RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 A0A1B0GU33 70 aa7.26□□□□□ -1.25
USP42-203ENST00000426246 LINC01554Q52M75 96 aa7.24□□□□□ -1.25
USP42-203ENST00000426246 J3QL48 77 aa7.2□□□□□ -1.26
USP42-203ENST00000426246 Q5VSD8 79 aa7.2□□□□□ -1.26
USP42-203ENST00000426246 RPS29P62273 56 aaKnown RBP7.19□□□□□ -1.26
USP42-203ENST00000426246 K7ERS5 55 aa7.17□□□□□ -1.26
USP42-203ENST00000426246 A0A0A0MQY5 61 aa7.15□□□□□ -1.26
USP42-203ENST00000426246 H0YAA0 97 aa7.15□□□□□ -1.27
USP42-203ENST00000426246 KRTAP10-8P60410 259 aa7.12□□□□□ -1.27
USP42-203ENST00000426246 KRTAP3-1Q9BYR8 98 aa7.11□□□□□ -1.27
USP42-203ENST00000426246 H1FX-AS1Q4G0G2 97 aa7.08□□□□□ -1.28
USP42-203ENST00000426246 ABCA13Q86UQ4 5058 aa7.07□□□□□ -1.28
USP42-203ENST00000426246 SPINT4Q6UDR6 99 aa7.07□□□□□ -1.28
USP42-203ENST00000426246 COX6B2Q6YFQ2 88 aa7.04□□□□□ -1.28
USP42-203ENST00000426246 MT1HL1P0DM35 61 aa7.03□□□□□ -1.28
USP42-203ENST00000426246 A8MUU9 505 aa7.03□□□□□ -1.28
USP42-203ENST00000426246 BIRC6Q9NR09 4857 aa7.02□□□□□ -1.28
USP42-203ENST00000426246 HERC2O95714 4834 aa7.01□□□□□ -1.29
USP42-203ENST00000426246 C20orf166-AS1Q96NR2 134 aa7.01□□□□□ -1.29
USP42-203ENST00000426246 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
USP42-203ENST00000426246 C10orf95Q9H7T3 257 aa6.95□□□□□ -1.3
USP42-203ENST00000426246 S4R3F8 94 aa6.94□□□□□ -1.3
USP42-203ENST00000426246 P0C880 135 aa6.91□□□□□ -1.3
USP42-203ENST00000426246 RPL37P61927 97 aaKnown RBP6.87□□□□□ -1.31
USP42-203ENST00000426246 KRTAP25-1Q3LHN0 102 aa6.87□□□□□ -1.31
USP42-203ENST00000426246 XP32Q5T750 250 aa6.86□□□□□ -1.31
USP42-203ENST00000426246 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
USP42-203ENST00000426246 LPAP08519 4548 aa6.85□□□□□ -1.31
USP42-203ENST00000426246 PCLOQ9Y6V0 5065 aa6.83□□□□□ -1.32
USP42-203ENST00000426246 LRP2P98164 4655 aa6.82□□□□□ -1.32
USP42-203ENST00000426246 ROMO1P60602 79 aa6.8□□□□□ -1.32
USP42-203ENST00000426246 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
USP42-203ENST00000426246 KRTAP3-3Q9BYR6 98 aa6.72□□□□□ -1.33
USP42-203ENST00000426246 M0QZ58 72 aa6.7□□□□□ -1.34
USP42-203ENST00000426246 HERC1Q15751 4861 aa6.69□□□□□ -1.34
USP42-203ENST00000426246 TPRXLQ17RH7 258 aa6.69□□□□□ -1.34
USP42-203ENST00000426246 KRTAP12-2P59991 146 aa6.68□□□□□ -1.34
USP42-203ENST00000426246 NDUFAF8A1L188 74 aa6.66□□□□□ -1.34
USP42-203ENST00000426246 R4GN34 69 aa6.66□□□□□ -1.34
USP42-203ENST00000426246 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
USP42-203ENST00000426246 HMCN2Q8NDA2 5059 aa6.6□□□□□ -1.35
USP42-203ENST00000426246 MUC17Q685J3 4493 aa6.59□□□□□ -1.35
USP42-203ENST00000426246 MUC2Q02817 5179 aa6.55□□□□□ -1.36
USP42-203ENST00000426246 KRTAP12-1P59990 96 aa6.5□□□□□ -1.37
USP42-203ENST00000426246 CAMK2N1Q7Z7J9 78 aa6.49□□□□□ -1.37
USP42-203ENST00000426246 KRTAP4-1Q9BYQ7 146 aa6.43□□□□□ -1.38
USP42-203ENST00000426246 LORP23490 312 aaPredicted RBP6.42□□□□□ -1.38
USP42-203ENST00000426246 SEC61BP60468 96 aaKnown RBP6.38□□□□□ -1.39
USP42-203ENST00000426246 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
USP42-203ENST00000426246 UBR4Q5T4S7 5183 aa6.33□□□□□ -1.4
USP42-203ENST00000426246 M0R2T5 61 aa6.28□□□□□ -1.4
USP42-203ENST00000426246 FLGP20930 4061 aaPredicted RBP6.26□□□□□ -1.41
USP42-203ENST00000426246 RNF213Q63HN8 5207 aa6.25□□□□□ -1.41
USP42-203ENST00000426246 FAT4Q6V0I7 4981 aa6.21□□□□□ -1.42
USP42-203ENST00000426246 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
USP42-203ENST00000426246 LUZP6Q538Z0 58 aa6.14□□□□□ -1.43
USP42-203ENST00000426246 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
USP42-203ENST00000426246 LCE2CQ5TA81 110 aa6.1□□□□□ -1.43
USP42-203ENST00000426246 TNP1P09430 55 aa5.94□□□□□ -1.46
USP42-203ENST00000426246 MT1HP80294 61 aa5.91□□□□□ -1.46
USP42-203ENST00000426246 KRTAP10-10P60014 251 aa5.88□□□□□ -1.47
USP42-203ENST00000426246 PP632Q6XCG6 107 aa5.74□□□□□ -1.49
USP42-203ENST00000426246 KRTAP9-8Q9BYQ0 159 aa5.74□□□□□ -1.49
USP42-203ENST00000426246 MT2AP02795 61 aa5.69□□□□□ -1.5
USP42-203ENST00000426246 MT1FP04733 61 aa5.68□□□□□ -1.5
USP42-203ENST00000426246 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.51
USP42-203ENST00000426246 SPRR2GQ9BYE4 73 aa5.64□□□□□ -1.51
USP42-203ENST00000426246 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
USP42-203ENST00000426246 LCE2AQ5TA79 106 aaPredicted RBP5.62□□□□□ -1.51
USP42-203ENST00000426246 LCE3AQ5TA76 89 aa5.61□□□□□ -1.51
USP42-203ENST00000426246 USH2AO75445 5202 aa5.6□□□□□ -1.51
USP42-203ENST00000426246 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
USP42-203ENST00000426246 KMT2DO14686 5537 aa5.48□□□□□ -1.53
USP42-203ENST00000426246 KRTAP19-8Q3LI54 63 aa5.47□□□□□ -1.53
USP42-203ENST00000426246 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
USP42-203ENST00000426246 MT1BP07438 61 aa5.42□□□□□ -1.54
USP42-203ENST00000426246 LCE2DQ5TA82 110 aaPredicted RBP5.42□□□□□ -1.54
USP42-203ENST00000426246 LCE2BO14633 110 aa5.36□□□□□ -1.55
USP42-203ENST00000426246 KRTAP10-12P60413 245 aa5.33□□□□□ -1.56
USP42-203ENST00000426246 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
USP42-203ENST00000426246 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
USP42-203ENST00000426246 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
USP42-203ENST00000426246 MT1XP80297 61 aa5.27□□□□□ -1.57
USP42-203ENST00000426246 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
USP42-203ENST00000426246 PRO2289Q9P1D8 64 aa5.16□□□□□ -1.58
USP42-203ENST00000426246 SSPOA2VEC9 5147 aa5.16□□□□□ -1.58
USP42-203ENST00000426246 KRTAP4-8A0A0G2JLE6 195 aa5.14□□□□□ -1.59
USP42-203ENST00000426246 KRTAP4-8Q9BYQ9 185 aa5.14□□□□□ -1.59
USP42-203ENST00000426246 DSTQ03001 7570 aaKnown RBP5.14□□□□□ -1.59
USP42-203ENST00000426246 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
USP42-203ENST00000426246 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
USP42-203ENST00000426246 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
USP42-203ENST00000426246 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
USP42-203ENST00000426246 CRCT1Q9UGL9 99 aa5.01□□□□□ -1.61
USP42-203ENST00000426246 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
USP42-203ENST00000426246 FCGBPQ9Y6R7 5405 aaPredicted RBP4.97□□□□□ -1.61
USP42-203ENST00000426246 KRTAP19-6Q3LI70 58 aa4.95□□□□□ -1.62
USP42-203ENST00000426246 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
USP42-203ENST00000426246 MUC12Q9UKN1 5478 aa4.84□□□□□ -1.63
USP42-203ENST00000426246 INE1O15225 51 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 222.9 ms