RNA–Protein interactions for RNA: ENST00000458477.6

PXN-206, Transcript of paxillin, humanhuman

TSL 1 (best) BASIC

Gene PXN, Length 3,807 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-206ENST00000458477 FAT1Q14517 4588 aa5.41□□□□□ -1.54
PXN-206ENST00000458477 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.55
PXN-206ENST00000458477 VPS13BQ7Z7G8 4022 aa5.39□□□□□ -1.55
PXN-206ENST00000458477 SEC61BP60468 96 aaKnown RBP5.38□□□□□ -1.55
PXN-206ENST00000458477 KRTAP10-4P60372 401 aaPredicted RBP5.37□□□□□ -1.55
PXN-206ENST00000458477 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
PXN-206ENST00000458477 NDUFAF8A1L188 74 aa5.36□□□□□ -1.55
PXN-206ENST00000458477 TPRXLQ17RH7 258 aa5.34□□□□□ -1.55
PXN-206ENST00000458477 KRTAP3-3Q9BYR6 98 aa5.33□□□□□ -1.56
PXN-206ENST00000458477 KRTAP12-2P59991 146 aa5.33□□□□□ -1.56
PXN-206ENST00000458477 DYNC1H1Q14204 4646 aaKnown RBP5.31□□□□□ -1.56
PXN-206ENST00000458477 CAMK2N1Q7Z7J9 78 aa5.31□□□□□ -1.56
PXN-206ENST00000458477 KRTAP3-2Q9BYR7 98 aa5.3□□□□□ -1.56
PXN-206ENST00000458477 KRTAP12-1P59990 96 aa5.26□□□□□ -1.57
PXN-206ENST00000458477 HYDINQ4G0P3 5121 aa5.26□□□□□ -1.57
PXN-206ENST00000458477 KRTAP4-5Q9BYR2 181 aa5.24□□□□□ -1.57
PXN-206ENST00000458477 SACSQ9NZJ4 4579 aa5.24□□□□□ -1.57
PXN-206ENST00000458477 PKHD1P08F94 4074 aa5.23□□□□□ -1.57
PXN-206ENST00000458477 MYCBP2O75592 4640 aa5.21□□□□□ -1.57
PXN-206ENST00000458477 M0R2T5 61 aa5.21□□□□□ -1.58
PXN-206ENST00000458477 MT1HL1P0DM35 61 aa5.2□□□□□ -1.58
PXN-206ENST00000458477 KIAA1109Q2LD37 5005 aa5.18□□□□□ -1.58
PXN-206ENST00000458477 LUZP6Q538Z0 58 aa5.18□□□□□ -1.58
PXN-206ENST00000458477 FAT2Q9NYQ8 4349 aa5.17□□□□□ -1.58
PXN-206ENST00000458477 PKD1P98161 4303 aa5.15□□□□□ -1.58
PXN-206ENST00000458477 KMT2CQ8NEZ4 4911 aaKnown RBP5.15□□□□□ -1.59
PXN-206ENST00000458477 LRP1Q07954 4544 aaKnown RBP5.14□□□□□ -1.59
PXN-206ENST00000458477 RYR3Q15413 4870 aa5.12□□□□□ -1.59
PXN-206ENST00000458477 RYR2Q92736 4967 aa5.11□□□□□ -1.59
PXN-206ENST00000458477 APOBP04114 4563 aaKnown RBP5.1□□□□□ -1.59
PXN-206ENST00000458477 RYR1P21817 5038 aa5.08□□□□□ -1.6
PXN-206ENST00000458477 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
PXN-206ENST00000458477 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
PXN-206ENST00000458477 KRTAP17-1Q9BYP8 105 aa5.01□□□□□ -1.61
PXN-206ENST00000458477 FAT3Q8TDW7 4589 aa5□□□□□ -1.61
PXN-206ENST00000458477 LORP23490 312 aaPredicted RBP4.94□□□□□ -1.62
PXN-206ENST00000458477 HSPG2P98160 4391 aa4.93□□□□□ -1.62
PXN-206ENST00000458477 TNP1P09430 55 aa4.93□□□□□ -1.62
PXN-206ENST00000458477 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
PXN-206ENST00000458477 LRP2P98164 4655 aa4.9□□□□□ -1.62
PXN-206ENST00000458477 PKHD1L1Q86WI1 4243 aa4.88□□□□□ -1.63
PXN-206ENST00000458477 EPPK1P58107 5090 aaKnown RBP4.85□□□□□ -1.63
PXN-206ENST00000458477 HERC2O95714 4834 aa4.85□□□□□ -1.63
PXN-206ENST00000458477 KRTAP4-1Q9BYQ7 146 aa4.79□□□□□ -1.64
PXN-206ENST00000458477 TNXBP22105 4242 aa4.78□□□□□ -1.64
PXN-206ENST00000458477 BIRC6Q9NR09 4857 aa4.77□□□□□ -1.65
PXN-206ENST00000458477 KRTAP10-10P60014 251 aa4.73□□□□□ -1.65
PXN-206ENST00000458477 LPAP08519 4548 aa4.73□□□□□ -1.65
PXN-206ENST00000458477 ABCA13Q86UQ4 5058 aa4.66□□□□□ -1.66
PXN-206ENST00000458477 HERC1Q15751 4861 aa4.47□□□□□ -1.69
PXN-206ENST00000458477 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
PXN-206ENST00000458477 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
PXN-206ENST00000458477 PCLOQ9Y6V0 5065 aa4.43□□□□□ -1.7
PXN-206ENST00000458477 KRTAP19-2Q3LHN2 52 aa4.43□□□□□ -1.7
PXN-206ENST00000458477 MT1HP80294 61 aa4.41□□□□□ -1.7
PXN-206ENST00000458477 MUC2Q02817 5179 aa4.41□□□□□ -1.7
PXN-206ENST00000458477 SPRR2GQ9BYE4 73 aa4.37□□□□□ -1.71
PXN-206ENST00000458477 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
PXN-206ENST00000458477 PRO2289Q9P1D8 64 aa4.36□□□□□ -1.71
PXN-206ENST00000458477 KRTAP19-1Q8IUB9 90 aa4.34□□□□□ -1.71
PXN-206ENST00000458477 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
PXN-206ENST00000458477 RNF213Q63HN8 5207 aa4.3□□□□□ -1.72
PXN-206ENST00000458477 MT2AP02795 61 aa4.3□□□□□ -1.72
PXN-206ENST00000458477 MT1FP04733 61 aa4.3□□□□□ -1.72
PXN-206ENST00000458477 KRTAP12-3P60328 96 aa4.3□□□□□ -1.72
PXN-206ENST00000458477 FLGP20930 4061 aaPredicted RBP4.3□□□□□ -1.72
PXN-206ENST00000458477 UBR4Q5T4S7 5183 aa4.27□□□□□ -1.73
PXN-206ENST00000458477 LCE2CQ5TA81 110 aa4.27□□□□□ -1.73
PXN-206ENST00000458477 HMCN2Q8NDA2 5059 aa4.26□□□□□ -1.73
PXN-206ENST00000458477 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
PXN-206ENST00000458477 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
PXN-206ENST00000458477 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
PXN-206ENST00000458477 INE1O15225 51 aa4.16□□□□□ -1.74
PXN-206ENST00000458477 FSIP2Q5CZC0 6907 aa4.16□□□□□ -1.74
PXN-206ENST00000458477 KRTAP9-8Q9BYQ0 159 aa4.13□□□□□ -1.75
PXN-206ENST00000458477 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
PXN-206ENST00000458477 MT1XP80297 61 aa4.11□□□□□ -1.75
PXN-206ENST00000458477 MT1BP07438 61 aa4.1□□□□□ -1.75
PXN-206ENST00000458477 KRTAP10-5P60370 271 aa4.1□□□□□ -1.75
PXN-206ENST00000458477 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.75
PXN-206ENST00000458477 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
PXN-206ENST00000458477 KRTAP9-3Q9BYQ3 159 aa3.99□□□□□ -1.77
PXN-206ENST00000458477 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
PXN-206ENST00000458477 LCE2AQ5TA79 106 aaPredicted RBP3.93□□□□□ -1.78
PXN-206ENST00000458477 LCE2BO14633 110 aa3.89□□□□□ -1.79
PXN-206ENST00000458477 KRTAP4-8A0A0G2JLE6 195 aa3.88□□□□□ -1.79
PXN-206ENST00000458477 KRTAP4-8Q9BYQ9 185 aa3.88□□□□□ -1.79
PXN-206ENST00000458477 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
PXN-206ENST00000458477 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
PXN-206ENST00000458477 USH2AO75445 5202 aa3.74□□□□□ -1.81
PXN-206ENST00000458477 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
PXN-206ENST00000458477 KMT2DO14686 5537 aa3.72□□□□□ -1.81
PXN-206ENST00000458477 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
PXN-206ENST00000458477 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
PXN-206ENST00000458477 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
PXN-206ENST00000458477 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
PXN-206ENST00000458477 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
PXN-206ENST00000458477 MT1LQ93083 61 aa3.6□□□□□ -1.83
PXN-206ENST00000458477 LCE2DQ5TA82 110 aaPredicted RBP3.59□□□□□ -1.83
PXN-206ENST00000458477 MT1EP04732 61 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms