RNA–Protein interactions for RNA: ENST00000442011.6

TGFBI-201, Transcript of transforming growth factor beta induced, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBI, Length 2,804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBI-201ENST00000442011 PKHD1P08F94 4074 aa6.4□□□□□ -1.38
TGFBI-201ENST00000442011 KRTAP3-2Q9BYR7 98 aa6.39□□□□□ -1.39
TGFBI-201ENST00000442011 SACSQ9NZJ4 4579 aa6.38□□□□□ -1.39
TGFBI-201ENST00000442011 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
TGFBI-201ENST00000442011 S4R3F8 94 aa6.36□□□□□ -1.39
TGFBI-201ENST00000442011 FAT1Q14517 4588 aa6.35□□□□□ -1.39
TGFBI-201ENST00000442011 KRTAP12-2P59991 146 aa6.34□□□□□ -1.4
TGFBI-201ENST00000442011 PKHD1L1Q86WI1 4243 aa6.31□□□□□ -1.4
TGFBI-201ENST00000442011 KRTAP10-8P60410 259 aa6.29□□□□□ -1.4
TGFBI-201ENST00000442011 KRTAP21-3Q3LHN1 58 aa6.27□□□□□ -1.41
TGFBI-201ENST00000442011 DYNC1H1Q14204 4646 aaKnown RBP6.26□□□□□ -1.41
TGFBI-201ENST00000442011 APOBP04114 4563 aaKnown RBP6.23□□□□□ -1.41
TGFBI-201ENST00000442011 KRTAP12-1P59990 96 aa6.23□□□□□ -1.41
TGFBI-201ENST00000442011 KRTAP10-4P60372 401 aaPredicted RBP6.21□□□□□ -1.42
TGFBI-201ENST00000442011 HSPG2P98160 4391 aa6.2□□□□□ -1.42
TGFBI-201ENST00000442011 XP32Q5T750 250 aa6.17□□□□□ -1.42
TGFBI-201ENST00000442011 J3QL48 77 aa6.16□□□□□ -1.42
TGFBI-201ENST00000442011 FAT3Q8TDW7 4589 aa6.16□□□□□ -1.42
TGFBI-201ENST00000442011 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
TGFBI-201ENST00000442011 LRP1Q07954 4544 aaKnown RBP6.12□□□□□ -1.43
TGFBI-201ENST00000442011 M0QZ58 72 aa6.05□□□□□ -1.44
TGFBI-201ENST00000442011 TNXBP22105 4242 aa6.03□□□□□ -1.44
TGFBI-201ENST00000442011 A0A1B0GVY2 172 aa6.03□□□□□ -1.44
TGFBI-201ENST00000442011 LPAP08519 4548 aa6.01□□□□□ -1.45
TGFBI-201ENST00000442011 PLAC4Q8WY50 150 aa5.97□□□□□ -1.45
TGFBI-201ENST00000442011 R4GN34 69 aa5.93□□□□□ -1.46
TGFBI-201ENST00000442011 LUZP6Q538Z0 58 aa5.91□□□□□ -1.46
TGFBI-201ENST00000442011 KMT2CQ8NEZ4 4911 aaKnown RBP5.9□□□□□ -1.47
TGFBI-201ENST00000442011 Q5VSD8 79 aa5.89□□□□□ -1.47
TGFBI-201ENST00000442011 LRP2P98164 4655 aa5.87□□□□□ -1.47
TGFBI-201ENST00000442011 RYR2Q92736 4967 aa5.85□□□□□ -1.47
TGFBI-201ENST00000442011 LORP23490 312 aaPredicted RBP5.8□□□□□ -1.48
TGFBI-201ENST00000442011 MT1HL1P0DM35 61 aa5.73□□□□□ -1.49
TGFBI-201ENST00000442011 KRTAP17-1Q9BYP8 105 aa5.71□□□□□ -1.49
TGFBI-201ENST00000442011 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
TGFBI-201ENST00000442011 PP632Q6XCG6 107 aa5.67□□□□□ -1.5
TGFBI-201ENST00000442011 RYR3Q15413 4870 aa5.65□□□□□ -1.51
TGFBI-201ENST00000442011 RYR1P21817 5038 aa5.63□□□□□ -1.51
TGFBI-201ENST00000442011 KIAA1109Q2LD37 5005 aa5.59□□□□□ -1.51
TGFBI-201ENST00000442011 SEC61BP60468 96 aaKnown RBP5.59□□□□□ -1.51
TGFBI-201ENST00000442011 ABCA13Q86UQ4 5058 aa5.56□□□□□ -1.52
TGFBI-201ENST00000442011 MUC17Q685J3 4493 aa5.51□□□□□ -1.53
TGFBI-201ENST00000442011 KRTAP4-1Q9BYQ7 146 aa5.5□□□□□ -1.53
TGFBI-201ENST00000442011 TNP1P09430 55 aa5.47□□□□□ -1.53
TGFBI-201ENST00000442011 EPPK1P58107 5090 aaKnown RBP5.45□□□□□ -1.54
TGFBI-201ENST00000442011 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
TGFBI-201ENST00000442011 KRTAP19-2Q3LHN2 52 aa5.35□□□□□ -1.55
TGFBI-201ENST00000442011 MUC2Q02817 5179 aa5.33□□□□□ -1.56
TGFBI-201ENST00000442011 KRTAP4-5Q9BYR2 181 aa5.33□□□□□ -1.56
TGFBI-201ENST00000442011 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
TGFBI-201ENST00000442011 FLGP20930 4061 aaPredicted RBP5.21□□□□□ -1.58
TGFBI-201ENST00000442011 PCLOQ9Y6V0 5065 aa5.17□□□□□ -1.58
TGFBI-201ENST00000442011 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
TGFBI-201ENST00000442011 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
TGFBI-201ENST00000442011 HERC1Q15751 4861 aa5.11□□□□□ -1.59
TGFBI-201ENST00000442011 HERC2O95714 4834 aa5.11□□□□□ -1.59
TGFBI-201ENST00000442011 FAT4Q6V0I7 4981 aa5.04□□□□□ -1.6
TGFBI-201ENST00000442011 KRTAP19-1Q8IUB9 90 aa5.04□□□□□ -1.6
TGFBI-201ENST00000442011 BIRC6Q9NR09 4857 aa5.03□□□□□ -1.6
TGFBI-201ENST00000442011 INE1O15225 51 aa5.03□□□□□ -1.6
TGFBI-201ENST00000442011 SPRR2GQ9BYE4 73 aa5.03□□□□□ -1.6
TGFBI-201ENST00000442011 M0R2T5 61 aa4.97□□□□□ -1.61
TGFBI-201ENST00000442011 KRTAP8-1Q8IUC2 63 aa4.94□□□□□ -1.62
TGFBI-201ENST00000442011 LCE2DQ5TA82 110 aaPredicted RBP4.92□□□□□ -1.62
TGFBI-201ENST00000442011 LCE2CQ5TA81 110 aa4.91□□□□□ -1.62
TGFBI-201ENST00000442011 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
TGFBI-201ENST00000442011 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
TGFBI-201ENST00000442011 HMCN2Q8NDA2 5059 aa4.85□□□□□ -1.63
TGFBI-201ENST00000442011 MT1FP04733 61 aa4.84□□□□□ -1.63
TGFBI-201ENST00000442011 KRTAP10-12P60413 245 aa4.82□□□□□ -1.64
TGFBI-201ENST00000442011 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
TGFBI-201ENST00000442011 MT2AP02795 61 aa4.8□□□□□ -1.64
TGFBI-201ENST00000442011 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
TGFBI-201ENST00000442011 MT1XP80297 61 aa4.78□□□□□ -1.64
TGFBI-201ENST00000442011 MT1HP80294 61 aa4.78□□□□□ -1.65
TGFBI-201ENST00000442011 RNF213Q63HN8 5207 aa4.74□□□□□ -1.65
TGFBI-201ENST00000442011 KRTAP10-7P60409 375 aaPredicted RBP4.73□□□□□ -1.65
TGFBI-201ENST00000442011 MT1BP07438 61 aa4.72□□□□□ -1.65
TGFBI-201ENST00000442011 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
TGFBI-201ENST00000442011 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
TGFBI-201ENST00000442011 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
TGFBI-201ENST00000442011 KRTAP19-5Q3LI72 72 aa4.59□□□□□ -1.68
TGFBI-201ENST00000442011 LCE2AQ5TA79 106 aaPredicted RBP4.56□□□□□ -1.68
TGFBI-201ENST00000442011 KMT2DO14686 5537 aa4.53□□□□□ -1.68
TGFBI-201ENST00000442011 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
TGFBI-201ENST00000442011 KRTAP9-3Q9BYQ3 159 aa4.47□□□□□ -1.69
TGFBI-201ENST00000442011 USH2AO75445 5202 aa4.4□□□□□ -1.7
TGFBI-201ENST00000442011 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.7
TGFBI-201ENST00000442011 KRTAP4-8Q9BYQ9 185 aa4.4□□□□□ -1.7
TGFBI-201ENST00000442011 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
TGFBI-201ENST00000442011 LCE2BO14633 110 aa4.38□□□□□ -1.71
TGFBI-201ENST00000442011 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
TGFBI-201ENST00000442011 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
TGFBI-201ENST00000442011 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
TGFBI-201ENST00000442011 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
TGFBI-201ENST00000442011 MT1LQ93083 61 aa4.15□□□□□ -1.74
TGFBI-201ENST00000442011 MT1EP04732 61 aa4.09□□□□□ -1.75
TGFBI-201ENST00000442011 LOC100996750A0A140TA64 210 aa4.08□□□□□ -1.76
TGFBI-201ENST00000442011 KRTAP12-4P60329 112 aa4.04□□□□□ -1.76
TGFBI-201ENST00000442011 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms