RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 TPRXLQ17RH7 258 aa6.18□□□□□ -1.42
DDX39B-214ENST00000458640 LUZP6Q538Z0 58 aa6.18□□□□□ -1.42
DDX39B-214ENST00000458640 VPS13BQ7Z7G8 4022 aa6.18□□□□□ -1.42
DDX39B-214ENST00000458640 APOBP04114 4563 aaKnown RBP6.17□□□□□ -1.42
DDX39B-214ENST00000458640 RPL37P61927 97 aaKnown RBP6.16□□□□□ -1.42
DDX39B-214ENST00000458640 RPS29P62273 56 aaKnown RBP6.15□□□□□ -1.42
DDX39B-214ENST00000458640 Q5VSD8 79 aa6.15□□□□□ -1.43
DDX39B-214ENST00000458640 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
DDX39B-214ENST00000458640 Q8N1X5 172 aa6.13□□□□□ -1.43
DDX39B-214ENST00000458640 SEC61BP60468 96 aaKnown RBP6.08□□□□□ -1.44
DDX39B-214ENST00000458640 FAT1Q14517 4588 aa6.07□□□□□ -1.44
DDX39B-214ENST00000458640 KIAA1109Q2LD37 5005 aa6.06□□□□□ -1.44
DDX39B-214ENST00000458640 FLG2Q5D862 2391 aaPredicted RBP6.03□□□□□ -1.44
DDX39B-214ENST00000458640 LCE2DQ5TA82 110 aaPredicted RBP6.03□□□□□ -1.44
DDX39B-214ENST00000458640 HSPG2P98160 4391 aa6.01□□□□□ -1.45
DDX39B-214ENST00000458640 PCLOQ9Y6V0 5065 aa5.99□□□□□ -1.45
DDX39B-214ENST00000458640 KRTAP10-8P60410 259 aa5.98□□□□□ -1.45
DDX39B-214ENST00000458640 RYR1P21817 5038 aa5.97□□□□□ -1.45
DDX39B-214ENST00000458640 PKHD1L1Q86WI1 4243 aa5.97□□□□□ -1.45
DDX39B-214ENST00000458640 HERC2O95714 4834 aa5.96□□□□□ -1.46
DDX39B-214ENST00000458640 KRTAP3-1Q9BYR8 98 aa5.96□□□□□ -1.46
DDX39B-214ENST00000458640 KRTAP17-1Q9BYP8 105 aa5.95□□□□□ -1.46
DDX39B-214ENST00000458640 C10orf95Q9H7T3 257 aa5.95□□□□□ -1.46
DDX39B-214ENST00000458640 ABCA13Q86UQ4 5058 aa5.9□□□□□ -1.46
DDX39B-214ENST00000458640 XP32Q5T750 250 aa5.89□□□□□ -1.47
DDX39B-214ENST00000458640 KRTAP4-5Q9BYR2 181 aa5.88□□□□□ -1.47
DDX39B-214ENST00000458640 KRTAP10-6P60371 365 aaPredicted RBP5.87□□□□□ -1.47
DDX39B-214ENST00000458640 S4R3F8 94 aa5.87□□□□□ -1.47
DDX39B-214ENST00000458640 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
DDX39B-214ENST00000458640 C9orf92A6NGG3 77 aa5.86□□□□□ -1.47
DDX39B-214ENST00000458640 LRP1Q07954 4544 aaKnown RBP5.83□□□□□ -1.48
DDX39B-214ENST00000458640 TNXBP22105 4242 aa5.82□□□□□ -1.48
DDX39B-214ENST00000458640 KRTAP13-4Q3LI77 160 aa5.81□□□□□ -1.48
DDX39B-214ENST00000458640 A0A0D9SG42 100 aa5.81□□□□□ -1.48
DDX39B-214ENST00000458640 FAT3Q8TDW7 4589 aa5.8□□□□□ -1.48
DDX39B-214ENST00000458640 DMBT1Q9UGM3 2413 aaPredicted RBP5.78□□□□□ -1.48
DDX39B-214ENST00000458640 CAMK2N1Q7Z7J9 78 aa5.77□□□□□ -1.49
DDX39B-214ENST00000458640 PLAC4Q8WY50 150 aa5.77□□□□□ -1.49
DDX39B-214ENST00000458640 MYCBP2O75592 4640 aa5.76□□□□□ -1.49
DDX39B-214ENST00000458640 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
DDX39B-214ENST00000458640 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
DDX39B-214ENST00000458640 HERC1Q15751 4861 aa5.66□□□□□ -1.5
DDX39B-214ENST00000458640 M0QZ58 72 aa5.64□□□□□ -1.51
DDX39B-214ENST00000458640 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
DDX39B-214ENST00000458640 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
DDX39B-214ENST00000458640 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
DDX39B-214ENST00000458640 LRP2P98164 4655 aa5.42□□□□□ -1.54
DDX39B-214ENST00000458640 LPAP08519 4548 aa5.42□□□□□ -1.54
DDX39B-214ENST00000458640 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
DDX39B-214ENST00000458640 UBR4Q5T4S7 5183 aa5.38□□□□□ -1.55
DDX39B-214ENST00000458640 INE1O15225 51 aa5.35□□□□□ -1.55
DDX39B-214ENST00000458640 LCE2AQ5TA79 106 aaPredicted RBP5.35□□□□□ -1.55
DDX39B-214ENST00000458640 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
DDX39B-214ENST00000458640 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
DDX39B-214ENST00000458640 LCE2BO14633 110 aa5.3□□□□□ -1.56
DDX39B-214ENST00000458640 KRTAP4-1Q9BYQ7 146 aa5.28□□□□□ -1.56
DDX39B-214ENST00000458640 RNF213Q63HN8 5207 aa5.27□□□□□ -1.57
DDX39B-214ENST00000458640 MUC17Q685J3 4493 aa5.25□□□□□ -1.57
DDX39B-214ENST00000458640 R4GN34 69 aa5.21□□□□□ -1.57
DDX39B-214ENST00000458640 KRTAP19-2Q3LHN2 52 aa5.15□□□□□ -1.58
DDX39B-214ENST00000458640 MUC2Q02817 5179 aa5.14□□□□□ -1.59
DDX39B-214ENST00000458640 LORP23490 312 aaPredicted RBP5.13□□□□□ -1.59
DDX39B-214ENST00000458640 TNP1P09430 55 aa5□□□□□ -1.61
DDX39B-214ENST00000458640 M0R2T5 61 aa4.97□□□□□ -1.61
DDX39B-214ENST00000458640 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.62
DDX39B-214ENST00000458640 MT1HP80294 61 aa4.94□□□□□ -1.62
DDX39B-214ENST00000458640 FAT4Q6V0I7 4981 aa4.9□□□□□ -1.63
DDX39B-214ENST00000458640 MT2AP02795 61 aa4.76□□□□□ -1.65
DDX39B-214ENST00000458640 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
DDX39B-214ENST00000458640 KRTAP9-8Q9BYQ0 159 aa4.75□□□□□ -1.65
DDX39B-214ENST00000458640 MT1FP04733 61 aa4.73□□□□□ -1.65
DDX39B-214ENST00000458640 SPRR2GQ9BYE4 73 aa4.73□□□□□ -1.65
DDX39B-214ENST00000458640 KRTAP19-1Q8IUB9 90 aa4.67□□□□□ -1.66
DDX39B-214ENST00000458640 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
DDX39B-214ENST00000458640 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
DDX39B-214ENST00000458640 KRTAP19-8Q3LI54 63 aa4.58□□□□□ -1.68
DDX39B-214ENST00000458640 KRTAP9-3Q9BYQ3 159 aa4.58□□□□□ -1.68
DDX39B-214ENST00000458640 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
DDX39B-214ENST00000458640 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
DDX39B-214ENST00000458640 MT1BP07438 61 aa4.49□□□□□ -1.69
DDX39B-214ENST00000458640 KRTAP10-12P60413 245 aa4.42□□□□□ -1.7
DDX39B-214ENST00000458640 KRTAP9-6A0A140TA67 174 aa4.39□□□□□ -1.71
DDX39B-214ENST00000458640 MT1XP80297 61 aa4.37□□□□□ -1.71
DDX39B-214ENST00000458640 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
DDX39B-214ENST00000458640 USH2AO75445 5202 aa4.36□□□□□ -1.71
DDX39B-214ENST00000458640 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
DDX39B-214ENST00000458640 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
DDX39B-214ENST00000458640 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
DDX39B-214ENST00000458640 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
DDX39B-214ENST00000458640 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
DDX39B-214ENST00000458640 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
DDX39B-214ENST00000458640 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
DDX39B-214ENST00000458640 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
DDX39B-214ENST00000458640 KRTAP19-6Q3LI70 58 aa4.17□□□□□ -1.74
DDX39B-214ENST00000458640 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.75
DDX39B-214ENST00000458640 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
DDX39B-214ENST00000458640 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.75
DDX39B-214ENST00000458640 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
DDX39B-214ENST00000458640 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.75
DDX39B-214ENST00000458640 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms