RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 C1orf64Q8NEQ6 169 aa6.3□□□□□ -1.4
SNRNP27-203ENST00000450162 MT2AP02795 61 aa6.29□□□□□ -1.4
SNRNP27-203ENST00000450162 H0Y9P7 68 aa6.28□□□□□ -1.4
SNRNP27-203ENST00000450162 IMUPQ9GZP8 106 aa6.28□□□□□ -1.4
SNRNP27-203ENST00000450162 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
SNRNP27-203ENST00000450162 OCR1Q9BZK8 76 aa6.26□□□□□ -1.41
SNRNP27-203ENST00000450162 MP68P56378 58 aa6.25□□□□□ -1.41
SNRNP27-203ENST00000450162 KRTAP10-10P60014 251 aa6.25□□□□□ -1.41
SNRNP27-203ENST00000450162 C5orf47Q569G3 176 aa6.25□□□□□ -1.41
SNRNP27-203ENST00000450162 SCGB1A1P11684 91 aa6.24□□□□□ -1.41
SNRNP27-203ENST00000450162 MT1FP04733 61 aa6.23□□□□□ -1.41
SNRNP27-203ENST00000450162 H3BPC8 53 aa6.21□□□□□ -1.42
SNRNP27-203ENST00000450162 LINC00208Q96KT6 92 aa6.21□□□□□ -1.42
SNRNP27-203ENST00000450162 S4R3F8 94 aa6.21□□□□□ -1.42
SNRNP27-203ENST00000450162 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
SNRNP27-203ENST00000450162 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
SNRNP27-203ENST00000450162 MT-ATP8P03928 68 aa6.17□□□□□ -1.42
SNRNP27-203ENST00000450162 A8MUN3 132 aa6.16□□□□□ -1.42
SNRNP27-203ENST00000450162 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
SNRNP27-203ENST00000450162 LCA10Q71F78 164 aa6.15□□□□□ -1.42
SNRNP27-203ENST00000450162 FSIP2Q5CZC0 6907 aa6.14□□□□□ -1.43
SNRNP27-203ENST00000450162 KLKP1Q107X0 134 aa6.11□□□□□ -1.43
SNRNP27-203ENST00000450162 FAM236AA0A1B0GUQ0 79 aa6.09□□□□□ -1.43
SNRNP27-203ENST00000450162 FAM236BA0A1B0GV22 79 aa6.09□□□□□ -1.43
SNRNP27-203ENST00000450162 TRAV7A0A075B6U4 112 aa6.08□□□□□ -1.44
SNRNP27-203ENST00000450162 NDUFC1O43677 76 aa6.07□□□□□ -1.44
SNRNP27-203ENST00000450162 USH2AO75445 5202 aa6.02□□□□□ -1.45
SNRNP27-203ENST00000450162 DMAC1Q96GE9 116 aa6□□□□□ -1.45
SNRNP27-203ENST00000450162 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
SNRNP27-203ENST00000450162 H0YAA0 97 aa5.98□□□□□ -1.45
SNRNP27-203ENST00000450162 CRIPTQ9P021 101 aa5.96□□□□□ -1.46
SNRNP27-203ENST00000450162 SERP2Q8N6R1 65 aa5.95□□□□□ -1.46
SNRNP27-203ENST00000450162 SSPOA2VEC9 5147 aa5.93□□□□□ -1.46
SNRNP27-203ENST00000450162 ACYP2P14621 99 aa5.93□□□□□ -1.46
SNRNP27-203ENST00000450162 SPRR2GQ9BYE4 73 aa5.92□□□□□ -1.46
SNRNP27-203ENST00000450162 KRTAP19-6Q3LI70 58 aa5.88□□□□□ -1.47
SNRNP27-203ENST00000450162 C20orf197Q8N268 126 aa5.88□□□□□ -1.47
SNRNP27-203ENST00000450162 SNURFQ9Y675 71 aa5.88□□□□□ -1.47
SNRNP27-203ENST00000450162 SPANXA2-OT1Q8N9U9 137 aa5.87□□□□□ -1.47
SNRNP27-203ENST00000450162 ADM2Q7Z4H4 148 aa5.85□□□□□ -1.47
SNRNP27-203ENST00000450162 SPTSSBQ8NFR3 76 aa5.85□□□□□ -1.47
SNRNP27-203ENST00000450162 KRTAP19-8Q3LI54 63 aa5.84□□□□□ -1.47
SNRNP27-203ENST00000450162 Q5VV11 94 aa5.84□□□□□ -1.47
SNRNP27-203ENST00000450162 COX7CP15954 63 aa5.81□□□□□ -1.48
SNRNP27-203ENST00000450162 CHKB-CPT1BH3BT56 60 aa5.79□□□□□ -1.48
SNRNP27-203ENST00000450162 FCGBPQ9Y6R7 5405 aaPredicted RBP5.79□□□□□ -1.48
SNRNP27-203ENST00000450162 MT1BP07438 61 aa5.78□□□□□ -1.48
SNRNP27-203ENST00000450162 R4GN34 69 aa5.73□□□□□ -1.49
SNRNP27-203ENST00000450162 P0C880 135 aa5.72□□□□□ -1.49
SNRNP27-203ENST00000450162 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
SNRNP27-203ENST00000450162 ANAPC13Q9BS18 74 aa5.69□□□□□ -1.5
SNRNP27-203ENST00000450162 A6NN06 94 aa5.68□□□□□ -1.5
SNRNP27-203ENST00000450162 H7BZZ5 65 aa5.66□□□□□ -1.5
SNRNP27-203ENST00000450162 M0QZ58 72 aa5.66□□□□□ -1.5
SNRNP27-203ENST00000450162 KRTAP10-5P60370 271 aa5.64□□□□□ -1.51
SNRNP27-203ENST00000450162 COA5Q86WW8 74 aa5.64□□□□□ -1.51
SNRNP27-203ENST00000450162 PLAC4Q8WY50 150 aa5.62□□□□□ -1.51
SNRNP27-203ENST00000450162 CYSTM1Q9H1C7 97 aa5.6□□□□□ -1.51
SNRNP27-203ENST00000450162 KRTAP5-3Q6L8H2 238 aa5.59□□□□□ -1.51
SNRNP27-203ENST00000450162 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
SNRNP27-203ENST00000450162 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
SNRNP27-203ENST00000450162 LINC01554Q52M75 96 aa5.55□□□□□ -1.52
SNRNP27-203ENST00000450162 SEC61GP60059 68 aa5.54□□□□□ -1.52
SNRNP27-203ENST00000450162 CCDC179H3BU77 68 aa5.52□□□□□ -1.53
SNRNP27-203ENST00000450162 SERP1Q9Y6X1 66 aa5.52□□□□□ -1.53
SNRNP27-203ENST00000450162 ATP5EP56381 51 aaPredicted RBP5.5□□□□□ -1.53
SNRNP27-203ENST00000450162 KRTAP6-3Q3LI67 103 aa5.48□□□□□ -1.53
SNRNP27-203ENST00000450162 MT1XP80297 61 aa5.46□□□□□ -1.54
SNRNP27-203ENST00000450162 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
SNRNP27-203ENST00000450162 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.54
SNRNP27-203ENST00000450162 A0A1B0GU33 70 aa5.39□□□□□ -1.55
SNRNP27-203ENST00000450162 TMEM258P61165 79 aa5.39□□□□□ -1.55
SNRNP27-203ENST00000450162 A0A1B0GU69 56 aa5.38□□□□□ -1.55
SNRNP27-203ENST00000450162 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
SNRNP27-203ENST00000450162 PRR15LQ9BU68 103 aa5.31□□□□□ -1.56
SNRNP27-203ENST00000450162 KRTAP5-9P26371 169 aa5.3□□□□□ -1.56
SNRNP27-203ENST00000450162 SPATA8Q6RVD6 105 aa5.3□□□□□ -1.56
SNRNP27-203ENST00000450162 CAMK2N1Q7Z7J9 78 aa5.29□□□□□ -1.56
SNRNP27-203ENST00000450162 SMIM26A0A096LP01 95 aa5.27□□□□□ -1.57
SNRNP27-203ENST00000450162 A0A0D9SG42 100 aa5.27□□□□□ -1.57
SNRNP27-203ENST00000450162 LINC01558Q9Y6Z2 57 aa5.27□□□□□ -1.57
SNRNP27-203ENST00000450162 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
SNRNP27-203ENST00000450162 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
SNRNP27-203ENST00000450162 SPINT4Q6UDR6 99 aa5.21□□□□□ -1.58
SNRNP27-203ENST00000450162 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
SNRNP27-203ENST00000450162 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
SNRNP27-203ENST00000450162 KMT2DO14686 5537 aa5.17□□□□□ -1.58
SNRNP27-203ENST00000450162 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
SNRNP27-203ENST00000450162 SPRR2FQ96RM1 72 aa5.16□□□□□ -1.58
SNRNP27-203ENST00000450162 UQCR11O14957 56 aa5.13□□□□□ -1.59
SNRNP27-203ENST00000450162 NEBP20929 6669 aa5.12□□□□□ -1.59
SNRNP27-203ENST00000450162 A8MU10 97 aa5.12□□□□□ -1.59
SNRNP27-203ENST00000450162 V9GYY9 64 aa5.12□□□□□ -1.59
SNRNP27-203ENST00000450162 Q1T7F1 81 aa5.05□□□□□ -1.6
SNRNP27-203ENST00000450162 SPRR2EP22531 72 aa5.04□□□□□ -1.6
SNRNP27-203ENST00000450162 SPRR2BP35325 72 aa5.04□□□□□ -1.6
SNRNP27-203ENST00000450162 SPRR2AP35326 72 aa5.04□□□□□ -1.6
SNRNP27-203ENST00000450162 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
SNRNP27-203ENST00000450162 PCP4P48539 62 aa5.03□□□□□ -1.6
SNRNP27-203ENST00000450162 MIR22HGQ0VDD5 57 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms