RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 MYCBP2O75592 4640 aa4.38□□□□□ -1.71
APP-209ENST00000440126 HSPG2P98160 4391 aa4.36□□□□□ -1.71
APP-209ENST00000440126 FAM229AH3BQW9 127 aa4.35□□□□□ -1.71
APP-209ENST00000440126 EPPK1P58107 5090 aaKnown RBP4.35□□□□□ -1.71
APP-209ENST00000440126 Q5VSD8 79 aa4.34□□□□□ -1.71
APP-209ENST00000440126 Q8N1X5 172 aa4.33□□□□□ -1.72
APP-209ENST00000440126 RYR1P21817 5038 aa4.32□□□□□ -1.72
APP-209ENST00000440126 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
APP-209ENST00000440126 TNXBP22105 4242 aa4.27□□□□□ -1.73
APP-209ENST00000440126 H0YAA0 97 aa4.23□□□□□ -1.73
APP-209ENST00000440126 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
APP-209ENST00000440126 RPS29P62273 56 aaKnown RBP4.23□□□□□ -1.73
APP-209ENST00000440126 KRTAP10-8P60410 259 aa4.22□□□□□ -1.73
APP-209ENST00000440126 KRTAP4-5Q9BYR2 181 aa4.22□□□□□ -1.73
APP-209ENST00000440126 J3QL48 77 aa4.21□□□□□ -1.74
APP-209ENST00000440126 K7ERS5 55 aa4.2□□□□□ -1.74
APP-209ENST00000440126 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
APP-209ENST00000440126 C10orf95Q9H7T3 257 aa4.19□□□□□ -1.74
APP-209ENST00000440126 ABCA13Q86UQ4 5058 aa4.19□□□□□ -1.74
APP-209ENST00000440126 LPAP08519 4548 aa4.18□□□□□ -1.74
APP-209ENST00000440126 KRTAP3-1Q9BYR8 98 aa4.17□□□□□ -1.74
APP-209ENST00000440126 LRP2P98164 4655 aa4.17□□□□□ -1.74
APP-209ENST00000440126 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
APP-209ENST00000440126 TPRXLQ17RH7 258 aa4.15□□□□□ -1.75
APP-209ENST00000440126 XP32Q5T750 250 aa4.13□□□□□ -1.75
APP-209ENST00000440126 A0A1B0GU33 70 aa4.11□□□□□ -1.75
APP-209ENST00000440126 RPL37P61927 97 aaKnown RBP4.09□□□□□ -1.75
APP-209ENST00000440126 H1FX-AS1Q4G0G2 97 aa4.08□□□□□ -1.76
APP-209ENST00000440126 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
APP-209ENST00000440126 HERC2O95714 4834 aa4.06□□□□□ -1.76
APP-209ENST00000440126 KRTAP3-3Q9BYR6 98 aa3.99□□□□□ -1.77
APP-209ENST00000440126 A0A0D9SG42 100 aa3.98□□□□□ -1.77
APP-209ENST00000440126 MUC2Q02817 5179 aa3.97□□□□□ -1.77
APP-209ENST00000440126 S4R3F8 94 aa3.96□□□□□ -1.78
APP-209ENST00000440126 HERC1Q15751 4861 aa3.94□□□□□ -1.78
APP-209ENST00000440126 BIRC6Q9NR09 4857 aa3.94□□□□□ -1.78
APP-209ENST00000440126 PCLOQ9Y6V0 5065 aa3.93□□□□□ -1.78
APP-209ENST00000440126 KRTAP4-1Q9BYQ7 146 aa3.92□□□□□ -1.78
APP-209ENST00000440126 KRTAP13-4Q3LI77 160 aa3.91□□□□□ -1.78
APP-209ENST00000440126 KRTAP10-6P60371 365 aaPredicted RBP3.9□□□□□ -1.79
APP-209ENST00000440126 KRTAP3-2Q9BYR7 98 aa3.89□□□□□ -1.79
APP-209ENST00000440126 MUC17Q685J3 4493 aa3.87□□□□□ -1.79
APP-209ENST00000440126 FAT4Q6V0I7 4981 aa3.8□□□□□ -1.8
APP-209ENST00000440126 RNF213Q63HN8 5207 aa3.79□□□□□ -1.8
APP-209ENST00000440126 CAMK2N1Q7Z7J9 78 aa3.78□□□□□ -1.8
APP-209ENST00000440126 PLAC4Q8WY50 150 aa3.77□□□□□ -1.81
APP-209ENST00000440126 HMCN2Q8NDA2 5059 aa3.77□□□□□ -1.81
APP-209ENST00000440126 LORP23490 312 aaPredicted RBP3.77□□□□□ -1.81
APP-209ENST00000440126 KRTAP12-2P59991 146 aa3.76□□□□□ -1.81
APP-209ENST00000440126 UBR4Q5T4S7 5183 aa3.74□□□□□ -1.81
APP-209ENST00000440126 M0QZ58 72 aa3.73□□□□□ -1.81
APP-209ENST00000440126 KRTAP19-2Q3LHN2 52 aa3.72□□□□□ -1.81
APP-209ENST00000440126 KRTAP12-1P59990 96 aa3.69□□□□□ -1.82
APP-209ENST00000440126 R4GN34 69 aa3.69□□□□□ -1.82
APP-209ENST00000440126 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
APP-209ENST00000440126 FLGP20930 4061 aaPredicted RBP3.63□□□□□ -1.83
APP-209ENST00000440126 M0R2T5 61 aa3.58□□□□□ -1.84
APP-209ENST00000440126 LCE2CQ5TA81 110 aa3.58□□□□□ -1.84
APP-209ENST00000440126 MT1HP80294 61 aa3.51□□□□□ -1.85
APP-209ENST00000440126 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
APP-209ENST00000440126 INE1O15225 51 aa3.45□□□□□ -1.86
APP-209ENST00000440126 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
APP-209ENST00000440126 MT1FP04733 61 aa3.44□□□□□ -1.86
APP-209ENST00000440126 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
APP-209ENST00000440126 MT2AP02795 61 aa3.42□□□□□ -1.86
APP-209ENST00000440126 KRTAP19-1Q8IUB9 90 aa3.42□□□□□ -1.86
APP-209ENST00000440126 KRTAP9-8Q9BYQ0 159 aa3.39□□□□□ -1.87
APP-209ENST00000440126 SPRR2GQ9BYE4 73 aa3.35□□□□□ -1.87
APP-209ENST00000440126 USH2AO75445 5202 aa3.35□□□□□ -1.87
APP-209ENST00000440126 LCE2DQ5TA82 110 aaPredicted RBP3.3□□□□□ -1.88
APP-209ENST00000440126 TNP1P09430 55 aa3.29□□□□□ -1.88
APP-209ENST00000440126 MT1BP07438 61 aa3.26□□□□□ -1.89
APP-209ENST00000440126 KRTAP23-1A1A580 65 aa3.26□□□□□ -1.89
APP-209ENST00000440126 FSIP2Q5CZC0 6907 aa3.25□□□□□ -1.89
APP-209ENST00000440126 KRTAP9-3Q9BYQ3 159 aa3.25□□□□□ -1.89
APP-209ENST00000440126 LCE3AQ5TA76 89 aa3.21□□□□□ -1.9
APP-209ENST00000440126 KRTAP19-8Q3LI54 63 aa3.21□□□□□ -1.9
APP-209ENST00000440126 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
APP-209ENST00000440126 MT1XP80297 61 aa3.2□□□□□ -1.9
APP-209ENST00000440126 KMT2DO14686 5537 aa3.2□□□□□ -1.9
APP-209ENST00000440126 LCE2BO14633 110 aa3.2□□□□□ -1.9
APP-209ENST00000440126 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
APP-209ENST00000440126 LCE2AQ5TA79 106 aaPredicted RBP3.16□□□□□ -1.9
APP-209ENST00000440126 KRTAP10-12P60413 245 aa3.09□□□□□ -1.91
APP-209ENST00000440126 KRTAP4-8A0A0G2JLE6 195 aa3.06□□□□□ -1.92
APP-209ENST00000440126 KRTAP4-8Q9BYQ9 185 aa3.06□□□□□ -1.92
APP-209ENST00000440126 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
APP-209ENST00000440126 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
APP-209ENST00000440126 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
APP-209ENST00000440126 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
APP-209ENST00000440126 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.95
APP-209ENST00000440126 FCGBPQ9Y6R7 5405 aaPredicted RBP2.88□□□□□ -1.95
APP-209ENST00000440126 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
APP-209ENST00000440126 KRTAP19-7Q3SYF9 63 aa2.86□□□□□ -1.95
APP-209ENST00000440126 LCE3CQ5T5A8 94 aa2.81□□□□□ -1.96
APP-209ENST00000440126 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
APP-209ENST00000440126 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
APP-209ENST00000440126 DSTQ03001 7570 aaKnown RBP2.78□□□□□ -1.97
APP-209ENST00000440126 MT1EP04732 61 aa2.77□□□□□ -1.97
APP-209ENST00000440126 KRTAP4-3Q9BYR4 195 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms