RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 SEC61BP60468 96 aaKnown RBP1.7□□□□□ -2.14
LIG4-203ENST00000442234 NOTCH2NLQ7Z3S9 236 aa1.7□□□□□ -2.14
LIG4-203ENST00000442234 MMP24-AS1A0A0U1RRL7 71 aa1.69□□□□□ -2.14
LIG4-203ENST00000442234 PLECQ15149 4684 aaKnown RBP1.69□□□□□ -2.14
LIG4-203ENST00000442234 APLNQ9ULZ1 77 aa1.69□□□□□ -2.14
LIG4-203ENST00000442234 PRLHP81277 87 aa1.69□□□□□ -2.14
LIG4-203ENST00000442234 MRPL34Q9BQ48 92 aaKnown RBP1.69□□□□□ -2.14
LIG4-203ENST00000442234 FAT1Q14517 4588 aa1.69□□□□□ -2.14
LIG4-203ENST00000442234 KRTAP10-1P60331 282 aa1.68□□□□□ -2.14
LIG4-203ENST00000442234 LELP1Q5T871 98 aa1.68□□□□□ -2.14
LIG4-203ENST00000442234 SPINK6Q6UWN8 80 aa1.68□□□□□ -2.14
LIG4-203ENST00000442234 IGLV7-43P04211 117 aa1.67□□□□□ -2.14
LIG4-203ENST00000442234 FAM168BA1KXE4 195 aa1.67□□□□□ -2.14
LIG4-203ENST00000442234 Q8N1X5 172 aa1.66□□□□□ -2.14
LIG4-203ENST00000442234 PRR34Q9NV39 138 aa1.66□□□□□ -2.14
LIG4-203ENST00000442234 KRTAP1-5Q9BYS1 174 aa1.66□□□□□ -2.14
LIG4-203ENST00000442234 DNAH5Q8TE73 4624 aa1.66□□□□□ -2.14
LIG4-203ENST00000442234 M0R2T5 61 aa1.66□□□□□ -2.14
LIG4-203ENST00000442234 LINC00472Q9H8W2 130 aa1.66□□□□□ -2.14
LIG4-203ENST00000442234 MYCBP2O75592 4640 aa1.66□□□□□ -2.14
LIG4-203ENST00000442234 A0A1B0GVX0 72 aa1.66□□□□□ -2.14
LIG4-203ENST00000442234 LINC00304Q8N9R0 145 aa1.66□□□□□ -2.14
LIG4-203ENST00000442234 IGKV2D-30A0A075B6S6 120 aa1.65□□□□□ -2.14
LIG4-203ENST00000442234 IGKV2-30P06310 120 aa1.65□□□□□ -2.14
LIG4-203ENST00000442234 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.14
LIG4-203ENST00000442234 CSNK1G2-AS1Q8NCQ2 148 aa1.65□□□□□ -2.15
LIG4-203ENST00000442234 LRP1BQ9NZR2 4599 aa1.65□□□□□ -2.15
LIG4-203ENST00000442234 LRP2P98164 4655 aa1.65□□□□□ -2.15
LIG4-203ENST00000442234 APOBP04114 4563 aaKnown RBP1.65□□□□□ -2.15
LIG4-203ENST00000442234 A0A087WTM6 91 aa1.65□□□□□ -2.15
LIG4-203ENST00000442234 Q5W150 140 aa1.64□□□□□ -2.15
LIG4-203ENST00000442234 KRTAP26-1Q6PEX3 210 aa1.64□□□□□ -2.15
LIG4-203ENST00000442234 C15orf56Q8N910 161 aa1.64□□□□□ -2.15
LIG4-203ENST00000442234 PSORS1C2Q9UIG4 136 aa1.64□□□□□ -2.15
LIG4-203ENST00000442234 A0A1B0GU33 70 aa1.63□□□□□ -2.15
LIG4-203ENST00000442234 GIG44P09565 113 aaPredicted RBP1.63□□□□□ -2.15
LIG4-203ENST00000442234 SPRR1AP35321 89 aa1.63□□□□□ -2.15
LIG4-203ENST00000442234 LINC01556Q5JQF7 62 aa1.63□□□□□ -2.15
LIG4-203ENST00000442234 KRTAP11-1Q8IUC1 163 aa1.63□□□□□ -2.15
LIG4-203ENST00000442234 CIRBP-AS1Q8TBR5 109 aa1.63□□□□□ -2.15
LIG4-203ENST00000442234 KRTAP4-16G5E9R7 235 aaPredicted RBP1.63□□□□□ -2.15
LIG4-203ENST00000442234 ANAPC11Q9NYG5 84 aa1.63□□□□□ -2.15
LIG4-203ENST00000442234 COX6B2Q6YFQ2 88 aa1.62□□□□□ -2.15
LIG4-203ENST00000442234 Q96NJ1 140 aa1.62□□□□□ -2.15
LIG4-203ENST00000442234 PANO1I0J062 215 aa1.61□□□□□ -2.15
LIG4-203ENST00000442234 C14orf177Q52M58 125 aa1.61□□□□□ -2.15
LIG4-203ENST00000442234 H0YAA0 97 aa1.6□□□□□ -2.15
LIG4-203ENST00000442234 KRTAP5-9P26371 169 aa1.59□□□□□ -2.15
LIG4-203ENST00000442234 FLGP20930 4061 aaPredicted RBP1.59□□□□□ -2.15
LIG4-203ENST00000442234 HMCN2Q8NDA2 5059 aa1.59□□□□□ -2.16
LIG4-203ENST00000442234 Q6ZSA8 131 aa1.59□□□□□ -2.16
LIG4-203ENST00000442234 C10orf95Q9H7T3 257 aa1.59□□□□□ -2.16
LIG4-203ENST00000442234 MUC17Q685J3 4493 aa1.59□□□□□ -2.16
LIG4-203ENST00000442234 A0A0D9SG42 100 aa1.58□□□□□ -2.16
LIG4-203ENST00000442234 H1FX-AS1Q4G0G2 97 aa1.58□□□□□ -2.16
LIG4-203ENST00000442234 KRTAP15-1Q3LI76 137 aa1.58□□□□□ -2.16
LIG4-203ENST00000442234 LRP1Q07954 4544 aaKnown RBP1.58□□□□□ -2.16
LIG4-203ENST00000442234 SPRR1BP22528 89 aa1.57□□□□□ -2.16
LIG4-203ENST00000442234 RPL37P61927 97 aaKnown RBP1.57□□□□□ -2.16
LIG4-203ENST00000442234 CAMK2N1Q7Z7J9 78 aa1.57□□□□□ -2.16
LIG4-203ENST00000442234 SPACA4Q8TDM5 124 aa1.57□□□□□ -2.16
LIG4-203ENST00000442234 A0A1B0GVY2 172 aa1.56□□□□□ -2.16
LIG4-203ENST00000442234 C9orf92A6NGG3 77 aa1.56□□□□□ -2.16
LIG4-203ENST00000442234 FAT4Q6V0I7 4981 aa1.56□□□□□ -2.16
LIG4-203ENST00000442234 TPRXLQ17RH7 258 aa1.55□□□□□ -2.16
LIG4-203ENST00000442234 KRTAP7-1Q8IUC3 87 aa1.55□□□□□ -2.16
LIG4-203ENST00000442234 TYMSOSQ8TAI1 123 aa1.55□□□□□ -2.16
LIG4-203ENST00000442234 DSTQ03001 7570 aaKnown RBP1.55□□□□□ -2.16
LIG4-203ENST00000442234 MUC2Q02817 5179 aa1.54□□□□□ -2.16
LIG4-203ENST00000442234 H3BNG1 76 aa1.53□□□□□ -2.16
LIG4-203ENST00000442234 KRTAP13-3Q3SY46 172 aa1.53□□□□□ -2.16
LIG4-203ENST00000442234 SYNE2Q8WXH0 6885 aaKnown RBP1.5□□□□□ -2.17
LIG4-203ENST00000442234 PLAC4Q8WY50 150 aa1.5□□□□□ -2.17
LIG4-203ENST00000442234 Q6ZRN7 208 aaPredicted RBP1.49□□□□□ -2.17
LIG4-203ENST00000442234 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
LIG4-203ENST00000442234 S4R3F8 94 aa1.48□□□□□ -2.17
LIG4-203ENST00000442234 LCE1AQ5T7P2 110 aa1.47□□□□□ -2.17
LIG4-203ENST00000442234 LPAP08519 4548 aa1.47□□□□□ -2.17
LIG4-203ENST00000442234 KMT2DO14686 5537 aa1.47□□□□□ -2.17
LIG4-203ENST00000442234 KRTAP13-1Q8IUC0 172 aa1.46□□□□□ -2.18
LIG4-203ENST00000442234 MACF1Q9UPN3 7388 aaKnown RBP1.45□□□□□ -2.18
LIG4-203ENST00000442234 GPR98Q8WXG9 6306 aa1.45□□□□□ -2.18
LIG4-203ENST00000442234 R4GN34 69 aa1.44□□□□□ -2.18
LIG4-203ENST00000442234 OBSCNQ5VST9 7968 aa1.44□□□□□ -2.18
LIG4-203ENST00000442234 PRO2289Q9P1D8 64 aa1.43□□□□□ -2.18
LIG4-203ENST00000442234 USH2AO75445 5202 aa1.43□□□□□ -2.18
LIG4-203ENST00000442234 MT1HL1P0DM35 61 aa1.43□□□□□ -2.18
LIG4-203ENST00000442234 KRTAP10-8P60410 259 aa1.42□□□□□ -2.18
LIG4-203ENST00000442234 KRTAP12-2P59991 146 aa1.42□□□□□ -2.18
LIG4-203ENST00000442234 KRTAP13-4Q3LI77 160 aa1.41□□□□□ -2.18
LIG4-203ENST00000442234 SSPOA2VEC9 5147 aa1.41□□□□□ -2.18
LIG4-203ENST00000442234 CRCT1Q9UGL9 99 aa1.4□□□□□ -2.19
LIG4-203ENST00000442234 KRTAP10-10P60014 251 aa1.39□□□□□ -2.19
LIG4-203ENST00000442234 KRTAP12-1P59990 96 aa1.38□□□□□ -2.19
LIG4-203ENST00000442234 KRTAP10-6P60371 365 aaPredicted RBP1.38□□□□□ -2.19
LIG4-203ENST00000442234 KRTAP13-2Q52LG2 175 aa1.37□□□□□ -2.19
LIG4-203ENST00000442234 KRTAP5-4Q6L8H1 288 aa1.37□□□□□ -2.19
LIG4-203ENST00000442234 M0QZ58 72 aa1.37□□□□□ -2.19
LIG4-203ENST00000442234 PP632Q6XCG6 107 aa1.36□□□□□ -2.19
LIG4-203ENST00000442234 INE1O15225 51 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms