RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 H1FX-AS1Q4G0G2 97 aa5.37□□□□□ -1.55
CRIM1-204ENST00000428774 ACYP2P14621 99 aa5.36□□□□□ -1.55
CRIM1-204ENST00000428774 COA5Q86WW8 74 aa5.35□□□□□ -1.55
CRIM1-204ENST00000428774 LCE2AQ5TA79 106 aaPredicted RBP5.34□□□□□ -1.55
CRIM1-204ENST00000428774 S4R3F8 94 aa5.33□□□□□ -1.56
CRIM1-204ENST00000428774 FLGP20930 4061 aaPredicted RBP5.33□□□□□ -1.56
CRIM1-204ENST00000428774 MT1HP80294 61 aa5.31□□□□□ -1.56
CRIM1-204ENST00000428774 LCA10Q71F78 164 aa5.31□□□□□ -1.56
CRIM1-204ENST00000428774 SERP1Q9Y6X1 66 aa5.29□□□□□ -1.56
CRIM1-204ENST00000428774 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
CRIM1-204ENST00000428774 CHKB-CPT1BH3BT56 60 aa5.28□□□□□ -1.56
CRIM1-204ENST00000428774 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
CRIM1-204ENST00000428774 M0R2T5 61 aa5.18□□□□□ -1.58
CRIM1-204ENST00000428774 RPS28P62857 69 aaKnown RBP5.18□□□□□ -1.58
CRIM1-204ENST00000428774 CSAG1Q6PB30 78 aa5.18□□□□□ -1.58
CRIM1-204ENST00000428774 SPTSSBQ8NFR3 76 aa5.18□□□□□ -1.58
CRIM1-204ENST00000428774 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
CRIM1-204ENST00000428774 LORP23490 312 aaPredicted RBP5.14□□□□□ -1.59
CRIM1-204ENST00000428774 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
CRIM1-204ENST00000428774 H0YAA0 97 aa5.09□□□□□ -1.59
CRIM1-204ENST00000428774 LINC01558Q9Y6Z2 57 aa5.08□□□□□ -1.6
CRIM1-204ENST00000428774 KRTAP9-8Q9BYQ0 159 aa5.07□□□□□ -1.6
CRIM1-204ENST00000428774 ADM2Q7Z4H4 148 aa5.06□□□□□ -1.6
CRIM1-204ENST00000428774 MT2AP02795 61 aa5.05□□□□□ -1.6
CRIM1-204ENST00000428774 Q1T7F1 81 aa5.05□□□□□ -1.6
CRIM1-204ENST00000428774 P0C880 135 aa5.04□□□□□ -1.6
CRIM1-204ENST00000428774 A0A1B0GU69 56 aa5.03□□□□□ -1.6
CRIM1-204ENST00000428774 MT1FP04733 61 aa5.02□□□□□ -1.61
CRIM1-204ENST00000428774 PRR15LQ9BU68 103 aa5.02□□□□□ -1.61
CRIM1-204ENST00000428774 V9GYY9 64 aa5.02□□□□□ -1.61
CRIM1-204ENST00000428774 SEC61GP60059 68 aa4.99□□□□□ -1.61
CRIM1-204ENST00000428774 PSPHP1O15172 72 aa4.98□□□□□ -1.61
CRIM1-204ENST00000428774 Q5VV11 94 aa4.96□□□□□ -1.62
CRIM1-204ENST00000428774 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
CRIM1-204ENST00000428774 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
CRIM1-204ENST00000428774 KRTAP13-4Q3LI77 160 aa4.92□□□□□ -1.62
CRIM1-204ENST00000428774 A0A1B0GU33 70 aa4.91□□□□□ -1.62
CRIM1-204ENST00000428774 M0QZ58 72 aa4.89□□□□□ -1.63
CRIM1-204ENST00000428774 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
CRIM1-204ENST00000428774 CRIPTQ9P021 101 aa4.88□□□□□ -1.63
CRIM1-204ENST00000428774 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
CRIM1-204ENST00000428774 SPATA8Q6RVD6 105 aa4.87□□□□□ -1.63
CRIM1-204ENST00000428774 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
CRIM1-204ENST00000428774 R4GN34 69 aa4.87□□□□□ -1.63
CRIM1-204ENST00000428774 SPRR2GQ9BYE4 73 aa4.85□□□□□ -1.63
CRIM1-204ENST00000428774 UQCR11O14957 56 aa4.84□□□□□ -1.63
CRIM1-204ENST00000428774 A6NED7 52 aa4.82□□□□□ -1.64
CRIM1-204ENST00000428774 USH2AO75445 5202 aa4.81□□□□□ -1.64
CRIM1-204ENST00000428774 A8MU10 97 aa4.8□□□□□ -1.64
CRIM1-204ENST00000428774 MIR22HGQ0VDD5 57 aa4.79□□□□□ -1.64
CRIM1-204ENST00000428774 LINC01554Q52M75 96 aa4.78□□□□□ -1.64
CRIM1-204ENST00000428774 A0A0D9SG42 100 aa4.77□□□□□ -1.65
CRIM1-204ENST00000428774 KRTAP19-8Q3LI54 63 aa4.76□□□□□ -1.65
CRIM1-204ENST00000428774 MT1BP07438 61 aa4.73□□□□□ -1.65
CRIM1-204ENST00000428774 CDC42SE1Q9NRR8 79 aa4.73□□□□□ -1.65
CRIM1-204ENST00000428774 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
CRIM1-204ENST00000428774 SSPOA2VEC9 5147 aa4.71□□□□□ -1.66
CRIM1-204ENST00000428774 A6NN06 94 aa4.7□□□□□ -1.66
CRIM1-204ENST00000428774 KRTAP9-7A8MTY7 169 aa4.68□□□□□ -1.66
CRIM1-204ENST00000428774 KRTAP12-2P59991 146 aa4.68□□□□□ -1.66
CRIM1-204ENST00000428774 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
CRIM1-204ENST00000428774 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
CRIM1-204ENST00000428774 PLAC4Q8WY50 150 aa4.61□□□□□ -1.67
CRIM1-204ENST00000428774 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
CRIM1-204ENST00000428774 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.56□□□□□ -1.68
CRIM1-204ENST00000428774 K7ERS5 55 aa4.55□□□□□ -1.68
CRIM1-204ENST00000428774 CAMK2N1Q7Z7J9 78 aa4.55□□□□□ -1.68
CRIM1-204ENST00000428774 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
CRIM1-204ENST00000428774 MT1XP80297 61 aa4.54□□□□□ -1.68
CRIM1-204ENST00000428774 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
CRIM1-204ENST00000428774 PRO0628Q9UI54 55 aa4.48□□□□□ -1.69
CRIM1-204ENST00000428774 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
CRIM1-204ENST00000428774 PRO2289Q9P1D8 64 aa4.44□□□□□ -1.7
CRIM1-204ENST00000428774 H3BS24 57 aa4.42□□□□□ -1.7
CRIM1-204ENST00000428774 SVIPQ8NHG7 77 aa4.4□□□□□ -1.71
CRIM1-204ENST00000428774 ROMO1P60602 79 aa4.38□□□□□ -1.71
CRIM1-204ENST00000428774 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
CRIM1-204ENST00000428774 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
CRIM1-204ENST00000428774 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
CRIM1-204ENST00000428774 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
CRIM1-204ENST00000428774 KRTAP4-6Q9BYQ5 205 aa4.31□□□□□ -1.72
CRIM1-204ENST00000428774 TNP1P09430 55 aa4.3□□□□□ -1.72
CRIM1-204ENST00000428774 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
CRIM1-204ENST00000428774 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
CRIM1-204ENST00000428774 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
CRIM1-204ENST00000428774 KMT2DO14686 5537 aa4.2□□□□□ -1.74
CRIM1-204ENST00000428774 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
CRIM1-204ENST00000428774 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
CRIM1-204ENST00000428774 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
CRIM1-204ENST00000428774 KRTAP4-8Q9BYQ9 185 aa4.2□□□□□ -1.74
CRIM1-204ENST00000428774 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
CRIM1-204ENST00000428774 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
CRIM1-204ENST00000428774 NEBP20929 6669 aa4.14□□□□□ -1.75
CRIM1-204ENST00000428774 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
CRIM1-204ENST00000428774 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
CRIM1-204ENST00000428774 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
CRIM1-204ENST00000428774 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
CRIM1-204ENST00000428774 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
CRIM1-204ENST00000428774 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
CRIM1-204ENST00000428774 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms