RNA–Protein interactions for RNA: ENST00000434054.6

CLCN2-204, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCN2, Length 2,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-204ENST00000434054 H3BS24 57 aa9.16□□□□□ -0.94
CLCN2-204ENST00000434054 LRP1Q07954 4544 aaKnown RBP9.16□□□□□ -0.94
CLCN2-204ENST00000434054 KRTAP25-1Q3LHN0 102 aa9.14□□□□□ -0.95
CLCN2-204ENST00000434054 COX6B2Q6YFQ2 88 aa9.11□□□□□ -0.95
CLCN2-204ENST00000434054 RPS29P62273 56 aaKnown RBP9.1□□□□□ -0.95
CLCN2-204ENST00000434054 MYCBP2O75592 4640 aa9.08□□□□□ -0.96
CLCN2-204ENST00000434054 PKHD1L1Q86WI1 4243 aa9.04□□□□□ -0.96
CLCN2-204ENST00000434054 A0A0D9SG42 100 aa9.02□□□□□ -0.96
CLCN2-204ENST00000434054 K7ERS5 55 aa8.98□□□□□ -0.97
CLCN2-204ENST00000434054 ROMO1P60602 79 aa8.98□□□□□ -0.97
CLCN2-204ENST00000434054 KRTAP4-5Q9BYR2 181 aa8.97□□□□□ -0.97
CLCN2-204ENST00000434054 KRTAP13-4Q3LI77 160 aa8.96□□□□□ -0.98
CLCN2-204ENST00000434054 KRTAP10-6P60371 365 aaPredicted RBP8.91□□□□□ -0.98
CLCN2-204ENST00000434054 KRTAP3-3Q9BYR6 98 aa8.9□□□□□ -0.98
CLCN2-204ENST00000434054 FAT3Q8TDW7 4589 aa8.88□□□□□ -0.99
CLCN2-204ENST00000434054 KRTAP10-8P60410 259 aa8.87□□□□□ -0.99
CLCN2-204ENST00000434054 TNXBP22105 4242 aa8.87□□□□□ -0.99
CLCN2-204ENST00000434054 RPL37P61927 97 aaKnown RBP8.85□□□□□ -0.99
CLCN2-204ENST00000434054 ABCA13Q86UQ4 5058 aa8.84□□□□□ -0.99
CLCN2-204ENST00000434054 C10orf95Q9H7T3 257 aa8.83□□□□□ -1
CLCN2-204ENST00000434054 KRTAP3-2Q9BYR7 98 aa8.81□□□□□ -1
CLCN2-204ENST00000434054 P0C880 135 aa8.81□□□□□ -1
CLCN2-204ENST00000434054 BIRC6Q9NR09 4857 aa8.79□□□□□ -1
CLCN2-204ENST00000434054 LPAP08519 4548 aa8.79□□□□□ -1
CLCN2-204ENST00000434054 MT1HL1P0DM35 61 aa8.79□□□□□ -1
CLCN2-204ENST00000434054 TPRXLQ17RH7 258 aa8.79□□□□□ -1
CLCN2-204ENST00000434054 HERC2O95714 4834 aa8.75□□□□□ -1.01
CLCN2-204ENST00000434054 S4R3F8 94 aa8.75□□□□□ -1.01
CLCN2-204ENST00000434054 SPINT4Q6UDR6 99 aa8.71□□□□□ -1.02
CLCN2-204ENST00000434054 XP32Q5T750 250 aa8.69□□□□□ -1.02
CLCN2-204ENST00000434054 KRTAP12-2P59991 146 aa8.67□□□□□ -1.02
CLCN2-204ENST00000434054 J3QL48 77 aa8.66□□□□□ -1.02
CLCN2-204ENST00000434054 LRP2P98164 4655 aa8.62□□□□□ -1.03
CLCN2-204ENST00000434054 PCLOQ9Y6V0 5065 aa8.55□□□□□ -1.04
CLCN2-204ENST00000434054 KRTAP12-1P59990 96 aa8.52□□□□□ -1.05
CLCN2-204ENST00000434054 NDUFAF8A1L188 74 aa8.45□□□□□ -1.06
CLCN2-204ENST00000434054 HERC1Q15751 4861 aa8.43□□□□□ -1.06
CLCN2-204ENST00000434054 KRTAP15-1Q3LI76 137 aa8.4□□□□□ -1.07
CLCN2-204ENST00000434054 M0QZ58 72 aa8.28□□□□□ -1.08
CLCN2-204ENST00000434054 R4GN34 69 aa8.21□□□□□ -1.1
CLCN2-204ENST00000434054 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
CLCN2-204ENST00000434054 MUC2Q02817 5179 aa8.17□□□□□ -1.1
CLCN2-204ENST00000434054 HMCN2Q8NDA2 5059 aa8.14□□□□□ -1.11
CLCN2-204ENST00000434054 SEC61BP60468 96 aaKnown RBP8.11□□□□□ -1.11
CLCN2-204ENST00000434054 KRTAP4-1Q9BYQ7 146 aa8.07□□□□□ -1.12
CLCN2-204ENST00000434054 UBR4Q5T4S7 5183 aa8□□□□□ -1.13
CLCN2-204ENST00000434054 MUC17Q685J3 4493 aa7.99□□□□□ -1.13
CLCN2-204ENST00000434054 RNF213Q63HN8 5207 aa7.98□□□□□ -1.13
CLCN2-204ENST00000434054 PLAC4Q8WY50 150 aa7.96□□□□□ -1.14
CLCN2-204ENST00000434054 A0A0A0MQY5 61 aa7.94□□□□□ -1.14
CLCN2-204ENST00000434054 CAMK2N1Q7Z7J9 78 aa7.85□□□□□ -1.15
CLCN2-204ENST00000434054 FAT4Q6V0I7 4981 aa7.81□□□□□ -1.16
CLCN2-204ENST00000434054 KRTAP19-2Q3LHN2 52 aa7.69□□□□□ -1.18
CLCN2-204ENST00000434054 LUZP6Q538Z0 58 aa7.63□□□□□ -1.19
CLCN2-204ENST00000434054 PP632Q6XCG6 107 aa7.59□□□□□ -1.19
CLCN2-204ENST00000434054 M0R2T5 61 aa7.56□□□□□ -1.2
CLCN2-204ENST00000434054 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
CLCN2-204ENST00000434054 LCE2CQ5TA81 110 aa7.53□□□□□ -1.2
CLCN2-204ENST00000434054 TNP1P09430 55 aa7.48□□□□□ -1.21
CLCN2-204ENST00000434054 MT1HP80294 61 aa7.41□□□□□ -1.22
CLCN2-204ENST00000434054 SPRR5A0A1B0GTR4 108 aa7.21□□□□□ -1.26
CLCN2-204ENST00000434054 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
CLCN2-204ENST00000434054 KRTAP19-1Q8IUB9 90 aa7.18□□□□□ -1.26
CLCN2-204ENST00000434054 LCE3AQ5TA76 89 aa7.15□□□□□ -1.26
CLCN2-204ENST00000434054 KRTAP23-1A1A580 65 aa7.15□□□□□ -1.27
CLCN2-204ENST00000434054 MT1FP04733 61 aa7.15□□□□□ -1.27
CLCN2-204ENST00000434054 MT2AP02795 61 aa7.14□□□□□ -1.27
CLCN2-204ENST00000434054 KRTAP9-8Q9BYQ0 159 aa7.12□□□□□ -1.27
CLCN2-204ENST00000434054 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
CLCN2-204ENST00000434054 LCE2AQ5TA79 106 aaPredicted RBP6.97□□□□□ -1.29
CLCN2-204ENST00000434054 USH2AO75445 5202 aa6.87□□□□□ -1.31
CLCN2-204ENST00000434054 KRTAP9-3Q9BYQ3 159 aa6.84□□□□□ -1.31
CLCN2-204ENST00000434054 FSIP2Q5CZC0 6907 aa6.83□□□□□ -1.32
CLCN2-204ENST00000434054 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
CLCN2-204ENST00000434054 KRTAP10-5P60370 271 aa6.79□□□□□ -1.32
CLCN2-204ENST00000434054 MT1XP80297 61 aa6.78□□□□□ -1.32
CLCN2-204ENST00000434054 MT1BP07438 61 aa6.75□□□□□ -1.33
CLCN2-204ENST00000434054 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
CLCN2-204ENST00000434054 LCE2BO14633 110 aa6.72□□□□□ -1.33
CLCN2-204ENST00000434054 KRTAP10-12P60413 245 aa6.71□□□□□ -1.33
CLCN2-204ENST00000434054 KRTAP10-7P60409 375 aaPredicted RBP6.71□□□□□ -1.34
CLCN2-204ENST00000434054 KMT2DO14686 5537 aa6.71□□□□□ -1.34
CLCN2-204ENST00000434054 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
CLCN2-204ENST00000434054 PRO2289Q9P1D8 64 aa6.62□□□□□ -1.35
CLCN2-204ENST00000434054 INE1O15225 51 aa6.48□□□□□ -1.37
CLCN2-204ENST00000434054 SSPOA2VEC9 5147 aa6.47□□□□□ -1.37
CLCN2-204ENST00000434054 KRTAP19-5Q3LI72 72 aa6.43□□□□□ -1.38
CLCN2-204ENST00000434054 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
CLCN2-204ENST00000434054 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
CLCN2-204ENST00000434054 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
CLCN2-204ENST00000434054 KRTAP9-6A8MVA2 160 aa6.27□□□□□ -1.41
CLCN2-204ENST00000434054 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
CLCN2-204ENST00000434054 LCE2DQ5TA82 110 aaPredicted RBP6.19□□□□□ -1.42
CLCN2-204ENST00000434054 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
CLCN2-204ENST00000434054 KRTAP9-2Q9BYQ4 174 aa6.14□□□□□ -1.43
CLCN2-204ENST00000434054 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
CLCN2-204ENST00000434054 KRTAP19-7Q3SYF9 63 aa6.04□□□□□ -1.44
CLCN2-204ENST00000434054 MACF1Q9UPN3 7388 aaKnown RBP5.98□□□□□ -1.45
CLCN2-204ENST00000434054 KRTAP2-3P0C7H8 128 aa5.93□□□□□ -1.46
CLCN2-204ENST00000434054 KRTAP2-4Q9BYR9 128 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms