RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 DMAC1Q96GE9 116 aa4.04□□□□□ -1.76
CDC42BPA-208ENST00000442054 C7orf65Q6ZTY9 151 aa4.04□□□□□ -1.76
CDC42BPA-208ENST00000442054 PRR15LQ9BU68 103 aa4.03□□□□□ -1.76
CDC42BPA-208ENST00000442054 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.77
CDC42BPA-208ENST00000442054 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
CDC42BPA-208ENST00000442054 FAT3Q8TDW7 4589 aa4.02□□□□□ -1.77
CDC42BPA-208ENST00000442054 SPINK7P58062 85 aa4.02□□□□□ -1.77
CDC42BPA-208ENST00000442054 XP32Q5T750 250 aa4.02□□□□□ -1.77
CDC42BPA-208ENST00000442054 CHKB-CPT1BH3BT56 60 aa3.99□□□□□ -1.77
CDC42BPA-208ENST00000442054 MYCBP2O75592 4640 aa3.99□□□□□ -1.77
CDC42BPA-208ENST00000442054 RPL37P61927 97 aaKnown RBP3.99□□□□□ -1.77
CDC42BPA-208ENST00000442054 SPTSSBQ8NFR3 76 aa3.98□□□□□ -1.77
CDC42BPA-208ENST00000442054 LRP1Q07954 4544 aaKnown RBP3.97□□□□□ -1.77
CDC42BPA-208ENST00000442054 ACYP2P14621 99 aa3.93□□□□□ -1.78
CDC42BPA-208ENST00000442054 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
CDC42BPA-208ENST00000442054 A6NED7 52 aa3.91□□□□□ -1.78
CDC42BPA-208ENST00000442054 SPATA8Q6RVD6 105 aa3.91□□□□□ -1.78
CDC42BPA-208ENST00000442054 HERC1Q15751 4861 aa3.9□□□□□ -1.79
CDC42BPA-208ENST00000442054 KRTAP3-1Q9BYR8 98 aa3.89□□□□□ -1.79
CDC42BPA-208ENST00000442054 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
CDC42BPA-208ENST00000442054 C20orf166-AS1Q96NR2 134 aa3.85□□□□□ -1.79
CDC42BPA-208ENST00000442054 A8MUU9 505 aa3.85□□□□□ -1.79
CDC42BPA-208ENST00000442054 LRP2P98164 4655 aa3.84□□□□□ -1.79
CDC42BPA-208ENST00000442054 ADM2Q7Z4H4 148 aa3.84□□□□□ -1.79
CDC42BPA-208ENST00000442054 LPAP08519 4548 aa3.83□□□□□ -1.8
CDC42BPA-208ENST00000442054 A0A1B0GU69 56 aa3.8□□□□□ -1.8
CDC42BPA-208ENST00000442054 H0YAA0 97 aa3.78□□□□□ -1.8
CDC42BPA-208ENST00000442054 CSAG1Q6PB30 78 aa3.77□□□□□ -1.81
CDC42BPA-208ENST00000442054 MIR22HGQ0VDD5 57 aa3.76□□□□□ -1.81
CDC42BPA-208ENST00000442054 UQCR11O14957 56 aa3.76□□□□□ -1.81
CDC42BPA-208ENST00000442054 KRTAP23-1A1A580 65 aa3.75□□□□□ -1.81
CDC42BPA-208ENST00000442054 UBR4Q5T4S7 5183 aa3.74□□□□□ -1.81
CDC42BPA-208ENST00000442054 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
CDC42BPA-208ENST00000442054 P0C880 135 aa3.74□□□□□ -1.81
CDC42BPA-208ENST00000442054 H1FX-AS1Q4G0G2 97 aa3.73□□□□□ -1.81
CDC42BPA-208ENST00000442054 S4R3F8 94 aa3.72□□□□□ -1.81
CDC42BPA-208ENST00000442054 ROMO1P60602 79 aa3.71□□□□□ -1.82
CDC42BPA-208ENST00000442054 HMCN2Q8NDA2 5059 aa3.69□□□□□ -1.82
CDC42BPA-208ENST00000442054 KRTAP10-6P60371 365 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-208ENST00000442054 MUC17Q685J3 4493 aa3.69□□□□□ -1.82
CDC42BPA-208ENST00000442054 KRTAP4-1Q9BYQ7 146 aa3.68□□□□□ -1.82
CDC42BPA-208ENST00000442054 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
CDC42BPA-208ENST00000442054 KRTAP13-4Q3LI77 160 aa3.64□□□□□ -1.83
CDC42BPA-208ENST00000442054 A0A1B0GU33 70 aa3.62□□□□□ -1.83
CDC42BPA-208ENST00000442054 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
CDC42BPA-208ENST00000442054 MT1HP80294 61 aa3.59□□□□□ -1.83
CDC42BPA-208ENST00000442054 R4GN34 69 aa3.58□□□□□ -1.84
CDC42BPA-208ENST00000442054 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
CDC42BPA-208ENST00000442054 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
CDC42BPA-208ENST00000442054 FLGP20930 4061 aaPredicted RBP3.54□□□□□ -1.84
CDC42BPA-208ENST00000442054 KRTAP9-2Q9BYQ4 174 aa3.54□□□□□ -1.84
CDC42BPA-208ENST00000442054 PLAC4Q8WY50 150 aa3.52□□□□□ -1.85
CDC42BPA-208ENST00000442054 M0QZ58 72 aa3.51□□□□□ -1.85
CDC42BPA-208ENST00000442054 FAT4Q6V0I7 4981 aa3.5□□□□□ -1.85
CDC42BPA-208ENST00000442054 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
CDC42BPA-208ENST00000442054 MUC2Q02817 5179 aa3.48□□□□□ -1.85
CDC42BPA-208ENST00000442054 KRTAP19-2Q3LHN2 52 aa3.48□□□□□ -1.85
CDC42BPA-208ENST00000442054 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
CDC42BPA-208ENST00000442054 CAMK2N1Q7Z7J9 78 aa3.47□□□□□ -1.85
CDC42BPA-208ENST00000442054 CRIPTQ9P021 101 aa3.47□□□□□ -1.85
CDC42BPA-208ENST00000442054 KRTAP12-1P59990 96 aa3.46□□□□□ -1.86
CDC42BPA-208ENST00000442054 A0A0D9SG42 100 aa3.43□□□□□ -1.86
CDC42BPA-208ENST00000442054 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
CDC42BPA-208ENST00000442054 KRTAP9-6A0A140TA67 174 aa3.42□□□□□ -1.86
CDC42BPA-208ENST00000442054 SPINT4Q6UDR6 99 aa3.42□□□□□ -1.86
CDC42BPA-208ENST00000442054 MT2AP02795 61 aa3.4□□□□□ -1.86
CDC42BPA-208ENST00000442054 K7ERS5 55 aa3.4□□□□□ -1.87
CDC42BPA-208ENST00000442054 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
CDC42BPA-208ENST00000442054 MT1FP04733 61 aa3.36□□□□□ -1.87
CDC42BPA-208ENST00000442054 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
CDC42BPA-208ENST00000442054 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
CDC42BPA-208ENST00000442054 KRTAP9-8Q9BYQ0 159 aa3.31□□□□□ -1.88
CDC42BPA-208ENST00000442054 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
CDC42BPA-208ENST00000442054 KRTAP19-1Q8IUB9 90 aa3.22□□□□□ -1.89
CDC42BPA-208ENST00000442054 KRTAP9-3Q9BYQ3 159 aa3.21□□□□□ -1.9
CDC42BPA-208ENST00000442054 LCE4AQ5TA78 99 aa3.13□□□□□ -1.91
CDC42BPA-208ENST00000442054 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
CDC42BPA-208ENST00000442054 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
CDC42BPA-208ENST00000442054 KRTAP9-4Q9BYQ2 154 aa3.09□□□□□ -1.91
CDC42BPA-208ENST00000442054 TNP1P09430 55 aa3.09□□□□□ -1.92
CDC42BPA-208ENST00000442054 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
CDC42BPA-208ENST00000442054 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-208ENST00000442054 KRTAP8-1Q8IUC2 63 aa3.08□□□□□ -1.92
CDC42BPA-208ENST00000442054 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
CDC42BPA-208ENST00000442054 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
CDC42BPA-208ENST00000442054 KRTAP19-8Q3LI54 63 aa3.05□□□□□ -1.92
CDC42BPA-208ENST00000442054 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
CDC42BPA-208ENST00000442054 MT1BP07438 61 aa3.04□□□□□ -1.92
CDC42BPA-208ENST00000442054 PP632Q6XCG6 107 aa3.04□□□□□ -1.92
CDC42BPA-208ENST00000442054 USH2AO75445 5202 aa3.03□□□□□ -1.92
CDC42BPA-208ENST00000442054 KRTAP10-5P60370 271 aa3.02□□□□□ -1.93
CDC42BPA-208ENST00000442054 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
CDC42BPA-208ENST00000442054 LOC100996750A0A140TA64 210 aa2.96□□□□□ -1.94
CDC42BPA-208ENST00000442054 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
CDC42BPA-208ENST00000442054 SSPOA2VEC9 5147 aa2.96□□□□□ -1.94
CDC42BPA-208ENST00000442054 FCGBPQ9Y6R7 5405 aaPredicted RBP2.95□□□□□ -1.94
CDC42BPA-208ENST00000442054 SPRR2EP22531 72 aa2.94□□□□□ -1.94
CDC42BPA-208ENST00000442054 SPRR2BP35325 72 aa2.94□□□□□ -1.94
CDC42BPA-208ENST00000442054 SPRR2AP35326 72 aa2.94□□□□□ -1.94
CDC42BPA-208ENST00000442054 KRTAP10-12P60413 245 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms