RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 NF1P21359 2839 aa2.46□□□□□ -2.02
CAST-209ENST00000437034 FBN3Q75N90 2809 aa2.46□□□□□ -2.02
CAST-209ENST00000437034 KRTAP9-7A8MTY7 169 aa2.46□□□□□ -2.02
CAST-209ENST00000437034 ZANQ9Y493 2812 aa2.46□□□□□ -2.02
CAST-209ENST00000437034 LRRK2Q5S007 2527 aa2.46□□□□□ -2.02
CAST-209ENST00000437034 DNHD1Q96M86 4753 aa2.45□□□□□ -2.02
CAST-209ENST00000437034 KRTAP13-4Q3LI77 160 aa2.45□□□□□ -2.02
CAST-209ENST00000437034 FAT1Q14517 4588 aa2.45□□□□□ -2.02
CAST-209ENST00000437034 POLQO75417 2590 aa2.45□□□□□ -2.02
CAST-209ENST00000437034 RYR2Q92736 4967 aa2.44□□□□□ -2.02
CAST-209ENST00000437034 KRTAP10-2P60368 255 aa2.44□□□□□ -2.02
CAST-209ENST00000437034 ZFYVE26Q68DK2 2539 aa2.43□□□□□ -2.02
CAST-209ENST00000437034 HIVEP1P15822 2718 aa2.43□□□□□ -2.02
CAST-209ENST00000437034 LINC01556Q5JQF7 62 aa2.43□□□□□ -2.02
CAST-209ENST00000437034 HELZ2Q9BYK8 2649 aaKnown RBP2.42□□□□□ -2.02
CAST-209ENST00000437034 NCOR2Q9Y618 2525 aa2.42□□□□□ -2.02
CAST-209ENST00000437034 ITPR2Q14571 2701 aa2.42□□□□□ -2.02
CAST-209ENST00000437034 COL7A1Q02388 2944 aa2.41□□□□□ -2.02
CAST-209ENST00000437034 SETXQ7Z333 2677 aaKnown RBP2.41□□□□□ -2.02
CAST-209ENST00000437034 HYDINQ4G0P3 5121 aa2.41□□□□□ -2.02
CAST-209ENST00000437034 MAST4O15021 2626 aa2.41□□□□□ -2.02
CAST-209ENST00000437034 LRP1BQ9NZR2 4599 aa2.4□□□□□ -2.02
CAST-209ENST00000437034 SPRR5A0A1B0GTR4 108 aa2.4□□□□□ -2.03
CAST-209ENST00000437034 SPART-AS1P0CW21 52 aa2.4□□□□□ -2.03
CAST-209ENST00000437034 KRTAP12-1P59990 96 aa2.4□□□□□ -2.03
CAST-209ENST00000437034 TENM1Q9UKZ4 2725 aa2.38□□□□□ -2.03
CAST-209ENST00000437034 FLNAP21333 2647 aaKnown RBP2.38□□□□□ -2.03
CAST-209ENST00000437034 ACACBO00763 2458 aa2.38□□□□□ -2.03
CAST-209ENST00000437034 A0A1B0GVY2 172 aa2.38□□□□□ -2.03
CAST-209ENST00000437034 ACANP16112 2415 aa2.37□□□□□ -2.03
CAST-209ENST00000437034 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
CAST-209ENST00000437034 CENPEQ02224 2701 aa2.36□□□□□ -2.03
CAST-209ENST00000437034 MUC17Q685J3 4493 aa2.36□□□□□ -2.03
CAST-209ENST00000437034 KRTAP10-6P60371 365 aaPredicted RBP2.35□□□□□ -2.03
CAST-209ENST00000437034 LCE4AQ5TA78 99 aa2.35□□□□□ -2.03
CAST-209ENST00000437034 KRTAP13-1Q8IUC0 172 aa2.34□□□□□ -2.03
CAST-209ENST00000437034 KRTAP9-8Q9BYQ0 159 aa2.34□□□□□ -2.04
CAST-209ENST00000437034 KRTAP10-1P60331 282 aa2.33□□□□□ -2.04
CAST-209ENST00000437034 Q5VSD8 79 aa2.33□□□□□ -2.04
CAST-209ENST00000437034 MEGF8Q7Z7M0 2845 aa2.33□□□□□ -2.04
CAST-209ENST00000437034 KRTAP1-4P0C5Y4 121 aa2.32□□□□□ -2.04
CAST-209ENST00000437034 KRTAP10-4P60372 401 aaPredicted RBP2.32□□□□□ -2.04
CAST-209ENST00000437034 KRTAP2-2Q9BYT5 123 aa2.32□□□□□ -2.04
CAST-209ENST00000437034 MTORP42345 2549 aa2.31□□□□□ -2.04
CAST-209ENST00000437034 DEFB135Q30KP9 77 aa2.31□□□□□ -2.04
CAST-209ENST00000437034 NOTCH2Q04721 2471 aa2.31□□□□□ -2.04
CAST-209ENST00000437034 NIPBLQ6KC79 2804 aaeCLIP2.31□□□□□ -2.046e-9■■■■□ 19.5
CAST-209ENST00000437034 NBEAL2Q6ZNJ1 2754 aa2.31□□□□□ -2.04
CAST-209ENST00000437034 RYR3Q15413 4870 aa2.3□□□□□ -2.04
CAST-209ENST00000437034 HTN3P15516 51 aa2.3□□□□□ -2.04
CAST-209ENST00000437034 KRTAP5-3Q6L8H2 238 aa2.3□□□□□ -2.04
CAST-209ENST00000437034 KRTAP1-5Q9BYS1 174 aa2.3□□□□□ -2.04
CAST-209ENST00000437034 PKD1L1Q8TDX9 2849 aa2.29□□□□□ -2.04
CAST-209ENST00000437034 RPS29P62273 56 aaKnown RBP2.26□□□□□ -2.05
CAST-209ENST00000437034 TLN2Q9Y4G6 2542 aa2.25□□□□□ -2.05
CAST-209ENST00000437034 RYR1P21817 5038 aa2.25□□□□□ -2.05
CAST-209ENST00000437034 FASNP49327 2511 aaKnown RBP2.25□□□□□ -2.05
CAST-209ENST00000437034 MYO9AB2RTY4 2548 aa2.24□□□□□ -2.05
CAST-209ENST00000437034 M0QZ58 72 aa2.23□□□□□ -2.05
CAST-209ENST00000437034 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
CAST-209ENST00000437034 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
CAST-209ENST00000437034 TENM3Q9P273 2699 aa2.21□□□□□ -2.06
CAST-209ENST00000437034 NBEAL1Q6ZS30 2694 aa2.21□□□□□ -2.06
CAST-209ENST00000437034 FLNBO75369 2602 aaKnown RBP2.21□□□□□ -2.06
CAST-209ENST00000437034 KMT2CQ8NEZ4 4911 aaKnown RBP2.21□□□□□ -2.06
CAST-209ENST00000437034 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
CAST-209ENST00000437034 TGP01266 2768 aa2.2□□□□□ -2.06
CAST-209ENST00000437034 DEFB4AO15263 64 aa2.2□□□□□ -2.06
CAST-209ENST00000437034 HERC2O95714 4834 aa2.2□□□□□ -2.06
CAST-209ENST00000437034 STAB1Q9NY15 2570 aa2.19□□□□□ -2.06
CAST-209ENST00000437034 BIRC6Q9NR09 4857 aa2.18□□□□□ -2.06
CAST-209ENST00000437034 FLGP20930 4061 aaPredicted RBP2.17□□□□□ -2.06
CAST-209ENST00000437034 KRTAP10-10P60014 251 aa2.17□□□□□ -2.06
CAST-209ENST00000437034 LCE1AQ5T7P2 110 aa2.16□□□□□ -2.06
CAST-209ENST00000437034 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
CAST-209ENST00000437034 MYCBP2O75592 4640 aa2.14□□□□□ -2.07
CAST-209ENST00000437034 LRP1Q07954 4544 aaKnown RBP2.14□□□□□ -2.07
CAST-209ENST00000437034 LCE3CQ5T5A8 94 aa2.13□□□□□ -2.07
CAST-209ENST00000437034 STAB2Q8WWQ8 2551 aa2.12□□□□□ -2.07
CAST-209ENST00000437034 ABCA13Q86UQ4 5058 aa2.11□□□□□ -2.07
CAST-209ENST00000437034 EPPK1P58107 5090 aaKnown RBP2.1□□□□□ -2.07
CAST-209ENST00000437034 C9orf92A6NGG3 77 aa2.08□□□□□ -2.08
CAST-209ENST00000437034 MT1HL1P0DM35 61 aa2.08□□□□□ -2.08
CAST-209ENST00000437034 NOTCH1P46531 2555 aa2.07□□□□□ -2.08
CAST-209ENST00000437034 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
CAST-209ENST00000437034 TNP1P09430 55 aa2.06□□□□□ -2.08
CAST-209ENST00000437034 PCLOQ9Y6V0 5065 aa2.05□□□□□ -2.08
CAST-209ENST00000437034 HERC1Q15751 4861 aa2.05□□□□□ -2.08
CAST-209ENST00000437034 KRTAP19-2Q3LHN2 52 aa2.03□□□□□ -2.08
CAST-209ENST00000437034 KIAA1109Q2LD37 5005 aa2.01□□□□□ -2.09
CAST-209ENST00000437034 LRP2P98164 4655 aa2.01□□□□□ -2.09
CAST-209ENST00000437034 MT3P25713 68 aa2.01□□□□□ -2.09
CAST-209ENST00000437034 MGAM2Q2M2H8 2515 aa2□□□□□ -2.09
CAST-209ENST00000437034 KRTAP12-4P60329 112 aa2□□□□□ -2.09
CAST-209ENST00000437034 LCE3EQ5T5B0 92 aa1.98□□□□□ -2.09
CAST-209ENST00000437034 HMCN2Q8NDA2 5059 aa1.96□□□□□ -2.09
CAST-209ENST00000437034 KRTAP10-5P60370 271 aa1.92□□□□□ -2.1
CAST-209ENST00000437034 KRTAP10-7P60409 375 aaPredicted RBP1.91□□□□□ -2.1
CAST-209ENST00000437034 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
CAST-209ENST00000437034 M0R2T5 61 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms