RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 S4R3F8 94 aa10.31□□□□□ -0.76
VPS13B-204ENST00000441350 LCA10Q71F78 164 aa10.28□□□□□ -0.76
VPS13B-204ENST00000441350 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
VPS13B-204ENST00000441350 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
VPS13B-204ENST00000441350 COA5Q86WW8 74 aa10.2□□□□□ -0.78
VPS13B-204ENST00000441350 CHKB-CPT1BH3BT56 60 aa10.15□□□□□ -0.78
VPS13B-204ENST00000441350 M0R2T5 61 aa10.15□□□□□ -0.78
VPS13B-204ENST00000441350 SVIPQ8NHG7 77 aa10.15□□□□□ -0.78
VPS13B-204ENST00000441350 CSAG1Q6PB30 78 aa10.13□□□□□ -0.79
VPS13B-204ENST00000441350 SPTSSBQ8NFR3 76 aa10.05□□□□□ -0.8
VPS13B-204ENST00000441350 SERP1Q9Y6X1 66 aa10.04□□□□□ -0.8
VPS13B-204ENST00000441350 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
VPS13B-204ENST00000441350 KRTAP10-6P60371 365 aaPredicted RBP10□□□□□ -0.81
VPS13B-204ENST00000441350 LORP23490 312 aaPredicted RBP9.97□□□□□ -0.81
VPS13B-204ENST00000441350 KRTAP9-8Q9BYQ0 159 aa9.92□□□□□ -0.82
VPS13B-204ENST00000441350 H0YAA0 97 aa9.89□□□□□ -0.83
VPS13B-204ENST00000441350 RPS28P62857 69 aaKnown RBP9.88□□□□□ -0.83
VPS13B-204ENST00000441350 MT2AP02795 61 aa9.84□□□□□ -0.83
VPS13B-204ENST00000441350 ADM2Q7Z4H4 148 aa9.8□□□□□ -0.84
VPS13B-204ENST00000441350 MT1FP04733 61 aa9.77□□□□□ -0.85
VPS13B-204ENST00000441350 KRTAP10-10P60014 251 aa9.73□□□□□ -0.85
VPS13B-204ENST00000441350 SMIM26A0A096LP01 95 aa9.72□□□□□ -0.85
VPS13B-204ENST00000441350 P0C880 135 aa9.72□□□□□ -0.85
VPS13B-204ENST00000441350 LINC01558Q9Y6Z2 57 aa9.71□□□□□ -0.86
VPS13B-204ENST00000441350 SEC61GP60059 68 aa9.67□□□□□ -0.86
VPS13B-204ENST00000441350 A0A1B0GU69 56 aa9.64□□□□□ -0.87
VPS13B-204ENST00000441350 Q1T7F1 81 aa9.64□□□□□ -0.87
VPS13B-204ENST00000441350 V9GYY9 64 aa9.61□□□□□ -0.87
VPS13B-204ENST00000441350 CRIPTQ9P021 101 aa9.58□□□□□ -0.88
VPS13B-204ENST00000441350 KRTAP9-3Q9BYQ3 159 aa9.57□□□□□ -0.88
VPS13B-204ENST00000441350 PRR15LQ9BU68 103 aa9.56□□□□□ -0.88
VPS13B-204ENST00000441350 KRTAP19-1Q8IUB9 90 aa9.49□□□□□ -0.89
VPS13B-204ENST00000441350 SPRR2GQ9BYE4 73 aa9.49□□□□□ -0.89
VPS13B-204ENST00000441350 A0A1B0GU33 70 aa9.48□□□□□ -0.89
VPS13B-204ENST00000441350 R4GN34 69 aa9.47□□□□□ -0.89
VPS13B-204ENST00000441350 PSPHP1O15172 72 aa9.45□□□□□ -0.9
VPS13B-204ENST00000441350 M0QZ58 72 aa9.45□□□□□ -0.9
VPS13B-204ENST00000441350 KRTAP13-4Q3LI77 160 aa9.41□□□□□ -0.9
VPS13B-204ENST00000441350 Q5VV11 94 aa9.39□□□□□ -0.91
VPS13B-204ENST00000441350 LCE2BO14633 110 aa9.36□□□□□ -0.91
VPS13B-204ENST00000441350 SPATA8Q6RVD6 105 aa9.33□□□□□ -0.92
VPS13B-204ENST00000441350 KRTAP19-8Q3LI54 63 aa9.3□□□□□ -0.92
VPS13B-204ENST00000441350 UQCR11O14957 56 aa9.29□□□□□ -0.92
VPS13B-204ENST00000441350 LINC01554Q52M75 96 aa9.26□□□□□ -0.93
VPS13B-204ENST00000441350 MT1BP07438 61 aa9.19□□□□□ -0.94
VPS13B-204ENST00000441350 KRTAP9-2Q9BYQ4 174 aa9.19□□□□□ -0.94
VPS13B-204ENST00000441350 USH2AO75445 5202 aa9.17□□□□□ -0.94
VPS13B-204ENST00000441350 A0A0D9SG42 100 aa9.16□□□□□ -0.94
VPS13B-204ENST00000441350 A6NED7 52 aa9.16□□□□□ -0.94
VPS13B-204ENST00000441350 MIR22HGQ0VDD5 57 aa9.16□□□□□ -0.94
VPS13B-204ENST00000441350 A6NN06 94 aa9.15□□□□□ -0.94
VPS13B-204ENST00000441350 A8MU10 97 aa9.15□□□□□ -0.94
VPS13B-204ENST00000441350 PLAC4Q8WY50 150 aa9.05□□□□□ -0.96
VPS13B-204ENST00000441350 KRTAP12-1P59990 96 aa9.04□□□□□ -0.96
VPS13B-204ENST00000441350 KRTAP12-2P59991 146 aa8.98□□□□□ -0.97
VPS13B-204ENST00000441350 SPINT4Q6UDR6 99 aa8.98□□□□□ -0.97
VPS13B-204ENST00000441350 CDC42SE1Q9NRR8 79 aa8.97□□□□□ -0.97
VPS13B-204ENST00000441350 FSIP2Q5CZC0 6907 aa8.96□□□□□ -0.97
VPS13B-204ENST00000441350 SSPOA2VEC9 5147 aa8.92□□□□□ -0.98
VPS13B-204ENST00000441350 KRTAP19-6Q3LI70 58 aa8.87□□□□□ -0.99
VPS13B-204ENST00000441350 CAMK2N1Q7Z7J9 78 aa8.82□□□□□ -1
VPS13B-204ENST00000441350 MT1XP80297 61 aa8.81□□□□□ -1
VPS13B-204ENST00000441350 CRCT1Q9UGL9 99 aa8.81□□□□□ -1
VPS13B-204ENST00000441350 KRTAP10-5P60370 271 aa8.8□□□□□ -1
VPS13B-204ENST00000441350 K7ERS5 55 aa8.79□□□□□ -1
VPS13B-204ENST00000441350 BRK1Q8WUW1 75 aa8.79□□□□□ -1
VPS13B-204ENST00000441350 PRO2289Q9P1D8 64 aa8.73□□□□□ -1.01
VPS13B-204ENST00000441350 FCGBPQ9Y6R7 5405 aaPredicted RBP8.63□□□□□ -1.03
VPS13B-204ENST00000441350 KRTAP9-6A0A140TA67 174 aa8.6□□□□□ -1.03
VPS13B-204ENST00000441350 C10orf95Q9H7T3 257 aa8.58□□□□□ -1.04
VPS13B-204ENST00000441350 PRO0628Q9UI54 55 aa8.51□□□□□ -1.05
VPS13B-204ENST00000441350 KRTAP10-7P60409 375 aaPredicted RBP8.42□□□□□ -1.06
VPS13B-204ENST00000441350 ROMO1P60602 79 aa8.4□□□□□ -1.07
VPS13B-204ENST00000441350 KRTAP10-12P60413 245 aa8.36□□□□□ -1.07
VPS13B-204ENST00000441350 TNP1P09430 55 aa8.36□□□□□ -1.07
VPS13B-204ENST00000441350 PMAIP1Q13794 54 aa8.32□□□□□ -1.08
VPS13B-204ENST00000441350 KRTAP25-1Q3LHN0 102 aa8.29□□□□□ -1.08
VPS13B-204ENST00000441350 MACF1Q9UPN3 7388 aaKnown RBP8.19□□□□□ -1.1
VPS13B-204ENST00000441350 KRTAP4-8A0A0G2JLE6 195 aa8.18□□□□□ -1.1
VPS13B-204ENST00000441350 KRTAP4-8Q9BYQ9 185 aa8.18□□□□□ -1.1
VPS13B-204ENST00000441350 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.18□□□□□ -1.1
VPS13B-204ENST00000441350 KMT2DO14686 5537 aa8.15□□□□□ -1.1
VPS13B-204ENST00000441350 LCE3AQ5TA76 89 aa8.07□□□□□ -1.12
VPS13B-204ENST00000441350 KRTAP8-1Q8IUC2 63 aa8.04□□□□□ -1.12
VPS13B-204ENST00000441350 KRTAP23-1A1A580 65 aa8.03□□□□□ -1.12
VPS13B-204ENST00000441350 SYNE2Q8WXH0 6885 aaKnown RBP7.98□□□□□ -1.13
VPS13B-204ENST00000441350 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
VPS13B-204ENST00000441350 KRTAP6-3Q3LI67 103 aa7.9□□□□□ -1.14
VPS13B-204ENST00000441350 KRTAP5-9P26371 169 aa7.89□□□□□ -1.15
VPS13B-204ENST00000441350 KRTAP19-7Q3SYF9 63 aa7.87□□□□□ -1.15
VPS13B-204ENST00000441350 LOC100996750A0A140TA64 210 aa7.86□□□□□ -1.15
VPS13B-204ENST00000441350 KRTAP19-5Q3LI72 72 aa7.86□□□□□ -1.15
VPS13B-204ENST00000441350 KRTAP4-6Q9BYQ5 205 aa7.86□□□□□ -1.15
VPS13B-204ENST00000441350 KTN1-AS1Q86SY8 53 aa7.85□□□□□ -1.15
VPS13B-204ENST00000441350 KRTAP9-7A8MTY7 169 aa7.83□□□□□ -1.16
VPS13B-204ENST00000441350 PRAC1Q96KF2 57 aa7.82□□□□□ -1.16
VPS13B-204ENST00000441350 SPRR2FQ96RM1 72 aa7.81□□□□□ -1.16
VPS13B-204ENST00000441350 KRTAP12-3P60328 96 aa7.77□□□□□ -1.17
VPS13B-204ENST00000441350 MT1EP04732 61 aa7.74□□□□□ -1.17
VPS13B-204ENST00000441350 MUC12Q9UKN1 5478 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms