RNA–Protein interactions for RNA: ENST00000454250.7

CHRNA7-203, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CHRNA7, Length 2,093 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-203ENST00000454250 ABCA13Q86UQ4 5058 aa10.96□□□□□ -0.66
CHRNA7-203ENST00000454250 SPATA8Q6RVD6 105 aa10.94□□□□□ -0.66
CHRNA7-203ENST00000454250 MIR22HGQ0VDD5 57 aa10.93□□□□□ -0.66
CHRNA7-203ENST00000454250 LRP2P98164 4655 aa10.9□□□□□ -0.66
CHRNA7-203ENST00000454250 LPAP08519 4548 aa10.88□□□□□ -0.67
CHRNA7-203ENST00000454250 A6NN06 94 aa10.87□□□□□ -0.67
CHRNA7-203ENST00000454250 HERC2O95714 4834 aa10.82□□□□□ -0.68
CHRNA7-203ENST00000454250 J3QL48 77 aa10.81□□□□□ -0.68
CHRNA7-203ENST00000454250 BIRC6Q9NR09 4857 aa10.77□□□□□ -0.69
CHRNA7-203ENST00000454250 KTN1-AS1Q86SY8 53 aa10.75□□□□□ -0.69
CHRNA7-203ENST00000454250 A0A1B0GU33 70 aa10.72□□□□□ -0.69
CHRNA7-203ENST00000454250 KRTAP3-3Q9BYR6 98 aa10.72□□□□□ -0.69
CHRNA7-203ENST00000454250 S4R3F8 94 aa10.69□□□□□ -0.7
CHRNA7-203ENST00000454250 H1FX-AS1Q4G0G2 97 aa10.68□□□□□ -0.7
CHRNA7-203ENST00000454250 H0YAA0 97 aa10.63□□□□□ -0.71
CHRNA7-203ENST00000454250 RBM12B-AS1Q9P1G2 102 aa10.6□□□□□ -0.71
CHRNA7-203ENST00000454250 SEC61BP60468 96 aaKnown RBP10.58□□□□□ -0.72
CHRNA7-203ENST00000454250 KRTAP10-6P60371 365 aaPredicted RBP10.47□□□□□ -0.73
CHRNA7-203ENST00000454250 MUC17Q685J3 4493 aa10.45□□□□□ -0.74
CHRNA7-203ENST00000454250 KRTAP3-2Q9BYR7 98 aa10.45□□□□□ -0.74
CHRNA7-203ENST00000454250 KRTAP4-1Q9BYQ7 146 aa10.43□□□□□ -0.74
CHRNA7-203ENST00000454250 CSAG1Q6PB30 78 aa10.38□□□□□ -0.75
CHRNA7-203ENST00000454250 PCLOQ9Y6V0 5065 aa10.35□□□□□ -0.75
CHRNA7-203ENST00000454250 K7ERS5 55 aa10.34□□□□□ -0.75
CHRNA7-203ENST00000454250 P0C880 135 aa10.34□□□□□ -0.75
CHRNA7-203ENST00000454250 ADM2Q7Z4H4 148 aa10.32□□□□□ -0.76
CHRNA7-203ENST00000454250 PRAC1Q96KF2 57 aa10.31□□□□□ -0.76
CHRNA7-203ENST00000454250 HERC1Q15751 4861 aa10.3□□□□□ -0.76
CHRNA7-203ENST00000454250 KRTAP13-4Q3LI77 160 aa10.29□□□□□ -0.76
CHRNA7-203ENST00000454250 A0A0D9SG42 100 aa10.22□□□□□ -0.77
CHRNA7-203ENST00000454250 KRTAP19-2Q3LHN2 52 aa10.18□□□□□ -0.78
CHRNA7-203ENST00000454250 HMCN2Q8NDA2 5059 aa10.18□□□□□ -0.78
CHRNA7-203ENST00000454250 MUC2Q02817 5179 aa10.16□□□□□ -0.78
CHRNA7-203ENST00000454250 M0QZ58 72 aa10.08□□□□□ -0.8
CHRNA7-203ENST00000454250 ROMO1P60602 79 aa9.99□□□□□ -0.81
CHRNA7-203ENST00000454250 KRTAP12-2P59991 146 aa9.95□□□□□ -0.82
CHRNA7-203ENST00000454250 FLGP20930 4061 aaPredicted RBP9.94□□□□□ -0.82
CHRNA7-203ENST00000454250 SPINT4Q6UDR6 99 aa9.93□□□□□ -0.82
CHRNA7-203ENST00000454250 KRTAP12-1P59990 96 aa9.92□□□□□ -0.82
CHRNA7-203ENST00000454250 R4GN34 69 aa9.91□□□□□ -0.82
CHRNA7-203ENST00000454250 KRTAP25-1Q3LHN0 102 aa9.9□□□□□ -0.82
CHRNA7-203ENST00000454250 LINC01554Q52M75 96 aa9.9□□□□□ -0.82
CHRNA7-203ENST00000454250 LORP23490 312 aaPredicted RBP9.87□□□□□ -0.83
CHRNA7-203ENST00000454250 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
CHRNA7-203ENST00000454250 LCE2CQ5TA81 110 aa9.78□□□□□ -0.84
CHRNA7-203ENST00000454250 UBR4Q5T4S7 5183 aa9.72□□□□□ -0.85
CHRNA7-203ENST00000454250 FAT4Q6V0I7 4981 aa9.7□□□□□ -0.86
CHRNA7-203ENST00000454250 RNF213Q63HN8 5207 aa9.7□□□□□ -0.86
CHRNA7-203ENST00000454250 MT1HP80294 61 aa9.54□□□□□ -0.88
CHRNA7-203ENST00000454250 M0R2T5 61 aa9.53□□□□□ -0.88
CHRNA7-203ENST00000454250 C10orf95Q9H7T3 257 aa9.52□□□□□ -0.88
CHRNA7-203ENST00000454250 CAMK2N1Q7Z7J9 78 aa9.37□□□□□ -0.91
CHRNA7-203ENST00000454250 H3BS24 57 aa9.33□□□□□ -0.92
CHRNA7-203ENST00000454250 SPRR2GQ9BYE4 73 aa9.27□□□□□ -0.93
CHRNA7-203ENST00000454250 MT2AP02795 61 aa9.27□□□□□ -0.93
CHRNA7-203ENST00000454250 KRTAP9-8Q9BYQ0 159 aa9.26□□□□□ -0.93
CHRNA7-203ENST00000454250 MT1FP04733 61 aa9.25□□□□□ -0.93
CHRNA7-203ENST00000454250 KRTAP19-1Q8IUB9 90 aa9.25□□□□□ -0.93
CHRNA7-203ENST00000454250 KRTAP10-10P60014 251 aa9.24□□□□□ -0.93
CHRNA7-203ENST00000454250 PLAC4Q8WY50 150 aa9.09□□□□□ -0.95
CHRNA7-203ENST00000454250 PP632Q6XCG6 107 aa9.01□□□□□ -0.97
CHRNA7-203ENST00000454250 TNP1P09430 55 aa8.98□□□□□ -0.97
CHRNA7-203ENST00000454250 KRTAP19-8Q3LI54 63 aa8.94□□□□□ -0.98
CHRNA7-203ENST00000454250 KRTAP15-1Q3LI76 137 aa8.9□□□□□ -0.98
CHRNA7-203ENST00000454250 KRTAP9-3Q9BYQ3 159 aa8.9□□□□□ -0.99
CHRNA7-203ENST00000454250 MT1BP07438 61 aa8.84□□□□□ -0.99
CHRNA7-203ENST00000454250 KRTAP23-1A1A580 65 aa8.81□□□□□ -1
CHRNA7-203ENST00000454250 LCE2AQ5TA79 106 aaPredicted RBP8.8□□□□□ -1
CHRNA7-203ENST00000454250 KRTAP10-5P60370 271 aa8.67□□□□□ -1.02
CHRNA7-203ENST00000454250 MT1XP80297 61 aa8.66□□□□□ -1.02
CHRNA7-203ENST00000454250 LCE2BO14633 110 aa8.61□□□□□ -1.03
CHRNA7-203ENST00000454250 NDUFAF8A1L188 74 aa8.54□□□□□ -1.04
CHRNA7-203ENST00000454250 LCE3AQ5TA76 89 aa8.5□□□□□ -1.05
CHRNA7-203ENST00000454250 PRO2289Q9P1D8 64 aa8.44□□□□□ -1.06
CHRNA7-203ENST00000454250 USH2AO75445 5202 aa8.39□□□□□ -1.07
CHRNA7-203ENST00000454250 KRTAP10-7P60409 375 aaPredicted RBP8.38□□□□□ -1.07
CHRNA7-203ENST00000454250 KRTAP10-12P60413 245 aa8.34□□□□□ -1.07
CHRNA7-203ENST00000454250 LUZP6Q538Z0 58 aa8.31□□□□□ -1.08
CHRNA7-203ENST00000454250 KRTAP8-1Q8IUC2 63 aa8.3□□□□□ -1.08
CHRNA7-203ENST00000454250 A0A0A0MQY5 61 aa8.22□□□□□ -1.09
CHRNA7-203ENST00000454250 SPRR5A0A1B0GTR4 108 aa8.19□□□□□ -1.1
CHRNA7-203ENST00000454250 KRTAP12-3P60328 96 aa8.13□□□□□ -1.11
CHRNA7-203ENST00000454250 KMT2DO14686 5537 aa8.02□□□□□ -1.13
CHRNA7-203ENST00000454250 SSPOA2VEC9 5147 aa8□□□□□ -1.13
CHRNA7-203ENST00000454250 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
CHRNA7-203ENST00000454250 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
CHRNA7-203ENST00000454250 KRTAP19-5Q3LI72 72 aa7.96□□□□□ -1.14
CHRNA7-203ENST00000454250 KRTAP19-6Q3LI70 58 aa7.88□□□□□ -1.15
CHRNA7-203ENST00000454250 FSIP2Q5CZC0 6907 aa7.86□□□□□ -1.15
CHRNA7-203ENST00000454250 LCE2DQ5TA82 110 aaPredicted RBP7.77□□□□□ -1.17
CHRNA7-203ENST00000454250 KRTAP19-7Q3SYF9 63 aa7.72□□□□□ -1.17
CHRNA7-203ENST00000454250 LCE3CQ5T5A8 94 aa7.63□□□□□ -1.19
CHRNA7-203ENST00000454250 FCGBPQ9Y6R7 5405 aaPredicted RBP7.55□□□□□ -1.2
CHRNA7-203ENST00000454250 MT1EP04732 61 aa7.54□□□□□ -1.2
CHRNA7-203ENST00000454250 MT1LQ93083 61 aa7.46□□□□□ -1.22
CHRNA7-203ENST00000454250 KRTAP19-4Q3LI73 84 aa7.44□□□□□ -1.22
CHRNA7-203ENST00000454250 KRTAP4-7Q9BYR0 210 aa7.41□□□□□ -1.22
CHRNA7-203ENST00000454250 KRTAP9-6A8MVA2 160 aa7.3□□□□□ -1.24
CHRNA7-203ENST00000454250 KRTAP9-2Q9BYQ4 174 aa7.29□□□□□ -1.24
CHRNA7-203ENST00000454250 MUC12Q9UKN1 5478 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms