RNA–Protein interactions for RNA: ENST00000447712.6

FGFR1-214, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR1, Length 5,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-214ENST00000447712 BSNQ9UPA5 3926 aa8.46□□□□□ -1.06
FGFR1-214ENST00000447712 KRTAP23-1A1A580 65 aa8.29□□□□□ -1.08
FGFR1-214ENST00000447712 MT1HP80294 61 aa8.21□□□□□ -1.1
FGFR1-214ENST00000447712 VPS13CQ709C8 3753 aa8.17□□□□□ -1.1
FGFR1-214ENST00000447712 KRTAP4-1Q9BYQ7 146 aa8.15□□□□□ -1.1
FGFR1-214ENST00000447712 SPRR2FQ96RM1 72 aa8.1□□□□□ -1.11
FGFR1-214ENST00000447712 DNAH5Q8TE73 4624 aa8.09□□□□□ -1.11
FGFR1-214ENST00000447712 DNAH9Q9NYC9 4486 aa8.03□□□□□ -1.12
FGFR1-214ENST00000447712 MT2AP02795 61 aa8.03□□□□□ -1.12
FGFR1-214ENST00000447712 CSMD3Q7Z407 3707 aa8.01□□□□□ -1.13
FGFR1-214ENST00000447712 KRTAP10-7P60409 375 aaPredicted RBP7.98□□□□□ -1.13
FGFR1-214ENST00000447712 PLECQ15149 4684 aaKnown RBP7.91□□□□□ -1.14
FGFR1-214ENST00000447712 DNAH1Q9P2D7 4330 aa7.9□□□□□ -1.14
FGFR1-214ENST00000447712 DNAH10Q8IVF4 4471 aa7.87□□□□□ -1.15
FGFR1-214ENST00000447712 MT1FP04733 61 aa7.86□□□□□ -1.15
FGFR1-214ENST00000447712 KRTAP19-5Q3LI72 72 aa7.82□□□□□ -1.16
FGFR1-214ENST00000447712 DNAH2Q9P225 4427 aa7.8□□□□□ -1.16
FGFR1-214ENST00000447712 SPRR2GQ9BYE4 73 aa7.79□□□□□ -1.16
FGFR1-214ENST00000447712 ZNF469Q96JG9 3925 aaPredicted RBP7.79□□□□□ -1.16
FGFR1-214ENST00000447712 AKAP9Q99996 3911 aa7.79□□□□□ -1.16
FGFR1-214ENST00000447712 DNAH11Q96DT5 4516 aa7.78□□□□□ -1.16
FGFR1-214ENST00000447712 SPRR2EP22531 72 aa7.67□□□□□ -1.18
FGFR1-214ENST00000447712 SPRR2BP35325 72 aa7.67□□□□□ -1.18
FGFR1-214ENST00000447712 SPRR2AP35326 72 aa7.67□□□□□ -1.18
FGFR1-214ENST00000447712 FAT1Q14517 4588 aa7.65□□□□□ -1.18
FGFR1-214ENST00000447712 LCE3CQ5T5A8 94 aa7.59□□□□□ -1.19
FGFR1-214ENST00000447712 DNHD1Q96M86 4753 aa7.56□□□□□ -1.2
FGFR1-214ENST00000447712 DYNC1H1Q14204 4646 aaKnown RBP7.56□□□□□ -1.2
FGFR1-214ENST00000447712 LRP1BQ9NZR2 4599 aa7.53□□□□□ -1.2
FGFR1-214ENST00000447712 DNAH17Q9UFH2 4485 aa7.51□□□□□ -1.21
FGFR1-214ENST00000447712 FAT2Q9NYQ8 4349 aa7.5□□□□□ -1.21
FGFR1-214ENST00000447712 RYR1P21817 5038 aa7.49□□□□□ -1.21
FGFR1-214ENST00000447712 VPS13DQ5THJ4 4388 aa7.47□□□□□ -1.21
FGFR1-214ENST00000447712 SPRR2DP22532 72 aa7.42□□□□□ -1.22
FGFR1-214ENST00000447712 SACSQ9NZJ4 4579 aa7.41□□□□□ -1.22
FGFR1-214ENST00000447712 LCE3BQ5TA77 95 aa7.34□□□□□ -1.23
FGFR1-214ENST00000447712 DNAH8Q96JB1 4490 aa7.33□□□□□ -1.24
FGFR1-214ENST00000447712 DYNC2H1Q8NCM8 4307 aaKnown RBP7.3□□□□□ -1.24
FGFR1-214ENST00000447712 STARD9Q9P2P6 4700 aa7.29□□□□□ -1.24
FGFR1-214ENST00000447712 LCE2BO14633 110 aa7.28□□□□□ -1.24
FGFR1-214ENST00000447712 DNAH3Q8TD57 4116 aa7.28□□□□□ -1.24
FGFR1-214ENST00000447712 APOBP04114 4563 aaKnown RBP7.24□□□□□ -1.25
FGFR1-214ENST00000447712 VPS13BQ7Z7G8 4022 aa7.24□□□□□ -1.25
FGFR1-214ENST00000447712 MT1GP13640 62 aa7.23□□□□□ -1.25
FGFR1-214ENST00000447712 ANK2Q01484 3957 aa7.17□□□□□ -1.26
FGFR1-214ENST00000447712 KRTAP19-4Q3LI73 84 aa7.16□□□□□ -1.26
FGFR1-214ENST00000447712 KRTAP19-8Q3LI54 63 aa7.16□□□□□ -1.26
FGFR1-214ENST00000447712 RYR3Q15413 4870 aa7.15□□□□□ -1.26
FGFR1-214ENST00000447712 KRTAP12-4P60329 112 aa7.15□□□□□ -1.27
FGFR1-214ENST00000447712 KRTAP19-1Q8IUB9 90 aa7.14□□□□□ -1.27
FGFR1-214ENST00000447712 KRTAP17-1Q9BYP8 105 aa7.11□□□□□ -1.27
FGFR1-214ENST00000447712 MT1XP80297 61 aa7.09□□□□□ -1.28
FGFR1-214ENST00000447712 FAT3Q8TDW7 4589 aa7.06□□□□□ -1.28
FGFR1-214ENST00000447712 KRTAP4-8A0A0G2JLE6 195 aa7.04□□□□□ -1.28
FGFR1-214ENST00000447712 KRTAP4-8Q9BYQ9 185 aa7.04□□□□□ -1.28
FGFR1-214ENST00000447712 KMT2AQ03164 3969 aa7.03□□□□□ -1.28
FGFR1-214ENST00000447712 PRKDCP78527 4128 aaKnown RBP7.02□□□□□ -1.28
FGFR1-214ENST00000447712 MT1BP07438 61 aa6.98□□□□□ -1.29
FGFR1-214ENST00000447712 LRP1Q07954 4544 aaKnown RBP6.98□□□□□ -1.29
FGFR1-214ENST00000447712 LYSTQ99698 3801 aa6.95□□□□□ -1.3
FGFR1-214ENST00000447712 KRTAP9-8Q9BYQ0 159 aa6.94□□□□□ -1.3
FGFR1-214ENST00000447712 DNAH7Q8WXX0 4024 aa6.94□□□□□ -1.3
FGFR1-214ENST00000447712 CMYA5Q8N3K9 4069 aa6.91□□□□□ -1.3
FGFR1-214ENST00000447712 FRAS1Q86XX4 4008 aa6.89□□□□□ -1.31
FGFR1-214ENST00000447712 LCE2CQ5TA81 110 aa6.85□□□□□ -1.31
FGFR1-214ENST00000447712 KRTAP9-3Q9BYQ3 159 aa6.83□□□□□ -1.32
FGFR1-214ENST00000447712 MYCBP2O75592 4640 aa6.81□□□□□ -1.32
FGFR1-214ENST00000447712 LCE2DQ5TA82 110 aaPredicted RBP6.8□□□□□ -1.32
FGFR1-214ENST00000447712 HERC1Q15751 4861 aa6.78□□□□□ -1.32
FGFR1-214ENST00000447712 LCE3DQ9BYE3 92 aa6.77□□□□□ -1.33
FGFR1-214ENST00000447712 DNAH6Q9C0G6 4158 aa6.77□□□□□ -1.33
FGFR1-214ENST00000447712 KIAA1109Q2LD37 5005 aa6.67□□□□□ -1.34
FGFR1-214ENST00000447712 RYR2Q92736 4967 aa6.67□□□□□ -1.34
FGFR1-214ENST00000447712 KRTAP19-3Q7Z4W3 81 aa6.66□□□□□ -1.34
FGFR1-214ENST00000447712 MT4P47944 62 aa6.66□□□□□ -1.34
FGFR1-214ENST00000447712 LCE3EQ5T5B0 92 aa6.61□□□□□ -1.35
FGFR1-214ENST00000447712 PKD1P98161 4303 aa6.61□□□□□ -1.35
FGFR1-214ENST00000447712 PKHD1L1Q86WI1 4243 aa6.61□□□□□ -1.35
FGFR1-214ENST00000447712 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
FGFR1-214ENST00000447712 HECTD4Q9Y4D8 3996 aa6.54□□□□□ -1.36
FGFR1-214ENST00000447712 HSPG2P98160 4391 aa6.53□□□□□ -1.36
FGFR1-214ENST00000447712 KRTAP9-2Q9BYQ4 174 aa6.51□□□□□ -1.37
FGFR1-214ENST00000447712 HERC2O95714 4834 aa6.51□□□□□ -1.37
FGFR1-214ENST00000447712 BIRC6Q9NR09 4857 aa6.5□□□□□ -1.37
FGFR1-214ENST00000447712 PCLOQ9Y6V0 5065 aa6.49□□□□□ -1.37
FGFR1-214ENST00000447712 MT1LQ93083 61 aa6.48□□□□□ -1.37
FGFR1-214ENST00000447712 LPAP08519 4548 aa6.44□□□□□ -1.38
FGFR1-214ENST00000447712 MT1EP04732 61 aa6.43□□□□□ -1.38
FGFR1-214ENST00000447712 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
FGFR1-214ENST00000447712 LCE1BQ5T7P3 118 aa6.35□□□□□ -1.39
FGFR1-214ENST00000447712 LRP2P98164 4655 aa6.34□□□□□ -1.4
FGFR1-214ENST00000447712 MT3P25713 68 aa6.33□□□□□ -1.4
FGFR1-214ENST00000447712 PKHD1P08F94 4074 aa6.3□□□□□ -1.4
FGFR1-214ENST00000447712 MT1MQ8N339 61 aa6.3□□□□□ -1.4
FGFR1-214ENST00000447712 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
FGFR1-214ENST00000447712 HYDINQ4G0P3 5121 aa6.28□□□□□ -1.4
FGFR1-214ENST00000447712 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.4
FGFR1-214ENST00000447712 EPPK1P58107 5090 aaKnown RBP6.23□□□□□ -1.41
FGFR1-214ENST00000447712 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
FGFR1-214ENST00000447712 KRTAP9-6A0A140TA67 174 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms