RNA–Protein interactions for RNA: ENST00000446425.2

UBXN2A-203, Transcript of UBX domain protein 2A, humanhuman

TSL 1 (best)

Gene UBXN2A, Length 2,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-203ENST00000446425 S4R3F8 94 aa8.63□□□□□ -1.03
UBXN2A-203ENST00000446425 HYDINQ4G0P3 5121 aa8.59□□□□□ -1.03
UBXN2A-203ENST00000446425 PKHD1P08F94 4074 aa8.56□□□□□ -1.04
UBXN2A-203ENST00000446425 KRTAP12-2P59991 146 aa8.56□□□□□ -1.04
UBXN2A-203ENST00000446425 SMR3BP02814 79 aaPredicted RBP8.54□□□□□ -1.04
UBXN2A-203ENST00000446425 APOBP04114 4563 aaKnown RBP8.51□□□□□ -1.05
UBXN2A-203ENST00000446425 KRTAP12-1P59990 96 aa8.48□□□□□ -1.05
UBXN2A-203ENST00000446425 KRTAP10-4P60372 401 aaPredicted RBP8.48□□□□□ -1.05
UBXN2A-203ENST00000446425 XP32Q5T750 250 aa8.48□□□□□ -1.05
UBXN2A-203ENST00000446425 DMBT1Q9UGM3 2413 aaPredicted RBP8.48□□□□□ -1.05
UBXN2A-203ENST00000446425 KRTAP10-8P60410 259 aa8.44□□□□□ -1.06
UBXN2A-203ENST00000446425 DYNC1H1Q14204 4646 aaKnown RBP8.36□□□□□ -1.07
UBXN2A-203ENST00000446425 M0QZ58 72 aa8.34□□□□□ -1.07
UBXN2A-203ENST00000446425 FAT1Q14517 4588 aa8.34□□□□□ -1.07
UBXN2A-203ENST00000446425 FAT3Q8TDW7 4589 aa8.34□□□□□ -1.07
UBXN2A-203ENST00000446425 LRP1Q07954 4544 aaKnown RBP8.34□□□□□ -1.07
UBXN2A-203ENST00000446425 TNXBP22105 4242 aa8.28□□□□□ -1.08
UBXN2A-203ENST00000446425 HSPG2P98160 4391 aa8.28□□□□□ -1.08
UBXN2A-203ENST00000446425 A0A1B0GVY2 172 aa8.21□□□□□ -1.09
UBXN2A-203ENST00000446425 DNHD1Q96M86 4753 aa8.16□□□□□ -1.1
UBXN2A-203ENST00000446425 PLAC4Q8WY50 150 aa8.13□□□□□ -1.11
UBXN2A-203ENST00000446425 A0A0A0MQY5 61 aa8.08□□□□□ -1.12
UBXN2A-203ENST00000446425 LUZP6Q538Z0 58 aa8.02□□□□□ -1.13
UBXN2A-203ENST00000446425 MYCBP2O75592 4640 aa7.98□□□□□ -1.13
UBXN2A-203ENST00000446425 R4GN34 69 aa7.98□□□□□ -1.13
UBXN2A-203ENST00000446425 Q5VSD8 79 aa7.87□□□□□ -1.15
UBXN2A-203ENST00000446425 PP632Q6XCG6 107 aa7.87□□□□□ -1.15
UBXN2A-203ENST00000446425 LPAP08519 4548 aa7.86□□□□□ -1.15
UBXN2A-203ENST00000446425 KMT2CQ8NEZ4 4911 aaKnown RBP7.77□□□□□ -1.17
UBXN2A-203ENST00000446425 MT1HL1P0DM35 61 aa7.77□□□□□ -1.17
UBXN2A-203ENST00000446425 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
UBXN2A-203ENST00000446425 LRP2P98164 4655 aa7.73□□□□□ -1.17
UBXN2A-203ENST00000446425 RYR2Q92736 4967 aa7.73□□□□□ -1.17
UBXN2A-203ENST00000446425 LCE2DQ5TA82 110 aaPredicted RBP7.63□□□□□ -1.19
UBXN2A-203ENST00000446425 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
UBXN2A-203ENST00000446425 KRTAP17-1Q9BYP8 105 aa7.6□□□□□ -1.19
UBXN2A-203ENST00000446425 RYR1P21817 5038 aa7.56□□□□□ -1.2
UBXN2A-203ENST00000446425 SPRR5A0A1B0GTR4 108 aa7.52□□□□□ -1.21
UBXN2A-203ENST00000446425 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.21
UBXN2A-203ENST00000446425 MUC17Q685J3 4493 aa7.49□□□□□ -1.21
UBXN2A-203ENST00000446425 SEC61BP60468 96 aaKnown RBP7.49□□□□□ -1.21
UBXN2A-203ENST00000446425 TNP1P09430 55 aa7.44□□□□□ -1.22
UBXN2A-203ENST00000446425 KRTAP21-3Q3LHN1 58 aa7.44□□□□□ -1.22
UBXN2A-203ENST00000446425 KRTAP4-1Q9BYQ7 146 aa7.36□□□□□ -1.23
UBXN2A-203ENST00000446425 KRTAP19-2Q3LHN2 52 aa7.34□□□□□ -1.23
UBXN2A-203ENST00000446425 KIAA1109Q2LD37 5005 aa7.29□□□□□ -1.24
UBXN2A-203ENST00000446425 RYR3Q15413 4870 aa7.28□□□□□ -1.24
UBXN2A-203ENST00000446425 ABCA13Q86UQ4 5058 aa7.27□□□□□ -1.25
UBXN2A-203ENST00000446425 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
UBXN2A-203ENST00000446425 J3QL48 77 aa7.16□□□□□ -1.26
UBXN2A-203ENST00000446425 FLGP20930 4061 aaPredicted RBP7.1□□□□□ -1.27
UBXN2A-203ENST00000446425 HERC1Q15751 4861 aa7.09□□□□□ -1.28
UBXN2A-203ENST00000446425 INE1O15225 51 aa7.04□□□□□ -1.28
UBXN2A-203ENST00000446425 KRTAP4-5Q9BYR2 181 aa7.02□□□□□ -1.29
UBXN2A-203ENST00000446425 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
UBXN2A-203ENST00000446425 SPRR2GQ9BYE4 73 aa6.93□□□□□ -1.3
UBXN2A-203ENST00000446425 EPPK1P58107 5090 aaKnown RBP6.87□□□□□ -1.31
UBXN2A-203ENST00000446425 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
UBXN2A-203ENST00000446425 KRTAP8-1Q8IUC2 63 aa6.82□□□□□ -1.32
UBXN2A-203ENST00000446425 MUC2Q02817 5179 aa6.79□□□□□ -1.32
UBXN2A-203ENST00000446425 PCLOQ9Y6V0 5065 aa6.76□□□□□ -1.33
UBXN2A-203ENST00000446425 BIRC6Q9NR09 4857 aa6.75□□□□□ -1.33
UBXN2A-203ENST00000446425 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
UBXN2A-203ENST00000446425 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
UBXN2A-203ENST00000446425 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
UBXN2A-203ENST00000446425 HERC2O95714 4834 aa6.58□□□□□ -1.36
UBXN2A-203ENST00000446425 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
UBXN2A-203ENST00000446425 M0R2T5 61 aa6.52□□□□□ -1.36
UBXN2A-203ENST00000446425 KRTAP10-5P60370 271 aa6.52□□□□□ -1.37
UBXN2A-203ENST00000446425 KRTAP10-10P60014 251 aa6.51□□□□□ -1.37
UBXN2A-203ENST00000446425 MT1FP04733 61 aa6.5□□□□□ -1.37
UBXN2A-203ENST00000446425 MT2AP02795 61 aa6.48□□□□□ -1.37
UBXN2A-203ENST00000446425 MT1XP80297 61 aa6.48□□□□□ -1.37
UBXN2A-203ENST00000446425 MT1HP80294 61 aa6.45□□□□□ -1.38
UBXN2A-203ENST00000446425 HMCN2Q8NDA2 5059 aa6.43□□□□□ -1.38
UBXN2A-203ENST00000446425 FAT4Q6V0I7 4981 aa6.43□□□□□ -1.38
UBXN2A-203ENST00000446425 MT1BP07438 61 aa6.41□□□□□ -1.38
UBXN2A-203ENST00000446425 KRTAP9-8Q9BYQ0 159 aa6.4□□□□□ -1.39
UBXN2A-203ENST00000446425 UBR4Q5T4S7 5183 aa6.36□□□□□ -1.39
UBXN2A-203ENST00000446425 LCE2BO14633 110 aa6.35□□□□□ -1.39
UBXN2A-203ENST00000446425 KRTAP10-7P60409 375 aaPredicted RBP6.34□□□□□ -1.4
UBXN2A-203ENST00000446425 LCE3CQ5T5A8 94 aa6.27□□□□□ -1.41
UBXN2A-203ENST00000446425 KRTAP19-5Q3LI72 72 aa6.17□□□□□ -1.42
UBXN2A-203ENST00000446425 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
UBXN2A-203ENST00000446425 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
UBXN2A-203ENST00000446425 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
UBXN2A-203ENST00000446425 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
UBXN2A-203ENST00000446425 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
UBXN2A-203ENST00000446425 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
UBXN2A-203ENST00000446425 LCE2AQ5TA79 106 aaPredicted RBP5.98□□□□□ -1.45
UBXN2A-203ENST00000446425 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
UBXN2A-203ENST00000446425 KRTAP4-8A0A0G2JLE6 195 aa5.81□□□□□ -1.48
UBXN2A-203ENST00000446425 KRTAP4-8Q9BYQ9 185 aa5.81□□□□□ -1.48
UBXN2A-203ENST00000446425 KRTAP19-7Q3SYF9 63 aa5.77□□□□□ -1.49
UBXN2A-203ENST00000446425 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
UBXN2A-203ENST00000446425 KMT2DO14686 5537 aa5.75□□□□□ -1.49
UBXN2A-203ENST00000446425 MT1LQ93083 61 aa5.65□□□□□ -1.5
UBXN2A-203ENST00000446425 MT1EP04732 61 aa5.57□□□□□ -1.52
UBXN2A-203ENST00000446425 USH2AO75445 5202 aa5.5□□□□□ -1.53
UBXN2A-203ENST00000446425 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms