RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
SCAF4-203ENST00000434667 MYCBP2O75592 4640 aa5.65□□□□□ -1.51
SCAF4-203ENST00000434667 RPL37P61927 97 aaKnown RBP5.62□□□□□ -1.51
SCAF4-203ENST00000434667 COX6B2Q6YFQ2 88 aa5.61□□□□□ -1.51
SCAF4-203ENST00000434667 KMT2CQ8NEZ4 4911 aaKnown RBP5.58□□□□□ -1.52
SCAF4-203ENST00000434667 LRP1Q07954 4544 aaKnown RBP5.56□□□□□ -1.52
SCAF4-203ENST00000434667 RYR3Q15413 4870 aa5.55□□□□□ -1.52
SCAF4-203ENST00000434667 KRTAP10-4P60372 401 aaPredicted RBP5.53□□□□□ -1.52
SCAF4-203ENST00000434667 KRTAP13-4Q3LI77 160 aa5.51□□□□□ -1.53
SCAF4-203ENST00000434667 P0C880 135 aa5.5□□□□□ -1.53
SCAF4-203ENST00000434667 S4R3F8 94 aa5.48□□□□□ -1.53
SCAF4-203ENST00000434667 C20orf166-AS1Q96NR2 134 aa5.45□□□□□ -1.54
SCAF4-203ENST00000434667 LPAP08519 4548 aa5.45□□□□□ -1.54
SCAF4-203ENST00000434667 TPRXLQ17RH7 258 aa5.43□□□□□ -1.54
SCAF4-203ENST00000434667 KRTAP10-8P60410 259 aa5.42□□□□□ -1.54
SCAF4-203ENST00000434667 KRTAP10-6P60371 365 aaPredicted RBP5.41□□□□□ -1.54
SCAF4-203ENST00000434667 A0A1B0GVY2 172 aa5.39□□□□□ -1.55
SCAF4-203ENST00000434667 M0QZ58 72 aa5.39□□□□□ -1.55
SCAF4-203ENST00000434667 RPS29P62273 56 aaKnown RBP5.39□□□□□ -1.55
SCAF4-203ENST00000434667 KRTAP3-3Q9BYR6 98 aa5.39□□□□□ -1.55
SCAF4-203ENST00000434667 R4GN34 69 aa5.39□□□□□ -1.55
SCAF4-203ENST00000434667 LUZP6Q538Z0 58 aa5.38□□□□□ -1.55
SCAF4-203ENST00000434667 RYR1P21817 5038 aa5.38□□□□□ -1.55
SCAF4-203ENST00000434667 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
SCAF4-203ENST00000434667 KRTAP3-2Q9BYR7 98 aa5.34□□□□□ -1.55
SCAF4-203ENST00000434667 KRTAP12-2P59991 146 aa5.32□□□□□ -1.56
SCAF4-203ENST00000434667 EPPK1P58107 5090 aaKnown RBP5.29□□□□□ -1.56
SCAF4-203ENST00000434667 LRP2P98164 4655 aa5.29□□□□□ -1.56
SCAF4-203ENST00000434667 A0A0A0MQY5 61 aa5.25□□□□□ -1.57
SCAF4-203ENST00000434667 KRTAP17-1Q9BYP8 105 aa5.24□□□□□ -1.57
SCAF4-203ENST00000434667 Q5VSD8 79 aa5.23□□□□□ -1.57
SCAF4-203ENST00000434667 MUC17Q685J3 4493 aa5.21□□□□□ -1.58
SCAF4-203ENST00000434667 BIRC6Q9NR09 4857 aa5.2□□□□□ -1.58
SCAF4-203ENST00000434667 XP32Q5T750 250 aa5.2□□□□□ -1.58
SCAF4-203ENST00000434667 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
SCAF4-203ENST00000434667 KIAA1109Q2LD37 5005 aa5.17□□□□□ -1.58
SCAF4-203ENST00000434667 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
SCAF4-203ENST00000434667 ABCA13Q86UQ4 5058 aa5.16□□□□□ -1.58
SCAF4-203ENST00000434667 PLAC4Q8WY50 150 aa5.14□□□□□ -1.59
SCAF4-203ENST00000434667 HERC2O95714 4834 aa5.14□□□□□ -1.59
SCAF4-203ENST00000434667 J3QL48 77 aa5.12□□□□□ -1.59
SCAF4-203ENST00000434667 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
SCAF4-203ENST00000434667 LORP23490 312 aaPredicted RBP5.03□□□□□ -1.6
SCAF4-203ENST00000434667 MUC2Q02817 5179 aa5.03□□□□□ -1.6
SCAF4-203ENST00000434667 M0R2T5 61 aa5□□□□□ -1.61
SCAF4-203ENST00000434667 MT1HL1P0DM35 61 aa4.98□□□□□ -1.61
SCAF4-203ENST00000434667 PCLOQ9Y6V0 5065 aa4.92□□□□□ -1.62
SCAF4-203ENST00000434667 KRTAP19-2Q3LHN2 52 aa4.89□□□□□ -1.63
SCAF4-203ENST00000434667 SEC61BP60468 96 aaKnown RBP4.88□□□□□ -1.63
SCAF4-203ENST00000434667 KRTAP4-5Q9BYR2 181 aa4.83□□□□□ -1.64
SCAF4-203ENST00000434667 TNP1P09430 55 aa4.83□□□□□ -1.64
SCAF4-203ENST00000434667 KRTAP4-1Q9BYQ7 146 aa4.82□□□□□ -1.64
SCAF4-203ENST00000434667 HERC1Q15751 4861 aa4.77□□□□□ -1.65
SCAF4-203ENST00000434667 FAT4Q6V0I7 4981 aa4.74□□□□□ -1.65
SCAF4-203ENST00000434667 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
SCAF4-203ENST00000434667 PP632Q6XCG6 107 aa4.68□□□□□ -1.66
SCAF4-203ENST00000434667 RNF213Q63HN8 5207 aa4.56□□□□□ -1.68
SCAF4-203ENST00000434667 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
SCAF4-203ENST00000434667 LCE2CQ5TA81 110 aa4.44□□□□□ -1.7
SCAF4-203ENST00000434667 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
SCAF4-203ENST00000434667 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
SCAF4-203ENST00000434667 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
SCAF4-203ENST00000434667 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
SCAF4-203ENST00000434667 KRTAP19-1Q8IUB9 90 aa4.31□□□□□ -1.72
SCAF4-203ENST00000434667 KMT2DO14686 5537 aa4.25□□□□□ -1.73
SCAF4-203ENST00000434667 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
SCAF4-203ENST00000434667 PRO2289Q9P1D8 64 aa4.22□□□□□ -1.73
SCAF4-203ENST00000434667 USH2AO75445 5202 aa4.22□□□□□ -1.73
SCAF4-203ENST00000434667 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
SCAF4-203ENST00000434667 MT1FP04733 61 aa4.2□□□□□ -1.74
SCAF4-203ENST00000434667 KRTAP12-3P60328 96 aa4.17□□□□□ -1.74
SCAF4-203ENST00000434667 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
SCAF4-203ENST00000434667 KRTAP9-8Q9BYQ0 159 aa4.15□□□□□ -1.75
SCAF4-203ENST00000434667 MT2AP02795 61 aa4.14□□□□□ -1.75
SCAF4-203ENST00000434667 MT1HP80294 61 aa4.14□□□□□ -1.75
SCAF4-203ENST00000434667 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
SCAF4-203ENST00000434667 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
SCAF4-203ENST00000434667 CRCT1Q9UGL9 99 aa4.12□□□□□ -1.75
SCAF4-203ENST00000434667 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
SCAF4-203ENST00000434667 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.75
SCAF4-203ENST00000434667 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
SCAF4-203ENST00000434667 MT1XP80297 61 aa4.07□□□□□ -1.76
SCAF4-203ENST00000434667 INE1O15225 51 aa4.07□□□□□ -1.76
SCAF4-203ENST00000434667 LCE2AQ5TA79 106 aaPredicted RBP4.06□□□□□ -1.76
SCAF4-203ENST00000434667 KRTAP8-1Q8IUC2 63 aa4.05□□□□□ -1.76
SCAF4-203ENST00000434667 MT1BP07438 61 aa4.04□□□□□ -1.76
SCAF4-203ENST00000434667 KRTAP9-3Q9BYQ3 159 aa3.97□□□□□ -1.77
SCAF4-203ENST00000434667 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
SCAF4-203ENST00000434667 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
SCAF4-203ENST00000434667 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.78
SCAF4-203ENST00000434667 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.78
SCAF4-203ENST00000434667 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
SCAF4-203ENST00000434667 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
SCAF4-203ENST00000434667 FCGBPQ9Y6R7 5405 aaPredicted RBP3.85□□□□□ -1.79
SCAF4-203ENST00000434667 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
SCAF4-203ENST00000434667 LCE2DQ5TA82 110 aaPredicted RBP3.79□□□□□ -1.8
SCAF4-203ENST00000434667 LCE2BO14633 110 aa3.78□□□□□ -1.8
SCAF4-203ENST00000434667 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
SCAF4-203ENST00000434667 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
SCAF4-203ENST00000434667 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms