RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 SPINT4Q6UDR6 99 aa1.7□□□□□ -2.14
HMGN1P18-201ENST00000457642 DNHD1Q96M86 4753 aa1.7□□□□□ -2.14
HMGN1P18-201ENST00000457642 M0QZ58 72 aa1.69□□□□□ -2.14
HMGN1P18-201ENST00000457642 KRTAP10-6P60371 365 aaPredicted RBP1.69□□□□□ -2.14
HMGN1P18-201ENST00000457642 KRTAP3-3Q9BYR6 98 aa1.69□□□□□ -2.14
HMGN1P18-201ENST00000457642 PKHD1P08F94 4074 aa1.68□□□□□ -2.14
HMGN1P18-201ENST00000457642 DMBT1Q9UGM3 2413 aaPredicted RBP1.68□□□□□ -2.14
HMGN1P18-201ENST00000457642 KRTAP3-2Q9BYR7 98 aa1.68□□□□□ -2.14
HMGN1P18-201ENST00000457642 TPRXLQ17RH7 258 aa1.67□□□□□ -2.14
HMGN1P18-201ENST00000457642 KRTAP13-4Q3LI77 160 aa1.67□□□□□ -2.14
HMGN1P18-201ENST00000457642 FAT1Q14517 4588 aa1.67□□□□□ -2.14
HMGN1P18-201ENST00000457642 FAT3Q8TDW7 4589 aa1.66□□□□□ -2.14
HMGN1P18-201ENST00000457642 P0C880 135 aa1.66□□□□□ -2.14
HMGN1P18-201ENST00000457642 TNXBP22105 4242 aa1.65□□□□□ -2.15
HMGN1P18-201ENST00000457642 SEC61BP60468 96 aaKnown RBP1.65□□□□□ -2.15
HMGN1P18-201ENST00000457642 KRTAP12-2P59991 146 aa1.64□□□□□ -2.15
HMGN1P18-201ENST00000457642 R4GN34 69 aa1.64□□□□□ -2.15
HMGN1P18-201ENST00000457642 RYR2Q92736 4967 aa1.64□□□□□ -2.15
HMGN1P18-201ENST00000457642 MT1HL1P0DM35 61 aa1.63□□□□□ -2.15
HMGN1P18-201ENST00000457642 KRTAP12-1P59990 96 aa1.63□□□□□ -2.15
HMGN1P18-201ENST00000457642 HSPG2P98160 4391 aa1.63□□□□□ -2.15
HMGN1P18-201ENST00000457642 LRP1Q07954 4544 aaKnown RBP1.62□□□□□ -2.15
HMGN1P18-201ENST00000457642 C10orf95Q9H7T3 257 aa1.62□□□□□ -2.15
HMGN1P18-201ENST00000457642 J3QL48 77 aa1.6□□□□□ -2.15
HMGN1P18-201ENST00000457642 RYR1P21817 5038 aa1.6□□□□□ -2.15
HMGN1P18-201ENST00000457642 KRTAP15-1Q3LI76 137 aa1.59□□□□□ -2.15
HMGN1P18-201ENST00000457642 NDUFAF8A1L188 74 aa1.58□□□□□ -2.16
HMGN1P18-201ENST00000457642 PP632Q6XCG6 107 aa1.58□□□□□ -2.16
HMGN1P18-201ENST00000457642 CAMK2N1Q7Z7J9 78 aa1.58□□□□□ -2.16
HMGN1P18-201ENST00000457642 MYCBP2O75592 4640 aa1.58□□□□□ -2.16
HMGN1P18-201ENST00000457642 LUZP6Q538Z0 58 aa1.55□□□□□ -2.16
HMGN1P18-201ENST00000457642 PLAC4Q8WY50 150 aa1.55□□□□□ -2.16
HMGN1P18-201ENST00000457642 RYR3Q15413 4870 aa1.53□□□□□ -2.16
HMGN1P18-201ENST00000457642 KMT2CQ8NEZ4 4911 aaKnown RBP1.53□□□□□ -2.16
HMGN1P18-201ENST00000457642 KRTAP17-1Q9BYP8 105 aa1.52□□□□□ -2.17
HMGN1P18-201ENST00000457642 KIAA1109Q2LD37 5005 aa1.52□□□□□ -2.17
HMGN1P18-201ENST00000457642 KRTAP23-1A1A580 65 aa1.51□□□□□ -2.17
HMGN1P18-201ENST00000457642 TNP1P09430 55 aa1.51□□□□□ -2.17
HMGN1P18-201ENST00000457642 A0A0A0MQY5 61 aa1.5□□□□□ -2.17
HMGN1P18-201ENST00000457642 LORP23490 312 aaPredicted RBP1.5□□□□□ -2.17
HMGN1P18-201ENST00000457642 LRP2P98164 4655 aa1.5□□□□□ -2.17
HMGN1P18-201ENST00000457642 MUC17Q685J3 4493 aa1.49□□□□□ -2.17
HMGN1P18-201ENST00000457642 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
HMGN1P18-201ENST00000457642 KRTAP4-5Q9BYR2 181 aa1.48□□□□□ -2.17
HMGN1P18-201ENST00000457642 HERC1Q15751 4861 aa1.46□□□□□ -2.18
HMGN1P18-201ENST00000457642 LPAP08519 4548 aa1.46□□□□□ -2.18
HMGN1P18-201ENST00000457642 KRTAP19-2Q3LHN2 52 aa1.45□□□□□ -2.18
HMGN1P18-201ENST00000457642 M0R2T5 61 aa1.44□□□□□ -2.18
HMGN1P18-201ENST00000457642 EPPK1P58107 5090 aaKnown RBP1.43□□□□□ -2.18
HMGN1P18-201ENST00000457642 FLGP20930 4061 aaPredicted RBP1.43□□□□□ -2.18
HMGN1P18-201ENST00000457642 BIRC6Q9NR09 4857 aa1.43□□□□□ -2.18
HMGN1P18-201ENST00000457642 ABCA13Q86UQ4 5058 aa1.42□□□□□ -2.18
HMGN1P18-201ENST00000457642 SPRR2GQ9BYE4 73 aa1.42□□□□□ -2.18
HMGN1P18-201ENST00000457642 SPRR5A0A1B0GTR4 108 aa1.41□□□□□ -2.18
HMGN1P18-201ENST00000457642 HERC2O95714 4834 aa1.41□□□□□ -2.18
HMGN1P18-201ENST00000457642 KRTAP10-10P60014 251 aa1.39□□□□□ -2.19
HMGN1P18-201ENST00000457642 LCE3AQ5TA76 89 aa1.37□□□□□ -2.19
HMGN1P18-201ENST00000457642 LCE2CQ5TA81 110 aa1.37□□□□□ -2.19
HMGN1P18-201ENST00000457642 KRTAP19-1Q8IUB9 90 aa1.37□□□□□ -2.19
HMGN1P18-201ENST00000457642 MT1HP80294 61 aa1.36□□□□□ -2.19
HMGN1P18-201ENST00000457642 KRTAP19-8Q3LI54 63 aa1.36□□□□□ -2.19
HMGN1P18-201ENST00000457642 PRO2289Q9P1D8 64 aa1.36□□□□□ -2.19
HMGN1P18-201ENST00000457642 MT2AP02795 61 aa1.35□□□□□ -2.19
HMGN1P18-201ENST00000457642 KRTAP8-1Q8IUC2 63 aa1.35□□□□□ -2.19
HMGN1P18-201ENST00000457642 INE1O15225 51 aa1.34□□□□□ -2.19
HMGN1P18-201ENST00000457642 MT1FP04733 61 aa1.34□□□□□ -2.19
HMGN1P18-201ENST00000457642 KRTAP10-12P60413 245 aa1.34□□□□□ -2.19
HMGN1P18-201ENST00000457642 HMCN2Q8NDA2 5059 aa1.34□□□□□ -2.2
HMGN1P18-201ENST00000457642 KRTAP12-3P60328 96 aa1.32□□□□□ -2.2
HMGN1P18-201ENST00000457642 PCLOQ9Y6V0 5065 aa1.32□□□□□ -2.2
HMGN1P18-201ENST00000457642 KRTAP9-8Q9BYQ0 159 aa1.31□□□□□ -2.2
HMGN1P18-201ENST00000457642 MT1BP07438 61 aa1.3□□□□□ -2.2
HMGN1P18-201ENST00000457642 KRTAP10-5P60370 271 aa1.3□□□□□ -2.2
HMGN1P18-201ENST00000457642 MT1XP80297 61 aa1.3□□□□□ -2.2
HMGN1P18-201ENST00000457642 RNF213Q63HN8 5207 aa1.29□□□□□ -2.2
HMGN1P18-201ENST00000457642 MUC2Q02817 5179 aa1.28□□□□□ -2.21
HMGN1P18-201ENST00000457642 KRTAP9-3Q9BYQ3 159 aa1.27□□□□□ -2.21
HMGN1P18-201ENST00000457642 FAT4Q6V0I7 4981 aa1.26□□□□□ -2.21
HMGN1P18-201ENST00000457642 KRTAP10-7P60409 375 aaPredicted RBP1.26□□□□□ -2.21
HMGN1P18-201ENST00000457642 KRTAP19-4Q3LI73 84 aa1.25□□□□□ -2.21
HMGN1P18-201ENST00000457642 LCE3CQ5T5A8 94 aa1.24□□□□□ -2.21
HMGN1P18-201ENST00000457642 KRTAP19-5Q3LI72 72 aa1.23□□□□□ -2.21
HMGN1P18-201ENST00000457642 UBR4Q5T4S7 5183 aa1.23□□□□□ -2.21
HMGN1P18-201ENST00000457642 LCE2BO14633 110 aa1.19□□□□□ -2.22
HMGN1P18-201ENST00000457642 LCE2AQ5TA79 106 aaPredicted RBP1.16□□□□□ -2.22
HMGN1P18-201ENST00000457642 KRTAP2-3P0C7H8 128 aa1.15□□□□□ -2.23
HMGN1P18-201ENST00000457642 KRTAP19-7Q3SYF9 63 aa1.15□□□□□ -2.23
HMGN1P18-201ENST00000457642 MT1LQ93083 61 aa1.15□□□□□ -2.23
HMGN1P18-201ENST00000457642 KRTAP2-4Q9BYR9 128 aa1.15□□□□□ -2.23
HMGN1P18-201ENST00000457642 KRTAP2-1Q9BYU5 128 aa1.15□□□□□ -2.23
HMGN1P18-201ENST00000457642 KRTAP4-8A0A0G2JLE6 195 aa1.14□□□□□ -2.23
HMGN1P18-201ENST00000457642 MT1EP04732 61 aa1.14□□□□□ -2.23
HMGN1P18-201ENST00000457642 KRTAP4-8Q9BYQ9 185 aa1.14□□□□□ -2.23
HMGN1P18-201ENST00000457642 KRTAP9-6A8MVA2 160 aa1.12□□□□□ -2.23
HMGN1P18-201ENST00000457642 KRTAP19-6Q3LI70 58 aa1.11□□□□□ -2.23
HMGN1P18-201ENST00000457642 USH2AO75445 5202 aa1.11□□□□□ -2.23
HMGN1P18-201ENST00000457642 KRTAP4-7Q9BYR0 210 aa1.1□□□□□ -2.23
HMGN1P18-201ENST00000457642 MT1GP13640 62 aa1.08□□□□□ -2.24
HMGN1P18-201ENST00000457642 KRTAP19-3Q7Z4W3 81 aa1.08□□□□□ -2.24
HMGN1P18-201ENST00000457642 MT1MQ8N339 61 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms