RNA–Protein interactions for RNA: ENST00000422086.5

TUBA3FP-202, Transcript of tubulin alpha 3f pseudogene, humanhuman

TSL 1 (best) BASIC

Gene TUBA3FP, Length 1,974 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3FP-202ENST00000422086 ABCA13Q86UQ4 5058 aa9.74□□□□□ -0.85
TUBA3FP-202ENST00000422086 RBM12B-AS1Q9P1G2 102 aa9.7□□□□□ -0.86
TUBA3FP-202ENST00000422086 LCA10Q71F78 164 aa9.68□□□□□ -0.86
TUBA3FP-202ENST00000422086 S4R3F8 94 aa9.68□□□□□ -0.86
TUBA3FP-202ENST00000422086 UQCR11O14957 56 aa9.67□□□□□ -0.86
TUBA3FP-202ENST00000422086 H1FX-AS1Q4G0G2 97 aa9.66□□□□□ -0.86
TUBA3FP-202ENST00000422086 LRP2P98164 4655 aa9.6□□□□□ -0.87
TUBA3FP-202ENST00000422086 A8MU10 97 aa9.59□□□□□ -0.87
TUBA3FP-202ENST00000422086 SPATA8Q6RVD6 105 aa9.58□□□□□ -0.88
TUBA3FP-202ENST00000422086 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
TUBA3FP-202ENST00000422086 MIR22HGQ0VDD5 57 aa9.57□□□□□ -0.88
TUBA3FP-202ENST00000422086 LPAP08519 4548 aa9.55□□□□□ -0.88
TUBA3FP-202ENST00000422086 A0A1B0GU33 70 aa9.49□□□□□ -0.89
TUBA3FP-202ENST00000422086 PMAIP1Q13794 54 aa9.44□□□□□ -0.9
TUBA3FP-202ENST00000422086 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
TUBA3FP-202ENST00000422086 MUC17Q685J3 4493 aa9.38□□□□□ -0.91
TUBA3FP-202ENST00000422086 H0YAA0 97 aa9.36□□□□□ -0.91
TUBA3FP-202ENST00000422086 KRTAP4-1Q9BYQ7 146 aa9.36□□□□□ -0.91
TUBA3FP-202ENST00000422086 KRTAP10-6P60371 365 aaPredicted RBP9.35□□□□□ -0.91
TUBA3FP-202ENST00000422086 A6NN06 94 aa9.34□□□□□ -0.91
TUBA3FP-202ENST00000422086 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
TUBA3FP-202ENST00000422086 ADM2Q7Z4H4 148 aa9.25□□□□□ -0.93
TUBA3FP-202ENST00000422086 PCLOQ9Y6V0 5065 aa9.25□□□□□ -0.93
TUBA3FP-202ENST00000422086 P0C880 135 aa9.21□□□□□ -0.94
TUBA3FP-202ENST00000422086 KRTAP19-2Q3LHN2 52 aa9.2□□□□□ -0.94
TUBA3FP-202ENST00000422086 KTN1-AS1Q86SY8 53 aa9.19□□□□□ -0.94
TUBA3FP-202ENST00000422086 K7ERS5 55 aa9.15□□□□□ -0.94
TUBA3FP-202ENST00000422086 HMCN2Q8NDA2 5059 aa9.15□□□□□ -0.95
TUBA3FP-202ENST00000422086 HERC1Q15751 4861 aa9.14□□□□□ -0.95
TUBA3FP-202ENST00000422086 KRTAP13-4Q3LI77 160 aa9.11□□□□□ -0.95
TUBA3FP-202ENST00000422086 M0QZ58 72 aa9.1□□□□□ -0.95
TUBA3FP-202ENST00000422086 A0A0D9SG42 100 aa8.99□□□□□ -0.97
TUBA3FP-202ENST00000422086 R4GN34 69 aa8.93□□□□□ -0.98
TUBA3FP-202ENST00000422086 FLGP20930 4061 aaPredicted RBP8.93□□□□□ -0.98
TUBA3FP-202ENST00000422086 LCE2CQ5TA81 110 aa8.85□□□□□ -0.99
TUBA3FP-202ENST00000422086 KRTAP12-1P59990 96 aa8.82□□□□□ -1
TUBA3FP-202ENST00000422086 KRTAP12-2P59991 146 aa8.79□□□□□ -1
TUBA3FP-202ENST00000422086 CRIPTQ9P021 101 aa8.79□□□□□ -1
TUBA3FP-202ENST00000422086 MUC2Q02817 5179 aa8.78□□□□□ -1
TUBA3FP-202ENST00000422086 SPINT4Q6UDR6 99 aa8.78□□□□□ -1
TUBA3FP-202ENST00000422086 ROMO1P60602 79 aa8.77□□□□□ -1.01
TUBA3FP-202ENST00000422086 LORP23490 312 aaPredicted RBP8.75□□□□□ -1.01
TUBA3FP-202ENST00000422086 PRAC1Q96KF2 57 aa8.75□□□□□ -1.01
TUBA3FP-202ENST00000422086 LINC01554Q52M75 96 aa8.73□□□□□ -1.01
TUBA3FP-202ENST00000422086 MT1HP80294 61 aa8.68□□□□□ -1.02
TUBA3FP-202ENST00000422086 M0R2T5 61 aa8.67□□□□□ -1.02
TUBA3FP-202ENST00000422086 RNF213Q63HN8 5207 aa8.65□□□□□ -1.03
TUBA3FP-202ENST00000422086 UBR4Q5T4S7 5183 aa8.58□□□□□ -1.04
TUBA3FP-202ENST00000422086 KRTAP25-1Q3LHN0 102 aa8.55□□□□□ -1.04
TUBA3FP-202ENST00000422086 SPRR2GQ9BYE4 73 aa8.46□□□□□ -1.06
TUBA3FP-202ENST00000422086 FAT4Q6V0I7 4981 aa8.43□□□□□ -1.06
TUBA3FP-202ENST00000422086 MT2AP02795 61 aa8.42□□□□□ -1.06
TUBA3FP-202ENST00000422086 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
TUBA3FP-202ENST00000422086 KRTAP9-8Q9BYQ0 159 aa8.39□□□□□ -1.07
TUBA3FP-202ENST00000422086 KRTAP10-10P60014 251 aa8.38□□□□□ -1.07
TUBA3FP-202ENST00000422086 MT1FP04733 61 aa8.36□□□□□ -1.07
TUBA3FP-202ENST00000422086 KRTAP19-1Q8IUB9 90 aa8.35□□□□□ -1.07
TUBA3FP-202ENST00000422086 C10orf95Q9H7T3 257 aa8.31□□□□□ -1.08
TUBA3FP-202ENST00000422086 PLAC4Q8WY50 150 aa8.28□□□□□ -1.08
TUBA3FP-202ENST00000422086 KRTAP19-8Q3LI54 63 aa8.19□□□□□ -1.1
TUBA3FP-202ENST00000422086 LCE2AQ5TA79 106 aaPredicted RBP8.11□□□□□ -1.11
TUBA3FP-202ENST00000422086 KRTAP9-3Q9BYQ3 159 aa8.08□□□□□ -1.12
TUBA3FP-202ENST00000422086 TNP1P09430 55 aa8.08□□□□□ -1.12
TUBA3FP-202ENST00000422086 PP632Q6XCG6 107 aa8.07□□□□□ -1.12
TUBA3FP-202ENST00000422086 MT1BP07438 61 aa8□□□□□ -1.13
TUBA3FP-202ENST00000422086 KRTAP23-1A1A580 65 aa7.98□□□□□ -1.13
TUBA3FP-202ENST00000422086 MT1XP80297 61 aa7.82□□□□□ -1.16
TUBA3FP-202ENST00000422086 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
TUBA3FP-202ENST00000422086 PRO2289Q9P1D8 64 aa7.8□□□□□ -1.16
TUBA3FP-202ENST00000422086 LCE2BO14633 110 aa7.78□□□□□ -1.16
TUBA3FP-202ENST00000422086 KRTAP15-1Q3LI76 137 aa7.62□□□□□ -1.19
TUBA3FP-202ENST00000422086 LCE3AQ5TA76 89 aa7.6□□□□□ -1.19
TUBA3FP-202ENST00000422086 KRTAP10-12P60413 245 aa7.58□□□□□ -1.2
TUBA3FP-202ENST00000422086 LCE2DQ5TA82 110 aaPredicted RBP7.53□□□□□ -1.2
TUBA3FP-202ENST00000422086 KRTAP8-1Q8IUC2 63 aa7.51□□□□□ -1.21
TUBA3FP-202ENST00000422086 KRTAP10-7P60409 375 aaPredicted RBP7.5□□□□□ -1.21
TUBA3FP-202ENST00000422086 USH2AO75445 5202 aa7.37□□□□□ -1.23
TUBA3FP-202ENST00000422086 KRTAP12-3P60328 96 aa7.32□□□□□ -1.24
TUBA3FP-202ENST00000422086 KRTAP19-6Q3LI70 58 aa7.29□□□□□ -1.24
TUBA3FP-202ENST00000422086 SPRR5A0A1B0GTR4 108 aa7.22□□□□□ -1.25
TUBA3FP-202ENST00000422086 SSPOA2VEC9 5147 aa7.2□□□□□ -1.26
TUBA3FP-202ENST00000422086 LUZP6Q538Z0 58 aa7.19□□□□□ -1.26
TUBA3FP-202ENST00000422086 NDUFAF8A1L188 74 aa7.16□□□□□ -1.26
TUBA3FP-202ENST00000422086 KRTAP19-5Q3LI72 72 aa7.13□□□□□ -1.27
TUBA3FP-202ENST00000422086 KRTAP4-8A0A0G2JLE6 195 aa7.08□□□□□ -1.28
TUBA3FP-202ENST00000422086 KRTAP4-8Q9BYQ9 185 aa7.08□□□□□ -1.28
TUBA3FP-202ENST00000422086 KRTAP19-7Q3SYF9 63 aa6.97□□□□□ -1.29
TUBA3FP-202ENST00000422086 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
TUBA3FP-202ENST00000422086 H3BS24 57 aa6.92□□□□□ -1.3
TUBA3FP-202ENST00000422086 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
TUBA3FP-202ENST00000422086 KMT2DO14686 5537 aa6.85□□□□□ -1.31
TUBA3FP-202ENST00000422086 MT1EP04732 61 aa6.84□□□□□ -1.31
TUBA3FP-202ENST00000422086 KRTAP9-2Q9BYQ4 174 aa6.77□□□□□ -1.33
TUBA3FP-202ENST00000422086 MT1LQ93083 61 aa6.75□□□□□ -1.33
TUBA3FP-202ENST00000422086 FSIP2Q5CZC0 6907 aa6.75□□□□□ -1.33
TUBA3FP-202ENST00000422086 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
TUBA3FP-202ENST00000422086 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
TUBA3FP-202ENST00000422086 KRTAP19-3Q7Z4W3 81 aa6.53□□□□□ -1.36
TUBA3FP-202ENST00000422086 MT1GP13640 62 aa6.51□□□□□ -1.37
TUBA3FP-202ENST00000422086 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms