RNA–Protein interactions for RNA: ENST00000444184.5

LINC00963-205, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 1,887 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-205ENST00000444184 A8MU10 97 aa10□□□□□ -0.81
LINC00963-205ENST00000444184 LCA10Q71F78 164 aa10□□□□□ -0.81
LINC00963-205ENST00000444184 CDC42SE1Q9NRR8 79 aa9.98□□□□□ -0.81
LINC00963-205ENST00000444184 SEC61GP60059 68 aa9.95□□□□□ -0.82
LINC00963-205ENST00000444184 LRP2P98164 4655 aa9.92□□□□□ -0.82
LINC00963-205ENST00000444184 LPAP08519 4548 aa9.89□□□□□ -0.83
LINC00963-205ENST00000444184 UQCR11O14957 56 aa9.85□□□□□ -0.83
LINC00963-205ENST00000444184 HERC1Q15751 4861 aa9.83□□□□□ -0.84
LINC00963-205ENST00000444184 S4R3F8 94 aa9.81□□□□□ -0.84
LINC00963-205ENST00000444184 H1FX-AS1Q4G0G2 97 aa9.79□□□□□ -0.84
LINC00963-205ENST00000444184 SPATA8Q6RVD6 105 aa9.79□□□□□ -0.84
LINC00963-205ENST00000444184 SEC61BP60468 96 aaKnown RBP9.79□□□□□ -0.84
LINC00963-205ENST00000444184 MIR22HGQ0VDD5 57 aa9.79□□□□□ -0.84
LINC00963-205ENST00000444184 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
LINC00963-205ENST00000444184 RBM12B-AS1Q9P1G2 102 aa9.77□□□□□ -0.85
LINC00963-205ENST00000444184 PMAIP1Q13794 54 aa9.74□□□□□ -0.85
LINC00963-205ENST00000444184 A0A1B0GU33 70 aa9.69□□□□□ -0.86
LINC00963-205ENST00000444184 HMCN2Q8NDA2 5059 aa9.61□□□□□ -0.87
LINC00963-205ENST00000444184 A6NN06 94 aa9.61□□□□□ -0.87
LINC00963-205ENST00000444184 H0YAA0 97 aa9.58□□□□□ -0.88
LINC00963-205ENST00000444184 KRTAP4-1Q9BYQ7 146 aa9.56□□□□□ -0.88
LINC00963-205ENST00000444184 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
LINC00963-205ENST00000444184 KRTAP10-6P60371 365 aaPredicted RBP9.55□□□□□ -0.88
LINC00963-205ENST00000444184 CSAG1Q6PB30 78 aa9.55□□□□□ -0.88
LINC00963-205ENST00000444184 KRTAP3-2Q9BYR7 98 aa9.53□□□□□ -0.88
LINC00963-205ENST00000444184 ADM2Q7Z4H4 148 aa9.45□□□□□ -0.9
LINC00963-205ENST00000444184 P0C880 135 aa9.43□□□□□ -0.9
LINC00963-205ENST00000444184 KTN1-AS1Q86SY8 53 aa9.42□□□□□ -0.9
LINC00963-205ENST00000444184 KRTAP13-4Q3LI77 160 aa9.36□□□□□ -0.91
LINC00963-205ENST00000444184 KRTAP19-2Q3LHN2 52 aa9.34□□□□□ -0.91
LINC00963-205ENST00000444184 K7ERS5 55 aa9.28□□□□□ -0.92
LINC00963-205ENST00000444184 MUC2Q02817 5179 aa9.27□□□□□ -0.92
LINC00963-205ENST00000444184 A0A0D9SG42 100 aa9.27□□□□□ -0.93
LINC00963-205ENST00000444184 UBR4Q5T4S7 5183 aa9.24□□□□□ -0.93
LINC00963-205ENST00000444184 M0QZ58 72 aa9.2□□□□□ -0.94
LINC00963-205ENST00000444184 FLGP20930 4061 aaPredicted RBP9.14□□□□□ -0.95
LINC00963-205ENST00000444184 PRAC1Q96KF2 57 aa9.11□□□□□ -0.95
LINC00963-205ENST00000444184 RNF213Q63HN8 5207 aa9.1□□□□□ -0.95
LINC00963-205ENST00000444184 R4GN34 69 aa9.07□□□□□ -0.96
LINC00963-205ENST00000444184 KRTAP12-2P59991 146 aa9.02□□□□□ -0.96
LINC00963-205ENST00000444184 SPINT4Q6UDR6 99 aa9.02□□□□□ -0.96
LINC00963-205ENST00000444184 LCE2CQ5TA81 110 aa9.02□□□□□ -0.97
LINC00963-205ENST00000444184 KRTAP12-1P59990 96 aa9.01□□□□□ -0.97
LINC00963-205ENST00000444184 LORP23490 312 aaPredicted RBP9□□□□□ -0.97
LINC00963-205ENST00000444184 LINC01554Q52M75 96 aa8.97□□□□□ -0.97
LINC00963-205ENST00000444184 ROMO1P60602 79 aa8.96□□□□□ -0.98
LINC00963-205ENST00000444184 FAT4Q6V0I7 4981 aa8.88□□□□□ -0.99
LINC00963-205ENST00000444184 MT1HP80294 61 aa8.81□□□□□ -1
LINC00963-205ENST00000444184 CRIPTQ9P021 101 aa8.8□□□□□ -1
LINC00963-205ENST00000444184 M0R2T5 61 aa8.79□□□□□ -1
LINC00963-205ENST00000444184 KRTAP25-1Q3LHN0 102 aa8.77□□□□□ -1.01
LINC00963-205ENST00000444184 CAMK2N1Q7Z7J9 78 aa8.56□□□□□ -1.04
LINC00963-205ENST00000444184 C10orf95Q9H7T3 257 aa8.55□□□□□ -1.04
LINC00963-205ENST00000444184 MT2AP02795 61 aa8.53□□□□□ -1.04
LINC00963-205ENST00000444184 SPRR2GQ9BYE4 73 aa8.52□□□□□ -1.05
LINC00963-205ENST00000444184 KRTAP10-10P60014 251 aa8.51□□□□□ -1.05
LINC00963-205ENST00000444184 KRTAP9-8Q9BYQ0 159 aa8.51□□□□□ -1.05
LINC00963-205ENST00000444184 MT1FP04733 61 aa8.49□□□□□ -1.05
LINC00963-205ENST00000444184 KRTAP19-1Q8IUB9 90 aa8.48□□□□□ -1.05
LINC00963-205ENST00000444184 LCE2AQ5TA79 106 aaPredicted RBP8.45□□□□□ -1.06
LINC00963-205ENST00000444184 PLAC4Q8WY50 150 aa8.38□□□□□ -1.07
LINC00963-205ENST00000444184 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
LINC00963-205ENST00000444184 KRTAP9-3Q9BYQ3 159 aa8.19□□□□□ -1.1
LINC00963-205ENST00000444184 TNP1P09430 55 aa8.18□□□□□ -1.1
LINC00963-205ENST00000444184 PP632Q6XCG6 107 aa8.12□□□□□ -1.11
LINC00963-205ENST00000444184 MT1BP07438 61 aa8.11□□□□□ -1.11
LINC00963-205ENST00000444184 KRTAP23-1A1A580 65 aa7.99□□□□□ -1.13
LINC00963-205ENST00000444184 LCE2BO14633 110 aa7.96□□□□□ -1.13
LINC00963-205ENST00000444184 KRTAP10-5P60370 271 aa7.94□□□□□ -1.14
LINC00963-205ENST00000444184 MT1XP80297 61 aa7.94□□□□□ -1.14
LINC00963-205ENST00000444184 KRTAP15-1Q3LI76 137 aa7.86□□□□□ -1.15
LINC00963-205ENST00000444184 KRTAP9-2Q9BYQ4 174 aa7.81□□□□□ -1.16
LINC00963-205ENST00000444184 PRO2289Q9P1D8 64 aa7.81□□□□□ -1.16
LINC00963-205ENST00000444184 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
LINC00963-205ENST00000444184 LCE2DQ5TA82 110 aaPredicted RBP7.75□□□□□ -1.17
LINC00963-205ENST00000444184 USH2AO75445 5202 aa7.75□□□□□ -1.17
LINC00963-205ENST00000444184 FSIP2Q5CZC0 6907 aa7.7□□□□□ -1.18
LINC00963-205ENST00000444184 KRTAP10-7P60409 375 aaPredicted RBP7.66□□□□□ -1.18
LINC00963-205ENST00000444184 KRTAP10-12P60413 245 aa7.66□□□□□ -1.18
LINC00963-205ENST00000444184 KRTAP8-1Q8IUC2 63 aa7.6□□□□□ -1.19
LINC00963-205ENST00000444184 SSPOA2VEC9 5147 aa7.48□□□□□ -1.21
LINC00963-205ENST00000444184 NDUFAF8A1L188 74 aa7.45□□□□□ -1.22
LINC00963-205ENST00000444184 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
LINC00963-205ENST00000444184 KRTAP19-6Q3LI70 58 aa7.45□□□□□ -1.22
LINC00963-205ENST00000444184 KRTAP9-6A0A140TA67 174 aa7.41□□□□□ -1.22
LINC00963-205ENST00000444184 CRCT1Q9UGL9 99 aa7.41□□□□□ -1.22
LINC00963-205ENST00000444184 SPRR5A0A1B0GTR4 108 aa7.34□□□□□ -1.23
LINC00963-205ENST00000444184 LUZP6Q538Z0 58 aa7.33□□□□□ -1.24
LINC00963-205ENST00000444184 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
LINC00963-205ENST00000444184 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
LINC00963-205ENST00000444184 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
LINC00963-205ENST00000444184 KMT2DO14686 5537 aa7.27□□□□□ -1.25
LINC00963-205ENST00000444184 FCGBPQ9Y6R7 5405 aaPredicted RBP7.19□□□□□ -1.26
LINC00963-205ENST00000444184 H3BS24 57 aa7.15□□□□□ -1.27
LINC00963-205ENST00000444184 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
LINC00963-205ENST00000444184 LCE3CQ5T5A8 94 aa6.98□□□□□ -1.29
LINC00963-205ENST00000444184 MACF1Q9UPN3 7388 aaKnown RBP6.93□□□□□ -1.3
LINC00963-205ENST00000444184 MT1EP04732 61 aa6.93□□□□□ -1.3
LINC00963-205ENST00000444184 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.9□□□□□ -1.31
LINC00963-205ENST00000444184 MT1LQ93083 61 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms