RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 IGKV3D-7A0A0C4DH55 119 aa2.89□□□□□ -1.95
HMGB1P4-201ENST00000455362 SPINK1P00995 79 aa2.89□□□□□ -1.95
HMGB1P4-201ENST00000455362 SPAG11AQ6PDA7 123 aa2.89□□□□□ -1.95
HMGB1P4-201ENST00000455362 LINC00304Q8N9R0 145 aa2.89□□□□□ -1.95
HMGB1P4-201ENST00000455362 LINC00472Q9H8W2 130 aa2.89□□□□□ -1.95
HMGB1P4-201ENST00000455362 KLKP1Q107X0 134 aa2.88□□□□□ -1.95
HMGB1P4-201ENST00000455362 ASB16-AS1Q495Z4 193 aa2.88□□□□□ -1.95
HMGB1P4-201ENST00000455362 C7orf65Q6ZTY9 151 aa2.88□□□□□ -1.95
HMGB1P4-201ENST00000455362 Q96NJ1 140 aa2.88□□□□□ -1.95
HMGB1P4-201ENST00000455362 A0A087WVE0 104 aa2.87□□□□□ -1.95
HMGB1P4-201ENST00000455362 MT1HL1P0DM35 61 aa2.87□□□□□ -1.95
HMGB1P4-201ENST00000455362 RPS29P62273 56 aaKnown RBP2.87□□□□□ -1.95
HMGB1P4-201ENST00000455362 ATP5EP2Q5VTU8 51 aa2.87□□□□□ -1.95
HMGB1P4-201ENST00000455362 R4GN34 69 aa2.87□□□□□ -1.95
HMGB1P4-201ENST00000455362 IGKV4-1P06312 121 aa2.86□□□□□ -1.95
HMGB1P4-201ENST00000455362 C20orf197Q8N268 126 aa2.86□□□□□ -1.95
HMGB1P4-201ENST00000455362 LIMD2Q9BT23 127 aa2.86□□□□□ -1.95
HMGB1P4-201ENST00000455362 ATP5EP56381 51 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P4-201ENST00000455362 Q1T7F1 81 aa2.85□□□□□ -1.95
HMGB1P4-201ENST00000455362 K7EQZ3 153 aa2.84□□□□□ -1.95
HMGB1P4-201ENST00000455362 PCLOQ9Y6V0 5065 aa2.84□□□□□ -1.95
HMGB1P4-201ENST00000455362 NDUFB1O75438 58 aa2.83□□□□□ -1.96
HMGB1P4-201ENST00000455362 RETNLBQ9BQ08 111 aa2.82□□□□□ -1.96
HMGB1P4-201ENST00000455362 hDV103S1A0JD37 113 aa2.81□□□□□ -1.96
HMGB1P4-201ENST00000455362 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
HMGB1P4-201ENST00000455362 Q5VV11 94 aa2.81□□□□□ -1.96
HMGB1P4-201ENST00000455362 MMP24-AS1A0A0U1RRL7 71 aa2.8□□□□□ -1.96
HMGB1P4-201ENST00000455362 HCG22E2RYF7 251 aa2.8□□□□□ -1.96
HMGB1P4-201ENST00000455362 HRES1P13985 223 aa2.8□□□□□ -1.96
HMGB1P4-201ENST00000455362 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P4-201ENST00000455362 SNURFQ9Y675 71 aa2.8□□□□□ -1.96
HMGB1P4-201ENST00000455362 TRAV22A0A0B4J277 110 aa2.79□□□□□ -1.96
HMGB1P4-201ENST00000455362 HERC1Q15751 4861 aa2.78□□□□□ -1.96
HMGB1P4-201ENST00000455362 NDUFC1O43677 76 aa2.78□□□□□ -1.96
HMGB1P4-201ENST00000455362 CASC2Q6XLA1 102 aa2.78□□□□□ -1.96
HMGB1P4-201ENST00000455362 ATP11AUNQ6ZP68 121 aa2.78□□□□□ -1.96
HMGB1P4-201ENST00000455362 WFDC13Q8IUB5 93 aa2.78□□□□□ -1.96
HMGB1P4-201ENST00000455362 KRTAP10-6P60371 365 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P4-201ENST00000455362 TMEM254Q8TBM7 123 aa2.76□□□□□ -1.97
HMGB1P4-201ENST00000455362 MRPL34Q9BQ48 92 aaKnown RBP2.76□□□□□ -1.97
HMGB1P4-201ENST00000455362 C9orf92A6NGG3 77 aa2.75□□□□□ -1.97
HMGB1P4-201ENST00000455362 ROMO1P60602 79 aa2.74□□□□□ -1.97
HMGB1P4-201ENST00000455362 KRTAP13-3Q3SY46 172 aa2.74□□□□□ -1.97
HMGB1P4-201ENST00000455362 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
HMGB1P4-201ENST00000455362 KRTAP5-1Q6L8H4 278 aa2.74□□□□□ -1.97
HMGB1P4-201ENST00000455362 LPAP08519 4548 aa2.73□□□□□ -1.97
HMGB1P4-201ENST00000455362 LRP2P98164 4655 aa2.73□□□□□ -1.97
HMGB1P4-201ENST00000455362 KRTAP5-4Q6L8H1 288 aa2.73□□□□□ -1.97
HMGB1P4-201ENST00000455362 C20orf166-AS1Q96NR2 134 aa2.73□□□□□ -1.97
HMGB1P4-201ENST00000455362 TP53AIP1Q9HCN2 124 aa2.73□□□□□ -1.97
HMGB1P4-201ENST00000455362 HMCN2Q8NDA2 5059 aa2.72□□□□□ -1.97
HMGB1P4-201ENST00000455362 TPRXLQ17RH7 258 aa2.71□□□□□ -1.98
HMGB1P4-201ENST00000455362 SPTSSBQ8NFR3 76 aa2.7□□□□□ -1.98
HMGB1P4-201ENST00000455362 PRO2289Q9P1D8 64 aa2.7□□□□□ -1.98
HMGB1P4-201ENST00000455362 H0Y9P7 68 aa2.69□□□□□ -1.98
HMGB1P4-201ENST00000455362 ZCCHC13Q8WW36 166 aaKnown RBP2.69□□□□□ -1.98
HMGB1P4-201ENST00000455362 CYP4F30PQ9H0H9 118 aa2.69□□□□□ -1.98
HMGB1P4-201ENST00000455362 CDC42SE1Q9NRR8 79 aa2.69□□□□□ -1.98
HMGB1P4-201ENST00000455362 LOC101927531A0A1B0GV80 90 aa2.68□□□□□ -1.98
HMGB1P4-201ENST00000455362 RPL37P61927 97 aaKnown RBP2.68□□□□□ -1.98
HMGB1P4-201ENST00000455362 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
HMGB1P4-201ENST00000455362 CHKB-CPT1BH3BT56 60 aa2.67□□□□□ -1.98
HMGB1P4-201ENST00000455362 LINC00208Q96KT6 92 aa2.67□□□□□ -1.98
HMGB1P4-201ENST00000455362 MUC17Q685J3 4493 aa2.67□□□□□ -1.98
HMGB1P4-201ENST00000455362 P0C880 135 aa2.65□□□□□ -1.99
HMGB1P4-201ENST00000455362 PCOTHQ58A44 107 aa2.64□□□□□ -1.99
HMGB1P4-201ENST00000455362 SPINK7P58062 85 aa2.63□□□□□ -1.99
HMGB1P4-201ENST00000455362 KRTAP10-12P60413 245 aa2.63□□□□□ -1.99
HMGB1P4-201ENST00000455362 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
HMGB1P4-201ENST00000455362 PRR15LQ9BU68 103 aa2.63□□□□□ -1.99
HMGB1P4-201ENST00000455362 RNF213Q63HN8 5207 aa2.62□□□□□ -1.99
HMGB1P4-201ENST00000455362 UBR4Q5T4S7 5183 aa2.61□□□□□ -1.99
HMGB1P4-201ENST00000455362 MIR22HGQ0VDD5 57 aa2.6□□□□□ -1.99
HMGB1P4-201ENST00000455362 MUC2Q02817 5179 aa2.59□□□□□ -1.99
HMGB1P4-201ENST00000455362 KRTAP4-1Q9BYQ7 146 aa2.59□□□□□ -1.99
HMGB1P4-201ENST00000455362 CSAG1Q6PB30 78 aa2.58□□□□□ -2
HMGB1P4-201ENST00000455362 FLGP20930 4061 aaPredicted RBP2.58□□□□□ -2
HMGB1P4-201ENST00000455362 LINC01558Q9Y6Z2 57 aa2.57□□□□□ -2
HMGB1P4-201ENST00000455362 LCE3CQ5T5A8 94 aa2.55□□□□□ -2
HMGB1P4-201ENST00000455362 COX6B2Q6YFQ2 88 aa2.55□□□□□ -2
HMGB1P4-201ENST00000455362 DMAC1Q96GE9 116 aa2.54□□□□□ -2
HMGB1P4-201ENST00000455362 ACYP2P14621 99 aa2.53□□□□□ -2
HMGB1P4-201ENST00000455362 KRTAP19-2Q3LHN2 52 aa2.52□□□□□ -2.01
HMGB1P4-201ENST00000455362 KRTAP10-5P60370 271 aa2.51□□□□□ -2.01
HMGB1P4-201ENST00000455362 H1FX-AS1Q4G0G2 97 aa2.51□□□□□ -2.01
HMGB1P4-201ENST00000455362 COA5Q86WW8 74 aa2.5□□□□□ -2.01
HMGB1P4-201ENST00000455362 FAT4Q6V0I7 4981 aa2.5□□□□□ -2.01
HMGB1P4-201ENST00000455362 SPATA8Q6RVD6 105 aa2.48□□□□□ -2.01
HMGB1P4-201ENST00000455362 S4R3F8 94 aa2.46□□□□□ -2.02
HMGB1P4-201ENST00000455362 MT1HP80294 61 aa2.41□□□□□ -2.02
HMGB1P4-201ENST00000455362 KRTAP9-6A8MVA2 160 aa2.4□□□□□ -2.03
HMGB1P4-201ENST00000455362 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
HMGB1P4-201ENST00000455362 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
HMGB1P4-201ENST00000455362 M0R2T5 61 aa2.38□□□□□ -2.03
HMGB1P4-201ENST00000455362 H0YAA0 97 aa2.37□□□□□ -2.03
HMGB1P4-201ENST00000455362 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
HMGB1P4-201ENST00000455362 A0A1B0GU69 56 aa2.36□□□□□ -2.03
HMGB1P4-201ENST00000455362 KRTAP12-2P59991 146 aa2.35□□□□□ -2.03
HMGB1P4-201ENST00000455362 INE1O15225 51 aa2.34□□□□□ -2.03
HMGB1P4-201ENST00000455362 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms