RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CYSTM1Q9H1C7 97 aa8.73□□□□□ -1.01
TRAPPC4-203ENST00000447216 A8MUN3 132 aa8.72□□□□□ -1.01
TRAPPC4-203ENST00000447216 KRTAP10-6P60371 365 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC4-203ENST00000447216 DMAC1Q96GE9 116 aa8.7□□□□□ -1.02
TRAPPC4-203ENST00000447216 LCA10Q71F78 164 aa8.69□□□□□ -1.02
TRAPPC4-203ENST00000447216 SPANXA2-OT1Q8N9U9 137 aa8.65□□□□□ -1.02
TRAPPC4-203ENST00000447216 H7BZZ5 65 aa8.64□□□□□ -1.03
TRAPPC4-203ENST00000447216 NDUFC1O43677 76 aa8.63□□□□□ -1.03
TRAPPC4-203ENST00000447216 ACYP2P14621 99 aa8.59□□□□□ -1.03
TRAPPC4-203ENST00000447216 CSAG1Q6PB30 78 aa8.57□□□□□ -1.04
TRAPPC4-203ENST00000447216 KRTAP9-8Q9BYQ0 159 aa8.55□□□□□ -1.04
TRAPPC4-203ENST00000447216 MT2AP02795 61 aa8.5□□□□□ -1.05
TRAPPC4-203ENST00000447216 CHKB-CPT1BH3BT56 60 aa8.46□□□□□ -1.06
TRAPPC4-203ENST00000447216 MT1FP04733 61 aa8.45□□□□□ -1.06
TRAPPC4-203ENST00000447216 COA5Q86WW8 74 aa8.43□□□□□ -1.06
TRAPPC4-203ENST00000447216 KRTAP10-10P60014 251 aa8.42□□□□□ -1.06
TRAPPC4-203ENST00000447216 PCP4P48539 62 aa8.39□□□□□ -1.07
TRAPPC4-203ENST00000447216 ATP5EP56381 51 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC4-203ENST00000447216 TMEM258P61165 79 aa8.36□□□□□ -1.07
TRAPPC4-203ENST00000447216 SPTSSBQ8NFR3 76 aa8.35□□□□□ -1.07
TRAPPC4-203ENST00000447216 H0YAA0 97 aa8.29□□□□□ -1.08
TRAPPC4-203ENST00000447216 ADM2Q7Z4H4 148 aa8.29□□□□□ -1.08
TRAPPC4-203ENST00000447216 KRTAP9-3Q9BYQ3 159 aa8.27□□□□□ -1.09
TRAPPC4-203ENST00000447216 KRTAP9-2Q9BYQ4 174 aa8.21□□□□□ -1.1
TRAPPC4-203ENST00000447216 P0C880 135 aa8.2□□□□□ -1.1
TRAPPC4-203ENST00000447216 KRTAP19-1Q8IUB9 90 aa8.12□□□□□ -1.11
TRAPPC4-203ENST00000447216 SERP1Q9Y6X1 66 aa8.12□□□□□ -1.11
TRAPPC4-203ENST00000447216 CRIPTQ9P021 101 aa8.09□□□□□ -1.11
TRAPPC4-203ENST00000447216 SPRR2GQ9BYE4 73 aa8.07□□□□□ -1.12
TRAPPC4-203ENST00000447216 USH2AO75445 5202 aa8.07□□□□□ -1.12
TRAPPC4-203ENST00000447216 KRTAP23-1A1A580 65 aa8.02□□□□□ -1.13
TRAPPC4-203ENST00000447216 SEC61GP60059 68 aa8.02□□□□□ -1.13
TRAPPC4-203ENST00000447216 R4GN34 69 aa8.01□□□□□ -1.13
TRAPPC4-203ENST00000447216 M0QZ58 72 aa8□□□□□ -1.13
TRAPPC4-203ENST00000447216 A0A1B0GU69 56 aa7.96□□□□□ -1.14
TRAPPC4-203ENST00000447216 KRTAP19-8Q3LI54 63 aa7.94□□□□□ -1.14
TRAPPC4-203ENST00000447216 LINC01558Q9Y6Z2 57 aa7.94□□□□□ -1.14
TRAPPC4-203ENST00000447216 MT1BP07438 61 aa7.9□□□□□ -1.14
TRAPPC4-203ENST00000447216 KRTAP13-4Q3LI77 160 aa7.9□□□□□ -1.14
TRAPPC4-203ENST00000447216 Q5VV11 94 aa7.9□□□□□ -1.14
TRAPPC4-203ENST00000447216 LINC01554Q52M75 96 aa7.88□□□□□ -1.15
TRAPPC4-203ENST00000447216 SSPOA2VEC9 5147 aa7.88□□□□□ -1.15
TRAPPC4-203ENST00000447216 A0A1B0GU33 70 aa7.86□□□□□ -1.15
TRAPPC4-203ENST00000447216 FSIP2Q5CZC0 6907 aa7.85□□□□□ -1.15
TRAPPC4-203ENST00000447216 RPS28P62857 69 aaKnown RBP7.85□□□□□ -1.15
TRAPPC4-203ENST00000447216 PRR15LQ9BU68 103 aa7.85□□□□□ -1.15
TRAPPC4-203ENST00000447216 CRCT1Q9UGL9 99 aa7.84□□□□□ -1.15
TRAPPC4-203ENST00000447216 SMIM26A0A096LP01 95 aa7.83□□□□□ -1.16
TRAPPC4-203ENST00000447216 SPATA8Q6RVD6 105 aa7.8□□□□□ -1.16
TRAPPC4-203ENST00000447216 Q1T7F1 81 aa7.78□□□□□ -1.16
TRAPPC4-203ENST00000447216 V9GYY9 64 aa7.77□□□□□ -1.17
TRAPPC4-203ENST00000447216 KRTAP9-6A0A140TA67 174 aa7.75□□□□□ -1.17
TRAPPC4-203ENST00000447216 A0A0D9SG42 100 aa7.72□□□□□ -1.17
TRAPPC4-203ENST00000447216 PSPHP1O15172 72 aa7.72□□□□□ -1.17
TRAPPC4-203ENST00000447216 KRTAP19-6Q3LI70 58 aa7.71□□□□□ -1.18
TRAPPC4-203ENST00000447216 PLAC4Q8WY50 150 aa7.71□□□□□ -1.18
TRAPPC4-203ENST00000447216 KRTAP19-4Q3LI73 84 aa7.67□□□□□ -1.18
TRAPPC4-203ENST00000447216 A6NN06 94 aa7.64□□□□□ -1.19
TRAPPC4-203ENST00000447216 A8MU10 97 aa7.64□□□□□ -1.19
TRAPPC4-203ENST00000447216 FCGBPQ9Y6R7 5405 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC4-203ENST00000447216 UQCR11O14957 56 aa7.61□□□□□ -1.19
TRAPPC4-203ENST00000447216 KRTAP10-5P60370 271 aa7.58□□□□□ -1.2
TRAPPC4-203ENST00000447216 A0A0A0MQY5 61 aa7.55□□□□□ -1.2
TRAPPC4-203ENST00000447216 KRTAP12-1P59990 96 aa7.55□□□□□ -1.2
TRAPPC4-203ENST00000447216 SPINT4Q6UDR6 99 aa7.55□□□□□ -1.2
TRAPPC4-203ENST00000447216 MT1XP80297 61 aa7.53□□□□□ -1.2
TRAPPC4-203ENST00000447216 MIR22HGQ0VDD5 57 aa7.52□□□□□ -1.21
TRAPPC4-203ENST00000447216 KRTAP12-2P59991 146 aa7.51□□□□□ -1.21
TRAPPC4-203ENST00000447216 A6NED7 52 aa7.47□□□□□ -1.21
TRAPPC4-203ENST00000447216 CAMK2N1Q7Z7J9 78 aa7.46□□□□□ -1.22
TRAPPC4-203ENST00000447216 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
TRAPPC4-203ENST00000447216 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC4-203ENST00000447216 CDC42SE1Q9NRR8 79 aa7.25□□□□□ -1.25
TRAPPC4-203ENST00000447216 K7ERS5 55 aa7.23□□□□□ -1.25
TRAPPC4-203ENST00000447216 KRTAP10-7P60409 375 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC4-203ENST00000447216 MACF1Q9UPN3 7388 aaKnown RBP7.19□□□□□ -1.26
TRAPPC4-203ENST00000447216 C10orf95Q9H7T3 257 aa7.18□□□□□ -1.26
TRAPPC4-203ENST00000447216 LOC100996750A0A140TA64 210 aa7.13□□□□□ -1.27
TRAPPC4-203ENST00000447216 KRTAP10-12P60413 245 aa7.13□□□□□ -1.27
TRAPPC4-203ENST00000447216 KRTAP4-6Q9BYQ5 205 aa7.13□□□□□ -1.27
TRAPPC4-203ENST00000447216 KMT2DO14686 5537 aa7.12□□□□□ -1.27
TRAPPC4-203ENST00000447216 KRTAP4-8A0A0G2JLE6 195 aa7.06□□□□□ -1.28
TRAPPC4-203ENST00000447216 KRTAP4-8Q9BYQ9 185 aa7.06□□□□□ -1.28
TRAPPC4-203ENST00000447216 BRK1Q8WUW1 75 aa7.05□□□□□ -1.28
TRAPPC4-203ENST00000447216 KRTAP9-7A8MTY7 169 aa7.03□□□□□ -1.28
TRAPPC4-203ENST00000447216 TNP1P09430 55 aa7□□□□□ -1.29
TRAPPC4-203ENST00000447216 SYNE2Q8WXH0 6885 aaKnown RBP6.99□□□□□ -1.29
TRAPPC4-203ENST00000447216 KRTAP8-1Q8IUC2 63 aa6.97□□□□□ -1.29
TRAPPC4-203ENST00000447216 KRTAP6-3Q3LI67 103 aa6.96□□□□□ -1.3
TRAPPC4-203ENST00000447216 KRTAP4-12Q9BQ66 201 aa6.93□□□□□ -1.3
TRAPPC4-203ENST00000447216 ROMO1P60602 79 aa6.88□□□□□ -1.31
TRAPPC4-203ENST00000447216 KRTAP25-1Q3LHN0 102 aa6.87□□□□□ -1.31
TRAPPC4-203ENST00000447216 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
TRAPPC4-203ENST00000447216 KRTAP5-9P26371 169 aa6.85□□□□□ -1.31
TRAPPC4-203ENST00000447216 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
TRAPPC4-203ENST00000447216 LCE4AQ5TA78 99 aa6.84□□□□□ -1.31
TRAPPC4-203ENST00000447216 SPRR2FQ96RM1 72 aa6.83□□□□□ -1.32
TRAPPC4-203ENST00000447216 MUC12Q9UKN1 5478 aa6.77□□□□□ -1.33
TRAPPC4-203ENST00000447216 KRTAP19-5Q3LI72 72 aa6.72□□□□□ -1.33
TRAPPC4-203ENST00000447216 KRTAP19-7Q3SYF9 63 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms