RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 S4R3F8 94 aa3.81□□□□□ -1.8
LSM8-204ENST00000424702 KIAA1109Q2LD37 5005 aa3.81□□□□□ -1.8
LSM8-204ENST00000424702 H1FX-AS1Q4G0G2 97 aa3.81□□□□□ -1.8
LSM8-204ENST00000424702 FAT3Q8TDW7 4589 aa3.81□□□□□ -1.8
LSM8-204ENST00000424702 Q1T7F1 81 aa3.8□□□□□ -1.8
LSM8-204ENST00000424702 KRTAP17-1Q9BYP8 105 aa3.79□□□□□ -1.8
LSM8-204ENST00000424702 LCE2AQ5TA79 106 aaPredicted RBP3.78□□□□□ -1.8
LSM8-204ENST00000424702 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
LSM8-204ENST00000424702 HERC2O95714 4834 aa3.75□□□□□ -1.81
LSM8-204ENST00000424702 HSPG2P98160 4391 aa3.74□□□□□ -1.81
LSM8-204ENST00000424702 TNXBP22105 4242 aa3.74□□□□□ -1.81
LSM8-204ENST00000424702 KTN1-AS1Q86SY8 53 aa3.73□□□□□ -1.81
LSM8-204ENST00000424702 UQCR11O14957 56 aa3.71□□□□□ -1.82
LSM8-204ENST00000424702 K7ERS5 55 aa3.7□□□□□ -1.82
LSM8-204ENST00000424702 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
LSM8-204ENST00000424702 Q5VV11 94 aa3.69□□□□□ -1.82
LSM8-204ENST00000424702 LCA10Q71F78 164 aa3.67□□□□□ -1.82
LSM8-204ENST00000424702 EPPK1P58107 5090 aaKnown RBP3.67□□□□□ -1.82
LSM8-204ENST00000424702 MIR22HGQ0VDD5 57 aa3.67□□□□□ -1.82
LSM8-204ENST00000424702 A0A1B0GU33 70 aa3.65□□□□□ -1.82
LSM8-204ENST00000424702 LPAP08519 4548 aa3.65□□□□□ -1.83
LSM8-204ENST00000424702 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
LSM8-204ENST00000424702 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
LSM8-204ENST00000424702 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
LSM8-204ENST00000424702 LINC01554Q52M75 96 aa3.62□□□□□ -1.83
LSM8-204ENST00000424702 ADM2Q7Z4H4 148 aa3.59□□□□□ -1.83
LSM8-204ENST00000424702 R4GN34 69 aa3.58□□□□□ -1.84
LSM8-204ENST00000424702 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
LSM8-204ENST00000424702 CRIPTQ9P021 101 aa3.56□□□□□ -1.84
LSM8-204ENST00000424702 A0A0D9SG42 100 aa3.56□□□□□ -1.84
LSM8-204ENST00000424702 LORP23490 312 aaPredicted RBP3.55□□□□□ -1.84
LSM8-204ENST00000424702 SPATA8Q6RVD6 105 aa3.54□□□□□ -1.84
LSM8-204ENST00000424702 KRTAP10-10P60014 251 aa3.54□□□□□ -1.84
LSM8-204ENST00000424702 ABCA13Q86UQ4 5058 aa3.53□□□□□ -1.84
LSM8-204ENST00000424702 PCLOQ9Y6V0 5065 aa3.53□□□□□ -1.84
LSM8-204ENST00000424702 M0QZ58 72 aa3.53□□□□□ -1.84
LSM8-204ENST00000424702 SPINT4Q6UDR6 99 aa3.51□□□□□ -1.85
LSM8-204ENST00000424702 PLAC4Q8WY50 150 aa3.5□□□□□ -1.85
LSM8-204ENST00000424702 HERC1Q15751 4861 aa3.5□□□□□ -1.85
LSM8-204ENST00000424702 LOC100996750A0A140TA64 210 aa3.5□□□□□ -1.85
LSM8-204ENST00000424702 H0YAA0 97 aa3.5□□□□□ -1.85
LSM8-204ENST00000424702 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
LSM8-204ENST00000424702 KRTAP4-1Q9BYQ7 146 aa3.49□□□□□ -1.85
LSM8-204ENST00000424702 A8MU10 97 aa3.48□□□□□ -1.85
LSM8-204ENST00000424702 P0C880 135 aa3.47□□□□□ -1.85
LSM8-204ENST00000424702 CAMK2N1Q7Z7J9 78 aa3.47□□□□□ -1.85
LSM8-204ENST00000424702 LRP2P98164 4655 aa3.44□□□□□ -1.86
LSM8-204ENST00000424702 KRTAP10-6P60371 365 aaPredicted RBP3.42□□□□□ -1.86
LSM8-204ENST00000424702 MT1HP80294 61 aa3.42□□□□□ -1.86
LSM8-204ENST00000424702 A6NN06 94 aa3.38□□□□□ -1.87
LSM8-204ENST00000424702 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
LSM8-204ENST00000424702 ROMO1P60602 79 aa3.35□□□□□ -1.87
LSM8-204ENST00000424702 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
LSM8-204ENST00000424702 HMCN2Q8NDA2 5059 aa3.32□□□□□ -1.88
LSM8-204ENST00000424702 KRTAP15-1Q3LI76 137 aa3.31□□□□□ -1.88
LSM8-204ENST00000424702 MUC17Q685J3 4493 aa3.31□□□□□ -1.88
LSM8-204ENST00000424702 FLGP20930 4061 aaPredicted RBP3.29□□□□□ -1.88
LSM8-204ENST00000424702 MT2AP02795 61 aa3.29□□□□□ -1.88
LSM8-204ENST00000424702 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
LSM8-204ENST00000424702 KRTAP12-2P59991 146 aa3.28□□□□□ -1.89
LSM8-204ENST00000424702 KRTAP19-2Q3LHN2 52 aa3.27□□□□□ -1.89
LSM8-204ENST00000424702 MT1FP04733 61 aa3.22□□□□□ -1.89
LSM8-204ENST00000424702 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
LSM8-204ENST00000424702 TNP1P09430 55 aa3.21□□□□□ -1.9
LSM8-204ENST00000424702 RNF213Q63HN8 5207 aa3.19□□□□□ -1.9
LSM8-204ENST00000424702 SPRR2GQ9BYE4 73 aa3.19□□□□□ -1.9
LSM8-204ENST00000424702 KRTAP9-8Q9BYQ0 159 aa3.17□□□□□ -1.9
LSM8-204ENST00000424702 KRTAP9-6A0A140TA67 174 aa3.16□□□□□ -1.9
LSM8-204ENST00000424702 KRTAP9-2Q9BYQ4 174 aa3.16□□□□□ -1.9
LSM8-204ENST00000424702 MUC2Q02817 5179 aa3.14□□□□□ -1.91
LSM8-204ENST00000424702 CRCT1Q9UGL9 99 aa3.12□□□□□ -1.91
LSM8-204ENST00000424702 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
LSM8-204ENST00000424702 KRTAP19-8Q3LI54 63 aa3.12□□□□□ -1.91
LSM8-204ENST00000424702 UBR4Q5T4S7 5183 aa3.11□□□□□ -1.91
LSM8-204ENST00000424702 KRTAP9-3Q9BYQ3 159 aa3.1□□□□□ -1.91
LSM8-204ENST00000424702 FAT4Q6V0I7 4981 aa3.09□□□□□ -1.91
LSM8-204ENST00000424702 PP632Q6XCG6 107 aa3.09□□□□□ -1.92
LSM8-204ENST00000424702 KRTAP19-1Q8IUB9 90 aa3.08□□□□□ -1.92
LSM8-204ENST00000424702 MT1BP07438 61 aa3□□□□□ -1.93
LSM8-204ENST00000424702 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
LSM8-204ENST00000424702 KRTAP10-12P60413 245 aa2.97□□□□□ -1.93
LSM8-204ENST00000424702 KRTAP4-8Q9BYQ9 185 aa2.96□□□□□ -1.93
LSM8-204ENST00000424702 KRTAP19-6Q3LI70 58 aa2.96□□□□□ -1.94
LSM8-204ENST00000424702 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.94□□□□□ -1.94
LSM8-204ENST00000424702 KRTAP19-4Q3LI73 84 aa2.94□□□□□ -1.94
LSM8-204ENST00000424702 KRTAP8-1Q8IUC2 63 aa2.93□□□□□ -1.94
LSM8-204ENST00000424702 MT1XP80297 61 aa2.89□□□□□ -1.95
LSM8-204ENST00000424702 KRTAP9-7A8MTY7 169 aa2.88□□□□□ -1.95
LSM8-204ENST00000424702 LCE3AQ5TA76 89 aa2.88□□□□□ -1.95
LSM8-204ENST00000424702 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
LSM8-204ENST00000424702 KRTAP4-8A0A0G2JLE6 195 aa2.81□□□□□ -1.96
LSM8-204ENST00000424702 KRTAP12-3P60328 96 aa2.81□□□□□ -1.96
LSM8-204ENST00000424702 KRTAP10-7P60409 375 aaPredicted RBP2.81□□□□□ -1.96
LSM8-204ENST00000424702 SPRR2FQ96RM1 72 aa2.79□□□□□ -1.96
LSM8-204ENST00000424702 KRTAP5-3Q6L8H2 238 aa2.78□□□□□ -1.96
LSM8-204ENST00000424702 KRTAP4-7Q9BYR0 210 aa2.77□□□□□ -1.97
LSM8-204ENST00000424702 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
LSM8-204ENST00000424702 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
LSM8-204ENST00000424702 SPRR2EP22531 72 aa2.72□□□□□ -1.97
LSM8-204ENST00000424702 SPRR2BP35325 72 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms