RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 DMAC1Q96GE9 116 aa8.16□□□□□ -1.1
CCDC90B-202ENST00000455220 S4R3F8 94 aa8.07□□□□□ -1.12
CCDC90B-202ENST00000455220 M0R2T5 61 aa8.05□□□□□ -1.12
CCDC90B-202ENST00000455220 LCA10Q71F78 164 aa8.05□□□□□ -1.12
CCDC90B-202ENST00000455220 ACYP2P14621 99 aa8.04□□□□□ -1.12
CCDC90B-202ENST00000455220 PCP4P48539 62 aa8.01□□□□□ -1.13
CCDC90B-202ENST00000455220 KRTAP9-6A0A140TA67 174 aa7.97□□□□□ -1.13
CCDC90B-202ENST00000455220 KRTAP10-6P60371 365 aaPredicted RBP7.96□□□□□ -1.14
CCDC90B-202ENST00000455220 TMEM258P61165 79 aa7.95□□□□□ -1.14
CCDC90B-202ENST00000455220 ATP5EP56381 51 aaPredicted RBP7.94□□□□□ -1.14
CCDC90B-202ENST00000455220 CSAG1Q6PB30 78 aa7.94□□□□□ -1.14
CCDC90B-202ENST00000455220 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
CCDC90B-202ENST00000455220 COA5Q86WW8 74 aa7.88□□□□□ -1.15
CCDC90B-202ENST00000455220 CHKB-CPT1BH3BT56 60 aa7.88□□□□□ -1.15
CCDC90B-202ENST00000455220 KRTAP9-8Q9BYQ0 159 aa7.85□□□□□ -1.15
CCDC90B-202ENST00000455220 SPTSSBQ8NFR3 76 aa7.82□□□□□ -1.16
CCDC90B-202ENST00000455220 MT2AP02795 61 aa7.8□□□□□ -1.16
CCDC90B-202ENST00000455220 H0YAA0 97 aa7.76□□□□□ -1.17
CCDC90B-202ENST00000455220 MT1FP04733 61 aa7.74□□□□□ -1.17
CCDC90B-202ENST00000455220 FSIP2Q5CZC0 6907 aa7.7□□□□□ -1.18
CCDC90B-202ENST00000455220 SERP1Q9Y6X1 66 aa7.69□□□□□ -1.18
CCDC90B-202ENST00000455220 KRTAP10-10P60014 251 aa7.68□□□□□ -1.18
CCDC90B-202ENST00000455220 CRCT1Q9UGL9 99 aa7.67□□□□□ -1.18
CCDC90B-202ENST00000455220 ADM2Q7Z4H4 148 aa7.66□□□□□ -1.18
CCDC90B-202ENST00000455220 P0C880 135 aa7.59□□□□□ -1.2
CCDC90B-202ENST00000455220 KRTAP9-3Q9BYQ3 159 aa7.59□□□□□ -1.2
CCDC90B-202ENST00000455220 CRIPTQ9P021 101 aa7.54□□□□□ -1.2
CCDC90B-202ENST00000455220 RPS28P62857 69 aaKnown RBP7.53□□□□□ -1.2
CCDC90B-202ENST00000455220 SEC61GP60059 68 aa7.5□□□□□ -1.21
CCDC90B-202ENST00000455220 KRTAP19-1Q8IUB9 90 aa7.49□□□□□ -1.21
CCDC90B-202ENST00000455220 LINC01558Q9Y6Z2 57 aa7.49□□□□□ -1.21
CCDC90B-202ENST00000455220 SPRR2GQ9BYE4 73 aa7.48□□□□□ -1.21
CCDC90B-202ENST00000455220 A0A1B0GU69 56 aa7.46□□□□□ -1.22
CCDC90B-202ENST00000455220 USH2AO75445 5202 aa7.45□□□□□ -1.22
CCDC90B-202ENST00000455220 SMIM26A0A096LP01 95 aa7.43□□□□□ -1.22
CCDC90B-202ENST00000455220 R4GN34 69 aa7.42□□□□□ -1.22
CCDC90B-202ENST00000455220 Q1T7F1 81 aa7.39□□□□□ -1.23
CCDC90B-202ENST00000455220 PRR15LQ9BU68 103 aa7.39□□□□□ -1.23
CCDC90B-202ENST00000455220 M0QZ58 72 aa7.38□□□□□ -1.23
CCDC90B-202ENST00000455220 V9GYY9 64 aa7.38□□□□□ -1.23
CCDC90B-202ENST00000455220 A0A1B0GU33 70 aa7.35□□□□□ -1.23
CCDC90B-202ENST00000455220 KRTAP19-8Q3LI54 63 aa7.34□□□□□ -1.23
CCDC90B-202ENST00000455220 KRTAP13-4Q3LI77 160 aa7.33□□□□□ -1.24
CCDC90B-202ENST00000455220 Q5VV11 94 aa7.29□□□□□ -1.24
CCDC90B-202ENST00000455220 SSPOA2VEC9 5147 aa7.29□□□□□ -1.24
CCDC90B-202ENST00000455220 MT1BP07438 61 aa7.26□□□□□ -1.25
CCDC90B-202ENST00000455220 PSPHP1O15172 72 aa7.25□□□□□ -1.25
CCDC90B-202ENST00000455220 LINC01554Q52M75 96 aa7.23□□□□□ -1.25
CCDC90B-202ENST00000455220 SPATA8Q6RVD6 105 aa7.23□□□□□ -1.25
CCDC90B-202ENST00000455220 A6NN06 94 aa7.17□□□□□ -1.26
CCDC90B-202ENST00000455220 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.17□□□□□ -1.26
CCDC90B-202ENST00000455220 UQCR11O14957 56 aa7.17□□□□□ -1.26
CCDC90B-202ENST00000455220 KRTAP9-7A8MTY7 169 aa7.15□□□□□ -1.27
CCDC90B-202ENST00000455220 A0A0D9SG42 100 aa7.12□□□□□ -1.27
CCDC90B-202ENST00000455220 PLAC4Q8WY50 150 aa7.11□□□□□ -1.27
CCDC90B-202ENST00000455220 A8MU10 97 aa7.08□□□□□ -1.28
CCDC90B-202ENST00000455220 KRTAP19-6Q3LI70 58 aa7.08□□□□□ -1.28
CCDC90B-202ENST00000455220 MIR22HGQ0VDD5 57 aa7.06□□□□□ -1.28
CCDC90B-202ENST00000455220 FCGBPQ9Y6R7 5405 aaPredicted RBP7.05□□□□□ -1.28
CCDC90B-202ENST00000455220 A6NED7 52 aa7.03□□□□□ -1.28
CCDC90B-202ENST00000455220 KRTAP12-1P59990 96 aa7.03□□□□□ -1.28
CCDC90B-202ENST00000455220 KRTAP12-2P59991 146 aa6.98□□□□□ -1.29
CCDC90B-202ENST00000455220 SPINT4Q6UDR6 99 aa6.98□□□□□ -1.29
CCDC90B-202ENST00000455220 KRTAP10-5P60370 271 aa6.97□□□□□ -1.29
CCDC90B-202ENST00000455220 MT1XP80297 61 aa6.95□□□□□ -1.3
CCDC90B-202ENST00000455220 CAMK2N1Q7Z7J9 78 aa6.9□□□□□ -1.31
CCDC90B-202ENST00000455220 PRO2289Q9P1D8 64 aa6.9□□□□□ -1.31
CCDC90B-202ENST00000455220 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
CCDC90B-202ENST00000455220 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
CCDC90B-202ENST00000455220 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
CCDC90B-202ENST00000455220 MACF1Q9UPN3 7388 aaKnown RBP6.84□□□□□ -1.31
CCDC90B-202ENST00000455220 SYNE2Q8WXH0 6885 aaKnown RBP6.81□□□□□ -1.32
CCDC90B-202ENST00000455220 K7ERS5 55 aa6.79□□□□□ -1.32
CCDC90B-202ENST00000455220 BRK1Q8WUW1 75 aa6.68□□□□□ -1.34
CCDC90B-202ENST00000455220 C10orf95Q9H7T3 257 aa6.67□□□□□ -1.34
CCDC90B-202ENST00000455220 KRTAP10-7P60409 375 aaPredicted RBP6.63□□□□□ -1.35
CCDC90B-202ENST00000455220 KRTAP10-12P60413 245 aa6.61□□□□□ -1.35
CCDC90B-202ENST00000455220 KRTAP6-3Q3LI67 103 aa6.6□□□□□ -1.35
CCDC90B-202ENST00000455220 KMT2DO14686 5537 aa6.6□□□□□ -1.35
CCDC90B-202ENST00000455220 TNP1P09430 55 aa6.52□□□□□ -1.37
CCDC90B-202ENST00000455220 ROMO1P60602 79 aa6.47□□□□□ -1.37
CCDC90B-202ENST00000455220 KRTAP4-8A0A0G2JLE6 195 aa6.44□□□□□ -1.38
CCDC90B-202ENST00000455220 KRTAP25-1Q3LHN0 102 aa6.44□□□□□ -1.38
CCDC90B-202ENST00000455220 KRTAP4-8Q9BYQ9 185 aa6.44□□□□□ -1.38
CCDC90B-202ENST00000455220 MUC12Q9UKN1 5478 aa6.42□□□□□ -1.38
CCDC90B-202ENST00000455220 NEBP20929 6669 aa6.4□□□□□ -1.39
CCDC90B-202ENST00000455220 KRTAP8-1Q8IUC2 63 aa6.37□□□□□ -1.39
CCDC90B-202ENST00000455220 PRO0628Q9UI54 55 aa6.37□□□□□ -1.39
CCDC90B-202ENST00000455220 LCE3AQ5TA76 89 aa6.31□□□□□ -1.4
CCDC90B-202ENST00000455220 KRTAP5-9P26371 169 aa6.31□□□□□ -1.4
CCDC90B-202ENST00000455220 PMAIP1Q13794 54 aa6.31□□□□□ -1.4
CCDC90B-202ENST00000455220 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
CCDC90B-202ENST00000455220 KRTAP20-1Q3LI63 56 aa6.23□□□□□ -1.41
CCDC90B-202ENST00000455220 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
CCDC90B-202ENST00000455220 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.42
CCDC90B-202ENST00000455220 MDN1Q9NU22 5596 aa6.19□□□□□ -1.42
CCDC90B-202ENST00000455220 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
CCDC90B-202ENST00000455220 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
CCDC90B-202ENST00000455220 MT1EP04732 61 aa6.11□□□□□ -1.43
CCDC90B-202ENST00000455220 KRTAP4-12Q9BQ66 201 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms