RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 SERP2Q8N6R1 65 aa6.54□□□□□ -1.36
GTF3C2-204ENST00000423998 MT1FP04733 61 aa6.5□□□□□ -1.37
GTF3C2-204ENST00000423998 ACYP2P14621 99 aa6.49□□□□□ -1.37
GTF3C2-204ENST00000423998 DMAC1Q96GE9 116 aa6.48□□□□□ -1.37
GTF3C2-204ENST00000423998 SPTSSBQ8NFR3 76 aa6.45□□□□□ -1.38
GTF3C2-204ENST00000423998 C20orf197Q8N268 126 aa6.44□□□□□ -1.38
GTF3C2-204ENST00000423998 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
GTF3C2-204ENST00000423998 KRTAP9-6A0A140TA67 174 aa6.43□□□□□ -1.38
GTF3C2-204ENST00000423998 CRCT1Q9UGL9 99 aa6.43□□□□□ -1.38
GTF3C2-204ENST00000423998 H0YAA0 97 aa6.42□□□□□ -1.38
GTF3C2-204ENST00000423998 SPANXA2-OT1Q8N9U9 137 aa6.42□□□□□ -1.38
GTF3C2-204ENST00000423998 CRIPTQ9P021 101 aa6.42□□□□□ -1.38
GTF3C2-204ENST00000423998 SNURFQ9Y675 71 aa6.41□□□□□ -1.38
GTF3C2-204ENST00000423998 COX7CP15954 63 aa6.39□□□□□ -1.39
GTF3C2-204ENST00000423998 CHKB-CPT1BH3BT56 60 aa6.37□□□□□ -1.39
GTF3C2-204ENST00000423998 FSIP2Q5CZC0 6907 aa6.33□□□□□ -1.4
GTF3C2-204ENST00000423998 ANAPC13Q9BS18 74 aa6.32□□□□□ -1.4
GTF3C2-204ENST00000423998 LCE2BO14633 110 aa6.3□□□□□ -1.4
GTF3C2-204ENST00000423998 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
GTF3C2-204ENST00000423998 SPRR2GQ9BYE4 73 aa6.26□□□□□ -1.41
GTF3C2-204ENST00000423998 Q5VV11 94 aa6.22□□□□□ -1.41
GTF3C2-204ENST00000423998 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
GTF3C2-204ENST00000423998 R4GN34 69 aa6.2□□□□□ -1.42
GTF3C2-204ENST00000423998 H7BZZ5 65 aa6.18□□□□□ -1.42
GTF3C2-204ENST00000423998 USH2AO75445 5202 aa6.17□□□□□ -1.42
GTF3C2-204ENST00000423998 SEC61GP60059 68 aa6.15□□□□□ -1.42
GTF3C2-204ENST00000423998 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.42
GTF3C2-204ENST00000423998 KRTAP19-6Q3LI70 58 aa6.14□□□□□ -1.43
GTF3C2-204ENST00000423998 COA5Q86WW8 74 aa6.14□□□□□ -1.43
GTF3C2-204ENST00000423998 ATP5EP56381 51 aaPredicted RBP6.13□□□□□ -1.43
GTF3C2-204ENST00000423998 M0QZ58 72 aa6.09□□□□□ -1.43
GTF3C2-204ENST00000423998 P0C880 135 aa6.09□□□□□ -1.43
GTF3C2-204ENST00000423998 SERP1Q9Y6X1 66 aa6.09□□□□□ -1.43
GTF3C2-204ENST00000423998 PLAC4Q8WY50 150 aa6.08□□□□□ -1.44
GTF3C2-204ENST00000423998 CCDC179H3BU77 68 aa6.05□□□□□ -1.44
GTF3C2-204ENST00000423998 SSPOA2VEC9 5147 aa6.04□□□□□ -1.44
GTF3C2-204ENST00000423998 A6NN06 94 aa6.03□□□□□ -1.44
GTF3C2-204ENST00000423998 MT1BP07438 61 aa6.03□□□□□ -1.44
GTF3C2-204ENST00000423998 CYSTM1Q9H1C7 97 aa6.03□□□□□ -1.44
GTF3C2-204ENST00000423998 TMEM258P61165 79 aa6□□□□□ -1.45
GTF3C2-204ENST00000423998 PRO2289Q9P1D8 64 aa6□□□□□ -1.45
GTF3C2-204ENST00000423998 LINC01554Q52M75 96 aa5.98□□□□□ -1.45
GTF3C2-204ENST00000423998 FCGBPQ9Y6R7 5405 aaPredicted RBP5.93□□□□□ -1.46
GTF3C2-204ENST00000423998 A0A1B0GU69 56 aa5.92□□□□□ -1.46
GTF3C2-204ENST00000423998 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.92□□□□□ -1.46
GTF3C2-204ENST00000423998 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
GTF3C2-204ENST00000423998 PRR15LQ9BU68 103 aa5.91□□□□□ -1.46
GTF3C2-204ENST00000423998 A0A1B0GU33 70 aa5.89□□□□□ -1.47
GTF3C2-204ENST00000423998 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
GTF3C2-204ENST00000423998 SMIM26A0A096LP01 95 aa5.79□□□□□ -1.48
GTF3C2-204ENST00000423998 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
GTF3C2-204ENST00000423998 LINC01558Q9Y6Z2 57 aa5.76□□□□□ -1.49
GTF3C2-204ENST00000423998 V9GYY9 64 aa5.74□□□□□ -1.49
GTF3C2-204ENST00000423998 MT1XP80297 61 aa5.73□□□□□ -1.49
GTF3C2-204ENST00000423998 KRTAP13-4Q3LI77 160 aa5.73□□□□□ -1.49
GTF3C2-204ENST00000423998 SPATA8Q6RVD6 105 aa5.71□□□□□ -1.5
GTF3C2-204ENST00000423998 MACF1Q9UPN3 7388 aaKnown RBP5.71□□□□□ -1.5
GTF3C2-204ENST00000423998 A0A0D9SG42 100 aa5.7□□□□□ -1.5
GTF3C2-204ENST00000423998 KRTAP6-3Q3LI67 103 aa5.7□□□□□ -1.5
GTF3C2-204ENST00000423998 UQCR11O14957 56 aa5.67□□□□□ -1.5
GTF3C2-204ENST00000423998 PCP4P48539 62 aa5.67□□□□□ -1.5
GTF3C2-204ENST00000423998 KRTAP12-2P59991 146 aa5.66□□□□□ -1.5
GTF3C2-204ENST00000423998 SPINT4Q6UDR6 99 aa5.66□□□□□ -1.5
GTF3C2-204ENST00000423998 SYNE2Q8WXH0 6885 aaKnown RBP5.6□□□□□ -1.51
GTF3C2-204ENST00000423998 Q1T7F1 81 aa5.59□□□□□ -1.51
GTF3C2-204ENST00000423998 RPS28P62857 69 aaKnown RBP5.58□□□□□ -1.52
GTF3C2-204ENST00000423998 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
GTF3C2-204ENST00000423998 K7ERS5 55 aa5.53□□□□□ -1.52
GTF3C2-204ENST00000423998 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
GTF3C2-204ENST00000423998 A8MU10 97 aa5.51□□□□□ -1.53
GTF3C2-204ENST00000423998 KRTAP5-9P26371 169 aa5.51□□□□□ -1.53
GTF3C2-204ENST00000423998 MIR22HGQ0VDD5 57 aa5.51□□□□□ -1.53
GTF3C2-204ENST00000423998 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
GTF3C2-204ENST00000423998 PSPHP1O15172 72 aa5.47□□□□□ -1.53
GTF3C2-204ENST00000423998 KRTAP10-7P60409 375 aaPredicted RBP5.45□□□□□ -1.54
GTF3C2-204ENST00000423998 SPRR2FQ96RM1 72 aa5.42□□□□□ -1.54
GTF3C2-204ENST00000423998 A6NED7 52 aa5.4□□□□□ -1.54
GTF3C2-204ENST00000423998 TNP1P09430 55 aa5.39□□□□□ -1.55
GTF3C2-204ENST00000423998 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
GTF3C2-204ENST00000423998 KRTAP4-8Q9BYQ9 185 aa5.36□□□□□ -1.55
GTF3C2-204ENST00000423998 KMT2DO14686 5537 aa5.32□□□□□ -1.56
GTF3C2-204ENST00000423998 SPRR2EP22531 72 aa5.28□□□□□ -1.56
GTF3C2-204ENST00000423998 SPRR2BP35325 72 aa5.28□□□□□ -1.56
GTF3C2-204ENST00000423998 SPRR2AP35326 72 aa5.28□□□□□ -1.56
GTF3C2-204ENST00000423998 C10orf95Q9H7T3 257 aa5.27□□□□□ -1.57
GTF3C2-204ENST00000423998 MUC12Q9UKN1 5478 aa5.27□□□□□ -1.57
GTF3C2-204ENST00000423998 NEBP20929 6669 aa5.21□□□□□ -1.57
GTF3C2-204ENST00000423998 KRTAP25-1Q3LHN0 102 aa5.21□□□□□ -1.58
GTF3C2-204ENST00000423998 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
GTF3C2-204ENST00000423998 CDC42SE1Q9NRR8 79 aa5.19□□□□□ -1.58
GTF3C2-204ENST00000423998 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
GTF3C2-204ENST00000423998 SVIPQ8NHG7 77 aa5.16□□□□□ -1.58
GTF3C2-204ENST00000423998 KRTAP20-1Q3LI63 56 aa5.15□□□□□ -1.59
GTF3C2-204ENST00000423998 KRTAP2-3P0C7H8 128 aa5.13□□□□□ -1.59
GTF3C2-204ENST00000423998 KRTAP2-4Q9BYR9 128 aa5.13□□□□□ -1.59
GTF3C2-204ENST00000423998 SPRR2DP22532 72 aa5.11□□□□□ -1.59
GTF3C2-204ENST00000423998 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
GTF3C2-204ENST00000423998 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
GTF3C2-204ENST00000423998 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
GTF3C2-204ENST00000423998 MT1EP04732 61 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms