RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 PCLOQ9Y6V0 5065 aa10.02□□□□□ -0.81
VRK2-205ENST00000432057 A8MU10 97 aa9.99□□□□□ -0.81
VRK2-205ENST00000432057 LCA10Q71F78 164 aa9.93□□□□□ -0.82
VRK2-205ENST00000432057 SVIPQ8NHG7 77 aa9.92□□□□□ -0.82
VRK2-205ENST00000432057 CDC42SE1Q9NRR8 79 aa9.88□□□□□ -0.83
VRK2-205ENST00000432057 SEC61GP60059 68 aa9.85□□□□□ -0.83
VRK2-205ENST00000432057 SEC61BP60468 96 aaKnown RBP9.85□□□□□ -0.83
VRK2-205ENST00000432057 S4R3F8 94 aa9.85□□□□□ -0.83
VRK2-205ENST00000432057 KRTAP3-3Q9BYR6 98 aa9.84□□□□□ -0.83
VRK2-205ENST00000432057 H1FX-AS1Q4G0G2 97 aa9.81□□□□□ -0.84
VRK2-205ENST00000432057 RBM12B-AS1Q9P1G2 102 aa9.8□□□□□ -0.84
VRK2-205ENST00000432057 MUC17Q685J3 4493 aa9.79□□□□□ -0.84
VRK2-205ENST00000432057 UQCR11O14957 56 aa9.77□□□□□ -0.85
VRK2-205ENST00000432057 HERC1Q15751 4861 aa9.75□□□□□ -0.85
VRK2-205ENST00000432057 KRTAP4-1Q9BYQ7 146 aa9.74□□□□□ -0.85
VRK2-205ENST00000432057 MIR22HGQ0VDD5 57 aa9.71□□□□□ -0.85
VRK2-205ENST00000432057 SPATA8Q6RVD6 105 aa9.71□□□□□ -0.85
VRK2-205ENST00000432057 A0A1B0GU33 70 aa9.64□□□□□ -0.87
VRK2-205ENST00000432057 HMCN2Q8NDA2 5059 aa9.64□□□□□ -0.87
VRK2-205ENST00000432057 H0YAA0 97 aa9.59□□□□□ -0.87
VRK2-205ENST00000432057 PMAIP1Q13794 54 aa9.59□□□□□ -0.87
VRK2-205ENST00000432057 KRTAP10-6P60371 365 aaPredicted RBP9.58□□□□□ -0.88
VRK2-205ENST00000432057 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
VRK2-205ENST00000432057 CSAG1Q6PB30 78 aa9.54□□□□□ -0.88
VRK2-205ENST00000432057 A6NN06 94 aa9.52□□□□□ -0.89
VRK2-205ENST00000432057 KRTAP19-2Q3LHN2 52 aa9.49□□□□□ -0.89
VRK2-205ENST00000432057 P0C880 135 aa9.49□□□□□ -0.89
VRK2-205ENST00000432057 ADM2Q7Z4H4 148 aa9.47□□□□□ -0.89
VRK2-205ENST00000432057 KRTAP13-4Q3LI77 160 aa9.42□□□□□ -0.9
VRK2-205ENST00000432057 MUC2Q02817 5179 aa9.39□□□□□ -0.91
VRK2-205ENST00000432057 KTN1-AS1Q86SY8 53 aa9.3□□□□□ -0.92
VRK2-205ENST00000432057 FLGP20930 4061 aaPredicted RBP9.29□□□□□ -0.92
VRK2-205ENST00000432057 A0A0D9SG42 100 aa9.27□□□□□ -0.93
VRK2-205ENST00000432057 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
VRK2-205ENST00000432057 RNF213Q63HN8 5207 aa9.16□□□□□ -0.94
VRK2-205ENST00000432057 K7ERS5 55 aa9.16□□□□□ -0.94
VRK2-205ENST00000432057 M0QZ58 72 aa9.16□□□□□ -0.94
VRK2-205ENST00000432057 LCE2CQ5TA81 110 aa9.14□□□□□ -0.95
VRK2-205ENST00000432057 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
VRK2-205ENST00000432057 R4GN34 69 aa9.08□□□□□ -0.96
VRK2-205ENST00000432057 KRTAP12-2P59991 146 aa9.05□□□□□ -0.96
VRK2-205ENST00000432057 PRAC1Q96KF2 57 aa9.05□□□□□ -0.96
VRK2-205ENST00000432057 KRTAP12-1P59990 96 aa9.03□□□□□ -0.96
VRK2-205ENST00000432057 SPINT4Q6UDR6 99 aa9□□□□□ -0.97
VRK2-205ENST00000432057 LINC01554Q52M75 96 aa9□□□□□ -0.97
VRK2-205ENST00000432057 FAT4Q6V0I7 4981 aa9□□□□□ -0.97
VRK2-205ENST00000432057 MT1HP80294 61 aa8.93□□□□□ -0.98
VRK2-205ENST00000432057 ROMO1P60602 79 aa8.88□□□□□ -0.99
VRK2-205ENST00000432057 M0R2T5 61 aa8.87□□□□□ -0.99
VRK2-205ENST00000432057 CRIPTQ9P021 101 aa8.79□□□□□ -1
VRK2-205ENST00000432057 KRTAP25-1Q3LHN0 102 aa8.68□□□□□ -1.02
VRK2-205ENST00000432057 MT2AP02795 61 aa8.66□□□□□ -1.02
VRK2-205ENST00000432057 MT1FP04733 61 aa8.64□□□□□ -1.03
VRK2-205ENST00000432057 KRTAP9-8Q9BYQ0 159 aa8.64□□□□□ -1.03
VRK2-205ENST00000432057 KRTAP10-10P60014 251 aa8.6□□□□□ -1.03
VRK2-205ENST00000432057 SPRR2GQ9BYE4 73 aa8.6□□□□□ -1.03
VRK2-205ENST00000432057 KRTAP19-1Q8IUB9 90 aa8.58□□□□□ -1.04
VRK2-205ENST00000432057 CAMK2N1Q7Z7J9 78 aa8.55□□□□□ -1.04
VRK2-205ENST00000432057 C10orf95Q9H7T3 257 aa8.55□□□□□ -1.04
VRK2-205ENST00000432057 LCE2AQ5TA79 106 aaPredicted RBP8.53□□□□□ -1.04
VRK2-205ENST00000432057 PLAC4Q8WY50 150 aa8.38□□□□□ -1.07
VRK2-205ENST00000432057 KRTAP19-8Q3LI54 63 aa8.32□□□□□ -1.08
VRK2-205ENST00000432057 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
VRK2-205ENST00000432057 MT1BP07438 61 aa8.23□□□□□ -1.09
VRK2-205ENST00000432057 TNP1P09430 55 aa8.15□□□□□ -1.1
VRK2-205ENST00000432057 LCE2BO14633 110 aa8.06□□□□□ -1.12
VRK2-205ENST00000432057 PP632Q6XCG6 107 aa8.04□□□□□ -1.12
VRK2-205ENST00000432057 MT1XP80297 61 aa8.04□□□□□ -1.12
VRK2-205ENST00000432057 KRTAP10-5P60370 271 aa8.03□□□□□ -1.12
VRK2-205ENST00000432057 KRTAP23-1A1A580 65 aa7.92□□□□□ -1.14
VRK2-205ENST00000432057 LCE3AQ5TA76 89 aa7.83□□□□□ -1.16
VRK2-205ENST00000432057 PRO2289Q9P1D8 64 aa7.83□□□□□ -1.16
VRK2-205ENST00000432057 USH2AO75445 5202 aa7.82□□□□□ -1.16
VRK2-205ENST00000432057 KRTAP15-1Q3LI76 137 aa7.78□□□□□ -1.16
VRK2-205ENST00000432057 LCE2DQ5TA82 110 aaPredicted RBP7.77□□□□□ -1.17
VRK2-205ENST00000432057 KRTAP10-7P60409 375 aaPredicted RBP7.77□□□□□ -1.17
VRK2-205ENST00000432057 KRTAP10-12P60413 245 aa7.72□□□□□ -1.17
VRK2-205ENST00000432057 KRTAP8-1Q8IUC2 63 aa7.62□□□□□ -1.19
VRK2-205ENST00000432057 SSPOA2VEC9 5147 aa7.57□□□□□ -1.2
VRK2-205ENST00000432057 KRTAP19-6Q3LI70 58 aa7.52□□□□□ -1.21
VRK2-205ENST00000432057 FSIP2Q5CZC0 6907 aa7.49□□□□□ -1.21
VRK2-205ENST00000432057 KRTAP12-3P60328 96 aa7.47□□□□□ -1.21
VRK2-205ENST00000432057 KRTAP9-2Q9BYQ4 174 aa7.47□□□□□ -1.21
VRK2-205ENST00000432057 KMT2DO14686 5537 aa7.39□□□□□ -1.23
VRK2-205ENST00000432057 KRTAP4-8A0A0G2JLE6 195 aa7.39□□□□□ -1.23
VRK2-205ENST00000432057 KRTAP4-8Q9BYQ9 185 aa7.39□□□□□ -1.23
VRK2-205ENST00000432057 KRTAP19-5Q3LI72 72 aa7.35□□□□□ -1.23
VRK2-205ENST00000432057 NDUFAF8A1L188 74 aa7.34□□□□□ -1.23
VRK2-205ENST00000432057 SPRR5A0A1B0GTR4 108 aa7.31□□□□□ -1.24
VRK2-205ENST00000432057 CRCT1Q9UGL9 99 aa7.21□□□□□ -1.26
VRK2-205ENST00000432057 FCGBPQ9Y6R7 5405 aaPredicted RBP7.19□□□□□ -1.26
VRK2-205ENST00000432057 LUZP6Q538Z0 58 aa7.19□□□□□ -1.26
VRK2-205ENST00000432057 KRTAP19-7Q3SYF9 63 aa7.17□□□□□ -1.26
VRK2-205ENST00000432057 MT1EP04732 61 aa7.02□□□□□ -1.29
VRK2-205ENST00000432057 LCE3CQ5T5A8 94 aa6.99□□□□□ -1.29
VRK2-205ENST00000432057 H3BS24 57 aa6.96□□□□□ -1.29
VRK2-205ENST00000432057 MT1LQ93083 61 aa6.92□□□□□ -1.3
VRK2-205ENST00000432057 KRTAP9-6A0A140TA67 174 aa6.9□□□□□ -1.31
VRK2-205ENST00000432057 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
VRK2-205ENST00000432057 MACF1Q9UPN3 7388 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms