RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 OTOGQ6ZRI0 2925 aa4.6□□□□□ -1.67
POLR2J4-202ENST00000427076 AKAP9Q99996 3911 aa4.54□□□□□ -1.68
POLR2J4-202ENST00000427076 KRTAP10-4P60372 401 aaPredicted RBP4.53□□□□□ -1.68
POLR2J4-202ENST00000427076 TRRAPQ9Y4A5 3859 aa4.47□□□□□ -1.69
POLR2J4-202ENST00000427076 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
POLR2J4-202ENST00000427076 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
POLR2J4-202ENST00000427076 MT1HP80294 61 aa4.4□□□□□ -1.71
POLR2J4-202ENST00000427076 FRAS1Q86XX4 4008 aa4.39□□□□□ -1.71
POLR2J4-202ENST00000427076 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
POLR2J4-202ENST00000427076 BSNQ9UPA5 3926 aa4.36□□□□□ -1.71
POLR2J4-202ENST00000427076 DNAH8Q96JB1 4490 aa4.35□□□□□ -1.71
POLR2J4-202ENST00000427076 LCE3BQ5TA77 95 aa4.34□□□□□ -1.72
POLR2J4-202ENST00000427076 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
POLR2J4-202ENST00000427076 KRTAP4-1Q9BYQ7 146 aa4.31□□□□□ -1.72
POLR2J4-202ENST00000427076 DNAH2Q9P225 4427 aa4.31□□□□□ -1.72
POLR2J4-202ENST00000427076 DNAH1Q9P2D7 4330 aa4.28□□□□□ -1.72
POLR2J4-202ENST00000427076 DNAH10Q8IVF4 4471 aa4.27□□□□□ -1.73
POLR2J4-202ENST00000427076 MT2AP02795 61 aa4.26□□□□□ -1.73
POLR2J4-202ENST00000427076 SPRR2EP22531 72 aa4.25□□□□□ -1.73
POLR2J4-202ENST00000427076 SPRR2BP35325 72 aa4.25□□□□□ -1.73
POLR2J4-202ENST00000427076 SPRR2AP35326 72 aa4.25□□□□□ -1.73
POLR2J4-202ENST00000427076 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
POLR2J4-202ENST00000427076 ANK2Q01484 3957 aa4.2□□□□□ -1.74
POLR2J4-202ENST00000427076 DNAH9Q9NYC9 4486 aa4.2□□□□□ -1.74
POLR2J4-202ENST00000427076 MT1FP04733 61 aa4.18□□□□□ -1.74
POLR2J4-202ENST00000427076 DNAH3Q8TD57 4116 aa4.17□□□□□ -1.74
POLR2J4-202ENST00000427076 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
POLR2J4-202ENST00000427076 SPRR2DP22532 72 aa4.11□□□□□ -1.75
POLR2J4-202ENST00000427076 MT1GP13640 62 aa4.1□□□□□ -1.75
POLR2J4-202ENST00000427076 DNAH11Q96DT5 4516 aa4.06□□□□□ -1.76
POLR2J4-202ENST00000427076 CMYA5Q8N3K9 4069 aa4.04□□□□□ -1.76
POLR2J4-202ENST00000427076 DNAH5Q8TE73 4624 aa4.03□□□□□ -1.76
POLR2J4-202ENST00000427076 FAT2Q9NYQ8 4349 aa4.03□□□□□ -1.76
POLR2J4-202ENST00000427076 DNAH17Q9UFH2 4485 aa4.01□□□□□ -1.77
POLR2J4-202ENST00000427076 LCE2BO14633 110 aa4.01□□□□□ -1.77
POLR2J4-202ENST00000427076 DNAH7Q8WXX0 4024 aa4□□□□□ -1.77
POLR2J4-202ENST00000427076 ZNF469Q96JG9 3925 aaPredicted RBP3.98□□□□□ -1.77
POLR2J4-202ENST00000427076 LYSTQ99698 3801 aa3.97□□□□□ -1.77
POLR2J4-202ENST00000427076 FAT1Q14517 4588 aa3.96□□□□□ -1.78
POLR2J4-202ENST00000427076 DNAH6Q9C0G6 4158 aa3.96□□□□□ -1.78
POLR2J4-202ENST00000427076 PLECQ15149 4684 aaKnown RBP3.95□□□□□ -1.78
POLR2J4-202ENST00000427076 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
POLR2J4-202ENST00000427076 DYNC2H1Q8NCM8 4307 aaKnown RBP3.91□□□□□ -1.78
POLR2J4-202ENST00000427076 PRKDCP78527 4128 aaKnown RBP3.91□□□□□ -1.78
POLR2J4-202ENST00000427076 VPS13BQ7Z7G8 4022 aa3.91□□□□□ -1.78
POLR2J4-202ENST00000427076 VPS13DQ5THJ4 4388 aa3.89□□□□□ -1.79
POLR2J4-202ENST00000427076 KMT2AQ03164 3969 aa3.89□□□□□ -1.79
POLR2J4-202ENST00000427076 PRM1P04553 51 aa3.88□□□□□ -1.79
POLR2J4-202ENST00000427076 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
POLR2J4-202ENST00000427076 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
POLR2J4-202ENST00000427076 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.8
POLR2J4-202ENST00000427076 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
POLR2J4-202ENST00000427076 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
POLR2J4-202ENST00000427076 SACSQ9NZJ4 4579 aa3.82□□□□□ -1.8
POLR2J4-202ENST00000427076 APOBP04114 4563 aaKnown RBP3.82□□□□□ -1.8
POLR2J4-202ENST00000427076 LRP1BQ9NZR2 4599 aa3.82□□□□□ -1.8
POLR2J4-202ENST00000427076 DYNC1H1Q14204 4646 aaKnown RBP3.81□□□□□ -1.8
POLR2J4-202ENST00000427076 DNHD1Q96M86 4753 aa3.8□□□□□ -1.8
POLR2J4-202ENST00000427076 MT1XP80297 61 aa3.79□□□□□ -1.8
POLR2J4-202ENST00000427076 LCE2CQ5TA81 110 aa3.79□□□□□ -1.8
POLR2J4-202ENST00000427076 KRTAP19-1Q8IUB9 90 aa3.76□□□□□ -1.81
POLR2J4-202ENST00000427076 KRTAP19-8Q3LI54 63 aa3.76□□□□□ -1.81
POLR2J4-202ENST00000427076 STARD9Q9P2P6 4700 aa3.76□□□□□ -1.81
POLR2J4-202ENST00000427076 HECTD4Q9Y4D8 3996 aa3.75□□□□□ -1.81
POLR2J4-202ENST00000427076 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
POLR2J4-202ENST00000427076 LCE2DQ5TA82 110 aaPredicted RBP3.74□□□□□ -1.81
POLR2J4-202ENST00000427076 MT4P47944 62 aa3.72□□□□□ -1.81
POLR2J4-202ENST00000427076 RYR1P21817 5038 aa3.7□□□□□ -1.82
POLR2J4-202ENST00000427076 LOC100996750A0A140TA64 210 aa3.69□□□□□ -1.82
POLR2J4-202ENST00000427076 MT1BP07438 61 aa3.67□□□□□ -1.82
POLR2J4-202ENST00000427076 FAT3Q8TDW7 4589 aa3.65□□□□□ -1.82
POLR2J4-202ENST00000427076 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
POLR2J4-202ENST00000427076 KIAA1109Q2LD37 5005 aa3.62□□□□□ -1.83
POLR2J4-202ENST00000427076 KRTAP9-8Q9BYQ0 159 aa3.62□□□□□ -1.83
POLR2J4-202ENST00000427076 PKD1P98161 4303 aa3.61□□□□□ -1.83
POLR2J4-202ENST00000427076 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
POLR2J4-202ENST00000427076 LPAP08519 4548 aa3.6□□□□□ -1.83
POLR2J4-202ENST00000427076 PKHD1L1Q86WI1 4243 aa3.59□□□□□ -1.83
POLR2J4-202ENST00000427076 KRTAP17-1Q9BYP8 105 aa3.59□□□□□ -1.84
POLR2J4-202ENST00000427076 KRTAP19-3Q7Z4W3 81 aa3.57□□□□□ -1.84
POLR2J4-202ENST00000427076 KRTAP9-3Q9BYQ3 159 aa3.56□□□□□ -1.84
POLR2J4-202ENST00000427076 LRP1Q07954 4544 aaKnown RBP3.56□□□□□ -1.84
POLR2J4-202ENST00000427076 MYCBP2O75592 4640 aa3.56□□□□□ -1.84
POLR2J4-202ENST00000427076 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
POLR2J4-202ENST00000427076 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
POLR2J4-202ENST00000427076 MT1LQ93083 61 aa3.49□□□□□ -1.85
POLR2J4-202ENST00000427076 MT3P25713 68 aa3.47□□□□□ -1.85
POLR2J4-202ENST00000427076 HERC1Q15751 4861 aa3.46□□□□□ -1.86
POLR2J4-202ENST00000427076 RYR3Q15413 4870 aa3.46□□□□□ -1.86
POLR2J4-202ENST00000427076 RYR2Q92736 4967 aa3.45□□□□□ -1.86
POLR2J4-202ENST00000427076 HSPG2P98160 4391 aa3.45□□□□□ -1.86
POLR2J4-202ENST00000427076 MT1EP04732 61 aa3.44□□□□□ -1.86
POLR2J4-202ENST00000427076 FLGP20930 4061 aaPredicted RBP3.41□□□□□ -1.86
POLR2J4-202ENST00000427076 LCE5AQ5TCM9 118 aa3.39□□□□□ -1.87
POLR2J4-202ENST00000427076 MUC17Q685J3 4493 aa3.39□□□□□ -1.87
POLR2J4-202ENST00000427076 MT1MQ8N339 61 aa3.38□□□□□ -1.87
POLR2J4-202ENST00000427076 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
POLR2J4-202ENST00000427076 KRTAP9-2Q9BYQ4 174 aa3.37□□□□□ -1.87
POLR2J4-202ENST00000427076 TNXBP22105 4242 aa3.34□□□□□ -1.87
POLR2J4-202ENST00000427076 HYDINQ4G0P3 5121 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms