RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 J3QL48 77 aa6.82□□□□□ -1.32
SHC1-210ENST00000448116 H1FX-AS1Q4G0G2 97 aa6.82□□□□□ -1.32
SHC1-210ENST00000448116 COX6B2Q6YFQ2 88 aa6.81□□□□□ -1.32
SHC1-210ENST00000448116 APOBP04114 4563 aaKnown RBP6.78□□□□□ -1.32
SHC1-210ENST00000448116 RYR2Q92736 4967 aa6.76□□□□□ -1.33
SHC1-210ENST00000448116 LRP1Q07954 4544 aaKnown RBP6.71□□□□□ -1.34
SHC1-210ENST00000448116 PKHD1L1Q86WI1 4243 aa6.71□□□□□ -1.34
SHC1-210ENST00000448116 K7ERS5 55 aa6.71□□□□□ -1.34
SHC1-210ENST00000448116 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
SHC1-210ENST00000448116 A0A0D9SG42 100 aa6.67□□□□□ -1.34
SHC1-210ENST00000448116 Q5VSD8 79 aa6.67□□□□□ -1.34
SHC1-210ENST00000448116 MYCBP2O75592 4640 aa6.65□□□□□ -1.34
SHC1-210ENST00000448116 KRTAP10-8P60410 259 aa6.64□□□□□ -1.35
SHC1-210ENST00000448116 RPL37P61927 97 aaKnown RBP6.63□□□□□ -1.35
SHC1-210ENST00000448116 XP32Q5T750 250 aa6.62□□□□□ -1.35
SHC1-210ENST00000448116 EPPK1P58107 5090 aaKnown RBP6.61□□□□□ -1.35
SHC1-210ENST00000448116 FAT3Q8TDW7 4589 aa6.61□□□□□ -1.35
SHC1-210ENST00000448116 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
SHC1-210ENST00000448116 KRTAP3-3Q9BYR6 98 aa6.6□□□□□ -1.35
SHC1-210ENST00000448116 S4R3F8 94 aa6.6□□□□□ -1.35
SHC1-210ENST00000448116 KRTAP10-6P60371 365 aaPredicted RBP6.59□□□□□ -1.36
SHC1-210ENST00000448116 HSPG2P98160 4391 aa6.58□□□□□ -1.36
SHC1-210ENST00000448116 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
SHC1-210ENST00000448116 C10orf95Q9H7T3 257 aa6.57□□□□□ -1.36
SHC1-210ENST00000448116 KIAA1109Q2LD37 5005 aa6.53□□□□□ -1.36
SHC1-210ENST00000448116 KRTAP3-2Q9BYR7 98 aa6.52□□□□□ -1.37
SHC1-210ENST00000448116 TNXBP22105 4242 aa6.52□□□□□ -1.37
SHC1-210ENST00000448116 TPRXLQ17RH7 258 aa6.5□□□□□ -1.37
SHC1-210ENST00000448116 KRTAP17-1Q9BYP8 105 aa6.49□□□□□ -1.37
SHC1-210ENST00000448116 MT1HL1P0DM35 61 aa6.42□□□□□ -1.38
SHC1-210ENST00000448116 RYR1P21817 5038 aa6.39□□□□□ -1.39
SHC1-210ENST00000448116 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
SHC1-210ENST00000448116 LRP2P98164 4655 aa6.36□□□□□ -1.39
SHC1-210ENST00000448116 LPAP08519 4548 aa6.35□□□□□ -1.39
SHC1-210ENST00000448116 KRTAP12-1P59990 96 aa6.29□□□□□ -1.4
SHC1-210ENST00000448116 KRTAP4-5Q9BYR2 181 aa6.24□□□□□ -1.41
SHC1-210ENST00000448116 M0QZ58 72 aa6.23□□□□□ -1.41
SHC1-210ENST00000448116 ABCA13Q86UQ4 5058 aa6.2□□□□□ -1.42
SHC1-210ENST00000448116 R4GN34 69 aa6.19□□□□□ -1.42
SHC1-210ENST00000448116 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
SHC1-210ENST00000448116 HERC2O95714 4834 aa6.14□□□□□ -1.43
SHC1-210ENST00000448116 PCLOQ9Y6V0 5065 aa6.08□□□□□ -1.44
SHC1-210ENST00000448116 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
SHC1-210ENST00000448116 KRTAP4-1Q9BYQ7 146 aa6.05□□□□□ -1.44
SHC1-210ENST00000448116 HERC1Q15751 4861 aa6.02□□□□□ -1.45
SHC1-210ENST00000448116 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
SHC1-210ENST00000448116 PLAC4Q8WY50 150 aa5.93□□□□□ -1.46
SHC1-210ENST00000448116 MUC17Q685J3 4493 aa5.92□□□□□ -1.46
SHC1-210ENST00000448116 MUC2Q02817 5179 aa5.84□□□□□ -1.47
SHC1-210ENST00000448116 KRTAP19-2Q3LHN2 52 aa5.82□□□□□ -1.48
SHC1-210ENST00000448116 RNF213Q63HN8 5207 aa5.71□□□□□ -1.5
SHC1-210ENST00000448116 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.5
SHC1-210ENST00000448116 UBR4Q5T4S7 5183 aa5.71□□□□□ -1.5
SHC1-210ENST00000448116 PP632Q6XCG6 107 aa5.67□□□□□ -1.5
SHC1-210ENST00000448116 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
SHC1-210ENST00000448116 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
SHC1-210ENST00000448116 TNP1P09430 55 aa5.63□□□□□ -1.51
SHC1-210ENST00000448116 M0R2T5 61 aa5.6□□□□□ -1.51
SHC1-210ENST00000448116 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
SHC1-210ENST00000448116 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
SHC1-210ENST00000448116 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
SHC1-210ENST00000448116 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
SHC1-210ENST00000448116 SPRR2GQ9BYE4 73 aa5.42□□□□□ -1.54
SHC1-210ENST00000448116 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
SHC1-210ENST00000448116 MT1HP80294 61 aa5.37□□□□□ -1.55
SHC1-210ENST00000448116 MT1FP04733 61 aa5.33□□□□□ -1.56
SHC1-210ENST00000448116 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
SHC1-210ENST00000448116 MT2AP02795 61 aa5.32□□□□□ -1.56
SHC1-210ENST00000448116 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
SHC1-210ENST00000448116 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
SHC1-210ENST00000448116 INE1O15225 51 aa5.24□□□□□ -1.57
SHC1-210ENST00000448116 KRTAP19-8Q3LI54 63 aa5.14□□□□□ -1.59
SHC1-210ENST00000448116 MT1BP07438 61 aa5.14□□□□□ -1.59
SHC1-210ENST00000448116 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
SHC1-210ENST00000448116 MT1XP80297 61 aa5.12□□□□□ -1.59
SHC1-210ENST00000448116 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
SHC1-210ENST00000448116 KRTAP10-12P60413 245 aa5.08□□□□□ -1.6
SHC1-210ENST00000448116 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
SHC1-210ENST00000448116 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
SHC1-210ENST00000448116 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
SHC1-210ENST00000448116 FSIP2Q5CZC0 6907 aa4.98□□□□□ -1.61
SHC1-210ENST00000448116 USH2AO75445 5202 aa4.92□□□□□ -1.62
SHC1-210ENST00000448116 LCE2BO14633 110 aa4.85□□□□□ -1.63
SHC1-210ENST00000448116 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
SHC1-210ENST00000448116 KMT2DO14686 5537 aa4.81□□□□□ -1.64
SHC1-210ENST00000448116 LCE2AQ5TA79 106 aaPredicted RBP4.78□□□□□ -1.64
SHC1-210ENST00000448116 KRTAP4-8A0A0G2JLE6 195 aa4.77□□□□□ -1.65
SHC1-210ENST00000448116 KRTAP4-8Q9BYQ9 185 aa4.77□□□□□ -1.65
SHC1-210ENST00000448116 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
SHC1-210ENST00000448116 LCE2DQ5TA82 110 aaPredicted RBP4.62□□□□□ -1.67
SHC1-210ENST00000448116 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
SHC1-210ENST00000448116 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
SHC1-210ENST00000448116 KRTAP19-7Q3SYF9 63 aa4.55□□□□□ -1.68
SHC1-210ENST00000448116 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
SHC1-210ENST00000448116 MT1LQ93083 61 aa4.43□□□□□ -1.7
SHC1-210ENST00000448116 MT1EP04732 61 aa4.42□□□□□ -1.7
SHC1-210ENST00000448116 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
SHC1-210ENST00000448116 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
SHC1-210ENST00000448116 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
SHC1-210ENST00000448116 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms