000461065 LINC01554Q52M75 96 aa7.69□□□□□ -1.18
AGAP3-203ENST00000461065 ROMO1P60602 79 aa7.64□□□□□ -1.19
AGAP3-203ENST00000461065 KRTAP25-1Q3LHN0 102 aa7.63□□□□□ -1.19
AGAP3-203ENST00000461065 M0QZ58 72 aa7.62□□□□□ -1.19
AGAP3-203ENST00000461065 LCE2CQ5TA81 110 aa7.61□□□□□ -1.19
AGAP3-203ENST00000461065 FAT4Q6V0I7 4981 aa7.53□□□□□ -1.2
AGAP3-203ENST00000461065 KRTAP12-2P59991 146 aa7.52□□□□□ -1.21
AGAP3-203ENST00000461065 FLGP20930 4061 aaPredicted RBP7.52□□□□□ -1.21
AGAP3-203ENST00000461065 KRTAP12-1P59990 96 aa7.51□□□□□ -1.21
AGAP3-203ENST00000461065 MT1HP80294 61 aa7.5□□□□□ -1.21
AGAP3-203ENST00000461065 SPINT4Q6UDR6 99 aa7.49□□□□□ -1.21
AGAP3-203ENST00000461065 M0R2T5 61 aa7.48□□□□□ -1.21
AGAP3-203ENST00000461065 R4GN34 69 aa7.44□□□□□ -1.22
AGAP3-203ENST00000461065 CRIPTQ9P021 101 aa7.44□□□□□ -1.22
AGAP3-203ENST00000461065 LCE2AQ5TA79 106 aaPredicted RBP7.41□□□□□ -1.22
AGAP3-203ENST00000461065 LORP23490 312 aaPredicted RBP7.26□□□□□ -1.25
AGAP3-203ENST00000461065 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
AGAP3-203ENST00000461065 KRTAP9-8Q9BYQ0 159 aa7.2□□□□□ -1.26
AGAP3-203ENST00000461065 MT2AP02795 61 aa7.16□□□□□ -1.26
AGAP3-203ENST00000461065 KRTAP10-10P60014 251 aa7.15□□□□□ -1.27
AGAP3-203ENST00000461065 MT1FP04733 61 aa7.11□□□□□ -1.27
AGAP3-203ENST00000461065 KRTAP9-2Q9BYQ4 174 aa7.09□□□□□ -1.27
AGAP3-203ENST00000461065 CAMK2N1Q7Z7J9 78 aa7.05□□□□□ -1.28
AGAP3-203ENST00000461065 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
AGAP3-203ENST00000461065 KRTAP19-1Q8IUB9 90 aa6.94□□□□□ -1.3
AGAP3-203ENST00000461065 KRTAP9-3Q9BYQ3 159 aa6.94□□□□□ -1.3
AGAP3-203ENST00000461065 LCE2DQ5TA82 110 aaPredicted RBP6.9□□□□□ -1.3
AGAP3-203ENST00000461065 PP632Q6XCG6 107 aa6.9□□□□□ -1.31
AGAP3-203ENST00000461065 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
AGAP3-203ENST00000461065 KRTAP9-6A0A140TA67 174 aa6.8□□□□□ -1.32
AGAP3-203ENST00000461065 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
AGAP3-203ENST00000461065 TNP1P09430 55 aa6.79□□□□□ -1.32
AGAP3-203ENST00000461065 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
AGAP3-203ENST00000461065 LCE2BO14633 110 aa6.76□□□□□ -1.33
AGAP3-203ENST00000461065 FSIP2Q5CZC0 6907 aa6.76□□□□□ -1.33
AGAP3-203ENST00000461065 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.34
AGAP3-203ENST00000461065 H3BS24 57 aa6.71□□□□□ -1.34
AGAP3-203ENST00000461065 MT1BP07438 61 aa6.7□□□□□ -1.34
AGAP3-203ENST00000461065 CRCT1Q9UGL9 99 aa6.7□□□□□ -1.34
AGAP3-203ENST00000461065 NDUFAF8A1L188 74 aa6.62□□□□□ -1.35
AGAP3-203ENST00000461065 USH2AO75445 5202 aa6.6□□□□□ -1.35
AGAP3-203ENST00000461065 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
AGAP3-203ENST00000461065 MT1XP80297 61 aa6.46□□□□□ -1.38
AGAP3-203ENST00000461065 SSPOA2VEC9 5147 aa6.45□□□□□ -1.38
AGAP3-203ENST00000461065 KRTAP10-5P60370 271 aa6.45□□□□□ -1.38
AGAP3-203ENST00000461065 KRTAP19-6Q3LI70 58 aa6.42□□□□□ -1.38
AGAP3-203ENST00000461065 LUZP6Q538Z0 58 aa6.4□□□□□ -1.38
AGAP3-203ENST00000461065 LCE3AQ5TA76 89 aa6.39□□□□□ -1.39
AGAP3-203ENST00000461065 FCGBPQ9Y6R7 5405 aaPredicted RBP6.31□□□□□ -1.4
AGAP3-203ENST00000461065 SPRR5A0A1B0GTR4 108 aa6.29□□□□□ -1.4
AGAP3-203ENST00000461065 KRTAP8-1Q8IUC2 63 aa6.26□□□□□ -1.41
AGAP3-203ENST00000461065 KRTAP10-12P60413 245 aa6.25□□□□□ -1.41
AGAP3-203ENST00000461065 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.25□□□□□ -1.41
AGAP3-203ENST00000461065 KRTAP10-7P60409 375 aaPredicted RBP6.19□□□□□ -1.42
AGAP3-203ENST00000461065 KRTAP9-7A8MTY7 169 aa6.13□□□□□ -1.43
AGAP3-203ENST00000461065 KRTAP12-3P60328 96 aa6.11□□□□□ -1.43
AGAP3-203ENST00000461065 MACF1Q9UPN3 7388 aaKnown RBP6.1□□□□□ -1.43
AGAP3-203ENST00000461065 SYNE2Q8WXH0 6885 aaKnown RBP5.99□□□□□ -1.45
AGAP3-203ENST00000461065 KRTAP4-8A0A0G2JLE6 195 aa5.98□□□□□ -1.45
AGAP3-203ENST00000461065 KRTAP4-8Q9BYQ9 185 aa5.98□□□□□ -1.45
AGAP3-203ENST00000461065 KMT2DO14686 5537 aa5.97□□□□□ -1.45
AGAP3-203ENST00000461065 A0A0A0MQY5 61 aa5.96□□□□□ -1.45
AGAP3-203ENST00000461065 KRTAP19-5Q3LI72 72 aa5.88□□□□□ -1.47
AGAP3-203ENST00000461065 KRTAP6-3Q3LI67 103 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms