RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 CSAG1Q6PB30 78 aa11.36□□□□□ -0.59
CPSF4-207ENST00000451876 KRTAP9-2Q9BYQ4 174 aa11.36□□□□□ -0.59
CPSF4-207ENST00000451876 ANAPC13Q9BS18 74 aa11.35□□□□□ -0.59
CPSF4-207ENST00000451876 LCE2DQ5TA82 110 aaPredicted RBP11.33□□□□□ -0.6
CPSF4-207ENST00000451876 KRTAP10-10P60014 251 aa11.31□□□□□ -0.6
CPSF4-207ENST00000451876 NDUFC1O43677 76 aa11.27□□□□□ -0.6
CPSF4-207ENST00000451876 CYSTM1Q9H1C7 97 aa11.26□□□□□ -0.61
CPSF4-207ENST00000451876 SPANXA2-OT1Q8N9U9 137 aa11.24□□□□□ -0.61
CPSF4-207ENST00000451876 ACYP2P14621 99 aa11.2□□□□□ -0.62
CPSF4-207ENST00000451876 KRTAP9-3Q9BYQ3 159 aa11.18□□□□□ -0.62
CPSF4-207ENST00000451876 H7BZZ5 65 aa11.16□□□□□ -0.62
CPSF4-207ENST00000451876 CCDC179H3BU77 68 aa11.14□□□□□ -0.63
CPSF4-207ENST00000451876 FSIP2Q5CZC0 6907 aa11.03□□□□□ -0.64
CPSF4-207ENST00000451876 H0YAA0 97 aa11.02□□□□□ -0.64
CPSF4-207ENST00000451876 LCE2BO14633 110 aa11.02□□□□□ -0.64
CPSF4-207ENST00000451876 CHKB-CPT1BH3BT56 60 aa11.01□□□□□ -0.65
CPSF4-207ENST00000451876 ADM2Q7Z4H4 148 aa10.96□□□□□ -0.65
CPSF4-207ENST00000451876 USH2AO75445 5202 aa10.96□□□□□ -0.66
CPSF4-207ENST00000451876 COA5Q86WW8 74 aa10.92□□□□□ -0.66
CPSF4-207ENST00000451876 KRTAP19-1Q8IUB9 90 aa10.91□□□□□ -0.66
CPSF4-207ENST00000451876 SPTSSBQ8NFR3 76 aa10.91□□□□□ -0.66
CPSF4-207ENST00000451876 SPRR2GQ9BYE4 73 aa10.83□□□□□ -0.68
CPSF4-207ENST00000451876 P0C880 135 aa10.82□□□□□ -0.68
CPSF4-207ENST00000451876 KRTAP3-2Q9BYR7 98 aa10.82□□□□□ -0.68
CPSF4-207ENST00000451876 CRCT1Q9UGL9 99 aa10.81□□□□□ -0.68
CPSF4-207ENST00000451876 CRIPTQ9P021 101 aa10.8□□□□□ -0.68
CPSF4-207ENST00000451876 KRTAP9-6A0A140TA67 174 aa10.76□□□□□ -0.69
CPSF4-207ENST00000451876 SSPOA2VEC9 5147 aa10.74□□□□□ -0.69
CPSF4-207ENST00000451876 ATP5EP56381 51 aaPredicted RBP10.73□□□□□ -0.69
CPSF4-207ENST00000451876 TMEM258P61165 79 aa10.7□□□□□ -0.7
CPSF4-207ENST00000451876 KRTAP19-8Q3LI54 63 aa10.66□□□□□ -0.7
CPSF4-207ENST00000451876 MT1BP07438 61 aa10.62□□□□□ -0.71
CPSF4-207ENST00000451876 R4GN34 69 aa10.62□□□□□ -0.71
CPSF4-207ENST00000451876 Q5VV11 94 aa10.58□□□□□ -0.72
CPSF4-207ENST00000451876 M0QZ58 72 aa10.57□□□□□ -0.72
CPSF4-207ENST00000451876 KRTAP19-6Q3LI70 58 aa10.5□□□□□ -0.73
CPSF4-207ENST00000451876 SEC61GP60059 68 aa10.44□□□□□ -0.74
CPSF4-207ENST00000451876 SERP1Q9Y6X1 66 aa10.42□□□□□ -0.74
CPSF4-207ENST00000451876 LINC01554Q52M75 96 aa10.4□□□□□ -0.74
CPSF4-207ENST00000451876 FCGBPQ9Y6R7 5405 aaPredicted RBP10.4□□□□□ -0.74
CPSF4-207ENST00000451876 KRTAP13-4Q3LI77 160 aa10.37□□□□□ -0.75
CPSF4-207ENST00000451876 A0A1B0GU69 56 aa10.33□□□□□ -0.76
CPSF4-207ENST00000451876 A0A1B0GU33 70 aa10.25□□□□□ -0.77
CPSF4-207ENST00000451876 PLAC4Q8WY50 150 aa10.25□□□□□ -0.77
CPSF4-207ENST00000451876 LINC01558Q9Y6Z2 57 aa10.23□□□□□ -0.77
CPSF4-207ENST00000451876 A6NN06 94 aa10.22□□□□□ -0.77
CPSF4-207ENST00000451876 KRTAP10-5P60370 271 aa10.22□□□□□ -0.77
CPSF4-207ENST00000451876 SPATA8Q6RVD6 105 aa10.2□□□□□ -0.78
CPSF4-207ENST00000451876 RPS28P62857 69 aaKnown RBP10.15□□□□□ -0.79
CPSF4-207ENST00000451876 PRR15LQ9BU68 103 aa10.14□□□□□ -0.79
CPSF4-207ENST00000451876 MT1XP80297 61 aa10.1□□□□□ -0.79
CPSF4-207ENST00000451876 A0A0D9SG42 100 aa10.07□□□□□ -0.8
CPSF4-207ENST00000451876 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-207ENST00000451876 SVIPQ8NHG7 77 aa10.04□□□□□ -0.8
CPSF4-207ENST00000451876 PRO2289Q9P1D8 64 aa10.01□□□□□ -0.81
CPSF4-207ENST00000451876 MACF1Q9UPN3 7388 aaKnown RBP10□□□□□ -0.81
CPSF4-207ENST00000451876 Q1T7F1 81 aa9.96□□□□□ -0.81
CPSF4-207ENST00000451876 SMIM26A0A096LP01 95 aa9.96□□□□□ -0.82
CPSF4-207ENST00000451876 A8MU10 97 aa9.95□□□□□ -0.82
CPSF4-207ENST00000451876 V9GYY9 64 aa9.95□□□□□ -0.82
CPSF4-207ENST00000451876 KRTAP12-1P59990 96 aa9.9□□□□□ -0.82
CPSF4-207ENST00000451876 PSPHP1O15172 72 aa9.89□□□□□ -0.83
CPSF4-207ENST00000451876 SPINT4Q6UDR6 99 aa9.88□□□□□ -0.83
CPSF4-207ENST00000451876 UQCR11O14957 56 aa9.86□□□□□ -0.83
CPSF4-207ENST00000451876 KRTAP12-2P59991 146 aa9.85□□□□□ -0.83
CPSF4-207ENST00000451876 CAMK2N1Q7Z7J9 78 aa9.84□□□□□ -0.83
CPSF4-207ENST00000451876 SYNE2Q8WXH0 6885 aaKnown RBP9.8□□□□□ -0.84
CPSF4-207ENST00000451876 KRTAP9-7A8MTY7 169 aa9.74□□□□□ -0.85
CPSF4-207ENST00000451876 MIR22HGQ0VDD5 57 aa9.71□□□□□ -0.86
CPSF4-207ENST00000451876 KRTAP10-7P60409 375 aaPredicted RBP9.67□□□□□ -0.86
CPSF4-207ENST00000451876 KMT2DO14686 5537 aa9.65□□□□□ -0.86
CPSF4-207ENST00000451876 KRTAP10-12P60413 245 aa9.57□□□□□ -0.88
CPSF4-207ENST00000451876 A6NED7 52 aa9.56□□□□□ -0.88
CPSF4-207ENST00000451876 KRTAP6-3Q3LI67 103 aa9.56□□□□□ -0.88
CPSF4-207ENST00000451876 KRTAP4-8A0A0G2JLE6 195 aa9.51□□□□□ -0.89
CPSF4-207ENST00000451876 KRTAP4-8Q9BYQ9 185 aa9.51□□□□□ -0.89
CPSF4-207ENST00000451876 C10orf95Q9H7T3 257 aa9.42□□□□□ -0.9
CPSF4-207ENST00000451876 KRTAP8-1Q8IUC2 63 aa9.41□□□□□ -0.9
CPSF4-207ENST00000451876 KRTAP5-9P26371 169 aa9.4□□□□□ -0.9
CPSF4-207ENST00000451876 K7ERS5 55 aa9.34□□□□□ -0.91
CPSF4-207ENST00000451876 PRO0628Q9UI54 55 aa9.33□□□□□ -0.92
CPSF4-207ENST00000451876 MUC12Q9UKN1 5478 aa9.29□□□□□ -0.92
CPSF4-207ENST00000451876 SPRR2FQ96RM1 72 aa9.27□□□□□ -0.92
CPSF4-207ENST00000451876 CDC42SE1Q9NRR8 79 aa9.27□□□□□ -0.93
CPSF4-207ENST00000451876 TNP1P09430 55 aa9.21□□□□□ -0.93
CPSF4-207ENST00000451876 BRK1Q8WUW1 75 aa9.19□□□□□ -0.94
CPSF4-207ENST00000451876 MDN1Q9NU22 5596 aa9.12□□□□□ -0.95
CPSF4-207ENST00000451876 NEBP20929 6669 aa9.07□□□□□ -0.96
CPSF4-207ENST00000451876 LCE3AQ5TA76 89 aa9.04□□□□□ -0.96
CPSF4-207ENST00000451876 KRTAP19-7Q3SYF9 63 aa9.02□□□□□ -0.96
CPSF4-207ENST00000451876 SPRR2EP22531 72 aa8.98□□□□□ -0.97
CPSF4-207ENST00000451876 SPRR2BP35325 72 aa8.98□□□□□ -0.97
CPSF4-207ENST00000451876 SPRR2AP35326 72 aa8.98□□□□□ -0.97
CPSF4-207ENST00000451876 KRTAP25-1Q3LHN0 102 aa8.98□□□□□ -0.97
CPSF4-207ENST00000451876 LCE1AQ5T7P2 110 aa8.96□□□□□ -0.98
CPSF4-207ENST00000451876 KRTAP19-5Q3LI72 72 aa8.94□□□□□ -0.98
CPSF4-207ENST00000451876 MT1EP04732 61 aa8.9□□□□□ -0.99
CPSF4-207ENST00000451876 ROMO1P60602 79 aa8.87□□□□□ -0.99
CPSF4-207ENST00000451876 PMAIP1Q13794 54 aa8.71□□□□□ -1.02
CPSF4-207ENST00000451876 KRTAP19-3Q7Z4W3 81 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms