RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 LCE2CQ5TA81 110 aa4.72□□□□□ -1.65
VPS8-204ENST00000424463 LCE2AQ5TA79 106 aaPredicted RBP4.7□□□□□ -1.66
VPS8-204ENST00000424463 Q8N1X5 172 aa4.7□□□□□ -1.66
VPS8-204ENST00000424463 H0YAA0 97 aa4.7□□□□□ -1.66
VPS8-204ENST00000424463 TYMSOSQ8TAI1 123 aa4.69□□□□□ -1.66
VPS8-204ENST00000424463 KRTAP10-4P60372 401 aaPredicted RBP4.69□□□□□ -1.66
VPS8-204ENST00000424463 MRPL34Q9BQ48 92 aaKnown RBP4.65□□□□□ -1.67
VPS8-204ENST00000424463 SPINK1P00995 79 aa4.62□□□□□ -1.67
VPS8-204ENST00000424463 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
VPS8-204ENST00000424463 HSPG2P98160 4391 aa4.61□□□□□ -1.67
VPS8-204ENST00000424463 KRTAP17-1Q9BYP8 105 aa4.6□□□□□ -1.67
VPS8-204ENST00000424463 RYR1P21817 5038 aa4.59□□□□□ -1.68
VPS8-204ENST00000424463 PKHD1L1Q86WI1 4243 aa4.59□□□□□ -1.68
VPS8-204ENST00000424463 KRTAP13-3Q3SY46 172 aa4.58□□□□□ -1.68
VPS8-204ENST00000424463 LRP1Q07954 4544 aaKnown RBP4.57□□□□□ -1.68
VPS8-204ENST00000424463 KIAA1109Q2LD37 5005 aa4.57□□□□□ -1.68
VPS8-204ENST00000424463 EPPK1P58107 5090 aaKnown RBP4.56□□□□□ -1.68
VPS8-204ENST00000424463 Q5VSD8 79 aa4.55□□□□□ -1.68
VPS8-204ENST00000424463 LORP23490 312 aaPredicted RBP4.55□□□□□ -1.68
VPS8-204ENST00000424463 RPS29P62273 56 aaKnown RBP4.54□□□□□ -1.68
VPS8-204ENST00000424463 C10orf95Q9H7T3 257 aa4.52□□□□□ -1.69
VPS8-204ENST00000424463 TNXBP22105 4242 aa4.52□□□□□ -1.69
VPS8-204ENST00000424463 C9orf92A6NGG3 77 aa4.51□□□□□ -1.69
VPS8-204ENST00000424463 R4GN34 69 aa4.5□□□□□ -1.69
VPS8-204ENST00000424463 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
VPS8-204ENST00000424463 MYCBP2O75592 4640 aa4.48□□□□□ -1.69
VPS8-204ENST00000424463 FAT3Q8TDW7 4589 aa4.47□□□□□ -1.69
VPS8-204ENST00000424463 IGKV2-30P06310 120 aa4.46□□□□□ -1.7
VPS8-204ENST00000424463 IGKV2D-30A0A075B6S6 120 aa4.46□□□□□ -1.7
VPS8-204ENST00000424463 DMBT1Q9UGM3 2413 aaPredicted RBP4.43□□□□□ -1.7
VPS8-204ENST00000424463 H1FX-AS1Q4G0G2 97 aa4.43□□□□□ -1.7
VPS8-204ENST00000424463 MT1HL1P0DM35 61 aa4.41□□□□□ -1.7
VPS8-204ENST00000424463 PLAC4Q8WY50 150 aa4.41□□□□□ -1.7
VPS8-204ENST00000424463 KRTAP4-5Q9BYR2 181 aa4.41□□□□□ -1.7
VPS8-204ENST00000424463 ABCA13Q86UQ4 5058 aa4.36□□□□□ -1.71
VPS8-204ENST00000424463 XP32Q5T750 250 aa4.33□□□□□ -1.72
VPS8-204ENST00000424463 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
VPS8-204ENST00000424463 RPL37P61927 97 aaKnown RBP4.32□□□□□ -1.72
VPS8-204ENST00000424463 KRTAP3-1Q9BYR8 98 aa4.29□□□□□ -1.72
VPS8-204ENST00000424463 HERC2O95714 4834 aa4.27□□□□□ -1.73
VPS8-204ENST00000424463 LPAP08519 4548 aa4.26□□□□□ -1.73
VPS8-204ENST00000424463 INE1O15225 51 aa4.26□□□□□ -1.73
VPS8-204ENST00000424463 BIRC6Q9NR09 4857 aa4.26□□□□□ -1.73
VPS8-204ENST00000424463 LRP2P98164 4655 aa4.25□□□□□ -1.73
VPS8-204ENST00000424463 PCLOQ9Y6V0 5065 aa4.18□□□□□ -1.74
VPS8-204ENST00000424463 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.75
VPS8-204ENST00000424463 KRTAP12-2P59991 146 aa4.15□□□□□ -1.75
VPS8-204ENST00000424463 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
VPS8-204ENST00000424463 HERC1Q15751 4861 aa4.11□□□□□ -1.75
VPS8-204ENST00000424463 S4R3F8 94 aa4.1□□□□□ -1.75
VPS8-204ENST00000424463 KRTAP13-4Q3LI77 160 aa4.08□□□□□ -1.76
VPS8-204ENST00000424463 KRTAP4-1Q9BYQ7 146 aa4.07□□□□□ -1.76
VPS8-204ENST00000424463 MUC17Q685J3 4493 aa4.05□□□□□ -1.76
VPS8-204ENST00000424463 MUC2Q02817 5179 aa4.04□□□□□ -1.76
VPS8-204ENST00000424463 HMCN2Q8NDA2 5059 aa4.02□□□□□ -1.77
VPS8-204ENST00000424463 A0A0D9SG42 100 aa4.02□□□□□ -1.77
VPS8-204ENST00000424463 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
VPS8-204ENST00000424463 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
VPS8-204ENST00000424463 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
VPS8-204ENST00000424463 KRTAP19-2Q3LHN2 52 aa3.95□□□□□ -1.78
VPS8-204ENST00000424463 PP632Q6XCG6 107 aa3.9□□□□□ -1.78
VPS8-204ENST00000424463 RNF213Q63HN8 5207 aa3.9□□□□□ -1.79
VPS8-204ENST00000424463 UBR4Q5T4S7 5183 aa3.89□□□□□ -1.79
VPS8-204ENST00000424463 FLGP20930 4061 aaPredicted RBP3.85□□□□□ -1.79
VPS8-204ENST00000424463 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.79
VPS8-204ENST00000424463 FAT4Q6V0I7 4981 aa3.83□□□□□ -1.8
VPS8-204ENST00000424463 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
VPS8-204ENST00000424463 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
VPS8-204ENST00000424463 M0QZ58 72 aa3.79□□□□□ -1.8
VPS8-204ENST00000424463 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
VPS8-204ENST00000424463 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.81
VPS8-204ENST00000424463 MT1HP80294 61 aa3.7□□□□□ -1.82
VPS8-204ENST00000424463 M0R2T5 61 aa3.7□□□□□ -1.82
VPS8-204ENST00000424463 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
VPS8-204ENST00000424463 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
VPS8-204ENST00000424463 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
VPS8-204ENST00000424463 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
VPS8-204ENST00000424463 MT2AP02795 61 aa3.6□□□□□ -1.83
VPS8-204ENST00000424463 KRTAP9-8Q9BYQ0 159 aa3.6□□□□□ -1.83
VPS8-204ENST00000424463 MT1FP04733 61 aa3.59□□□□□ -1.83
VPS8-204ENST00000424463 KRTAP10-10P60014 251 aa3.59□□□□□ -1.84
VPS8-204ENST00000424463 SPRR2GQ9BYE4 73 aa3.55□□□□□ -1.84
VPS8-204ENST00000424463 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
VPS8-204ENST00000424463 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
VPS8-204ENST00000424463 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
VPS8-204ENST00000424463 KRTAP9-3Q9BYQ3 159 aa3.46□□□□□ -1.86
VPS8-204ENST00000424463 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
VPS8-204ENST00000424463 MT1BP07438 61 aa3.42□□□□□ -1.86
VPS8-204ENST00000424463 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
VPS8-204ENST00000424463 TNP1P09430 55 aa3.38□□□□□ -1.87
VPS8-204ENST00000424463 KRTAP9-7A8MTY7 169 aa3.38□□□□□ -1.87
VPS8-204ENST00000424463 KRTAP4-7Q9BYR0 210 aa3.38□□□□□ -1.87
VPS8-204ENST00000424463 USH2AO75445 5202 aa3.36□□□□□ -1.87
VPS8-204ENST00000424463 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
VPS8-204ENST00000424463 MT1XP80297 61 aa3.35□□□□□ -1.87
VPS8-204ENST00000424463 KRTAP4-9Q9BYQ8 210 aa3.31□□□□□ -1.88
VPS8-204ENST00000424463 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
VPS8-204ENST00000424463 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
VPS8-204ENST00000424463 KRTAP10-7P60409 375 aaPredicted RBP3.25□□□□□ -1.89
VPS8-204ENST00000424463 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms