RNA–Protein interactions for RNA: ENST00000420515.1

FAAP20-207, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-207ENST00000420515 KRTAP9-2Q9BYQ4 174 aa12.82□□□□□ -0.36
FAAP20-207ENST00000420515 LCE2DQ5TA82 110 aaPredicted RBP12.78□□□□□ -0.36
FAAP20-207ENST00000420515 CSAG1Q6PB30 78 aa12.78□□□□□ -0.36
FAAP20-207ENST00000420515 ANAPC13Q9BS18 74 aa12.77□□□□□ -0.37
FAAP20-207ENST00000420515 KRTAP10-10P60014 251 aa12.75□□□□□ -0.37
FAAP20-207ENST00000420515 CYSTM1Q9H1C7 97 aa12.72□□□□□ -0.37
FAAP20-207ENST00000420515 NDUFC1O43677 76 aa12.67□□□□□ -0.38
FAAP20-207ENST00000420515 SPANXA2-OT1Q8N9U9 137 aa12.63□□□□□ -0.39
FAAP20-207ENST00000420515 KRTAP9-3Q9BYQ3 159 aa12.62□□□□□ -0.39
FAAP20-207ENST00000420515 ACYP2P14621 99 aa12.6□□□□□ -0.39
FAAP20-207ENST00000420515 CCDC179H3BU77 68 aa12.57□□□□□ -0.4
FAAP20-207ENST00000420515 H7BZZ5 65 aa12.57□□□□□ -0.4
FAAP20-207ENST00000420515 LCE2BO14633 110 aa12.46□□□□□ -0.42
FAAP20-207ENST00000420515 FSIP2Q5CZC0 6907 aa12.45□□□□□ -0.42
FAAP20-207ENST00000420515 USH2AO75445 5202 aa12.42□□□□□ -0.42
FAAP20-207ENST00000420515 H0YAA0 97 aa12.39□□□□□ -0.43
FAAP20-207ENST00000420515 CHKB-CPT1BH3BT56 60 aa12.37□□□□□ -0.43
FAAP20-207ENST00000420515 ADM2Q7Z4H4 148 aa12.35□□□□□ -0.43
FAAP20-207ENST00000420515 COA5Q86WW8 74 aa12.31□□□□□ -0.44
FAAP20-207ENST00000420515 KRTAP19-1Q8IUB9 90 aa12.31□□□□□ -0.44
FAAP20-207ENST00000420515 SPTSSBQ8NFR3 76 aa12.24□□□□□ -0.45
FAAP20-207ENST00000420515 KRTAP3-2Q9BYR7 98 aa12.22□□□□□ -0.45
FAAP20-207ENST00000420515 P0C880 135 aa12.21□□□□□ -0.45
FAAP20-207ENST00000420515 SSPOA2VEC9 5147 aa12.19□□□□□ -0.46
FAAP20-207ENST00000420515 SPRR2GQ9BYE4 73 aa12.19□□□□□ -0.46
FAAP20-207ENST00000420515 CRCT1Q9UGL9 99 aa12.19□□□□□ -0.46
FAAP20-207ENST00000420515 KRTAP9-6A0A140TA67 174 aa12.13□□□□□ -0.47
FAAP20-207ENST00000420515 CRIPTQ9P021 101 aa12.12□□□□□ -0.47
FAAP20-207ENST00000420515 ATP5EP56381 51 aaPredicted RBP12.04□□□□□ -0.48
FAAP20-207ENST00000420515 TMEM258P61165 79 aa12.02□□□□□ -0.48
FAAP20-207ENST00000420515 KRTAP19-8Q3LI54 63 aa12.01□□□□□ -0.49
FAAP20-207ENST00000420515 MT1BP07438 61 aa11.99□□□□□ -0.49
FAAP20-207ENST00000420515 R4GN34 69 aa11.93□□□□□ -0.5
FAAP20-207ENST00000420515 Q5VV11 94 aa11.92□□□□□ -0.5
FAAP20-207ENST00000420515 M0QZ58 72 aa11.91□□□□□ -0.5
FAAP20-207ENST00000420515 PCP4P48539 62 aa11.83□□□□□ -0.52
FAAP20-207ENST00000420515 KRTAP19-6Q3LI70 58 aa11.83□□□□□ -0.52
FAAP20-207ENST00000420515 FCGBPQ9Y6R7 5405 aaPredicted RBP11.77□□□□□ -0.53
FAAP20-207ENST00000420515 SEC61GP60059 68 aa11.72□□□□□ -0.53
FAAP20-207ENST00000420515 KRTAP13-4Q3LI77 160 aa11.72□□□□□ -0.53
FAAP20-207ENST00000420515 LINC01554Q52M75 96 aa11.72□□□□□ -0.53
FAAP20-207ENST00000420515 SERP1Q9Y6X1 66 aa11.7□□□□□ -0.54
FAAP20-207ENST00000420515 A0A1B0GU69 56 aa11.61□□□□□ -0.55
FAAP20-207ENST00000420515 A0A1B0GU33 70 aa11.54□□□□□ -0.56
FAAP20-207ENST00000420515 PLAC4Q8WY50 150 aa11.53□□□□□ -0.56
FAAP20-207ENST00000420515 LINC01558Q9Y6Z2 57 aa11.53□□□□□ -0.56
FAAP20-207ENST00000420515 KRTAP10-5P60370 271 aa11.52□□□□□ -0.57
FAAP20-207ENST00000420515 A6NN06 94 aa11.5□□□□□ -0.57
FAAP20-207ENST00000420515 SPATA8Q6RVD6 105 aa11.5□□□□□ -0.57
FAAP20-207ENST00000420515 MT1XP80297 61 aa11.4□□□□□ -0.59
FAAP20-207ENST00000420515 PRR15LQ9BU68 103 aa11.38□□□□□ -0.59
FAAP20-207ENST00000420515 A0A0D9SG42 100 aa11.36□□□□□ -0.59
FAAP20-207ENST00000420515 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.35□□□□□ -0.59
FAAP20-207ENST00000420515 MACF1Q9UPN3 7388 aaKnown RBP11.29□□□□□ -0.6
FAAP20-207ENST00000420515 A8MU10 97 aa11.24□□□□□ -0.61
FAAP20-207ENST00000420515 PRO2289Q9P1D8 64 aa11.23□□□□□ -0.61
FAAP20-207ENST00000420515 Q1T7F1 81 aa11.21□□□□□ -0.61
FAAP20-207ENST00000420515 SMIM26A0A096LP01 95 aa11.19□□□□□ -0.62
FAAP20-207ENST00000420515 RPS28P62857 69 aaKnown RBP11.19□□□□□ -0.62
FAAP20-207ENST00000420515 KRTAP12-1P59990 96 aa11.16□□□□□ -0.62
FAAP20-207ENST00000420515 V9GYY9 64 aa11.16□□□□□ -0.62
FAAP20-207ENST00000420515 PSPHP1O15172 72 aa11.14□□□□□ -0.63
FAAP20-207ENST00000420515 SPINT4Q6UDR6 99 aa11.13□□□□□ -0.63
FAAP20-207ENST00000420515 KRTAP12-2P59991 146 aa11.11□□□□□ -0.63
FAAP20-207ENST00000420515 SYNE2Q8WXH0 6885 aaKnown RBP11.07□□□□□ -0.64
FAAP20-207ENST00000420515 UQCR11O14957 56 aa11.07□□□□□ -0.64
FAAP20-207ENST00000420515 CAMK2N1Q7Z7J9 78 aa11.06□□□□□ -0.64
FAAP20-207ENST00000420515 KRTAP9-7A8MTY7 169 aa10.99□□□□□ -0.65
FAAP20-207ENST00000420515 KMT2DO14686 5537 aa10.96□□□□□ -0.66
FAAP20-207ENST00000420515 KRTAP10-7P60409 375 aaPredicted RBP10.93□□□□□ -0.66
FAAP20-207ENST00000420515 MIR22HGQ0VDD5 57 aa10.91□□□□□ -0.66
FAAP20-207ENST00000420515 KRTAP10-12P60413 245 aa10.79□□□□□ -0.68
FAAP20-207ENST00000420515 KRTAP6-3Q3LI67 103 aa10.77□□□□□ -0.69
FAAP20-207ENST00000420515 KRTAP4-8A0A0G2JLE6 195 aa10.74□□□□□ -0.69
FAAP20-207ENST00000420515 A6NED7 52 aa10.74□□□□□ -0.69
FAAP20-207ENST00000420515 KRTAP4-8Q9BYQ9 185 aa10.74□□□□□ -0.69
FAAP20-207ENST00000420515 C10orf95Q9H7T3 257 aa10.63□□□□□ -0.71
FAAP20-207ENST00000420515 KRTAP8-1Q8IUC2 63 aa10.59□□□□□ -0.71
FAAP20-207ENST00000420515 KRTAP5-9P26371 169 aa10.58□□□□□ -0.72
FAAP20-207ENST00000420515 MUC12Q9UKN1 5478 aa10.55□□□□□ -0.72
FAAP20-207ENST00000420515 K7ERS5 55 aa10.46□□□□□ -0.74
FAAP20-207ENST00000420515 SPRR2FQ96RM1 72 aa10.45□□□□□ -0.74
FAAP20-207ENST00000420515 CDC42SE1Q9NRR8 79 aa10.42□□□□□ -0.74
FAAP20-207ENST00000420515 TNP1P09430 55 aa10.36□□□□□ -0.75
FAAP20-207ENST00000420515 MDN1Q9NU22 5596 aa10.34□□□□□ -0.75
FAAP20-207ENST00000420515 NEBP20929 6669 aa10.24□□□□□ -0.77
FAAP20-207ENST00000420515 LCE3AQ5TA76 89 aa10.2□□□□□ -0.78
FAAP20-207ENST00000420515 KRTAP19-7Q3SYF9 63 aa10.19□□□□□ -0.78
FAAP20-207ENST00000420515 SPRR2EP22531 72 aa10.13□□□□□ -0.79
FAAP20-207ENST00000420515 SPRR2BP35325 72 aa10.13□□□□□ -0.79
FAAP20-207ENST00000420515 SPRR2AP35326 72 aa10.13□□□□□ -0.79
FAAP20-207ENST00000420515 LCE1AQ5T7P2 110 aa10.11□□□□□ -0.79
FAAP20-207ENST00000420515 KRTAP19-5Q3LI72 72 aa10.09□□□□□ -0.79
FAAP20-207ENST00000420515 KRTAP25-1Q3LHN0 102 aa10.08□□□□□ -0.8
FAAP20-207ENST00000420515 MT1EP04732 61 aa10.04□□□□□ -0.8
FAAP20-207ENST00000420515 BRK1Q8WUW1 75 aa10□□□□□ -0.81
FAAP20-207ENST00000420515 ROMO1P60602 79 aa9.98□□□□□ -0.81
FAAP20-207ENST00000420515 KRTAP19-3Q7Z4W3 81 aa9.79□□□□□ -0.84
FAAP20-207ENST00000420515 SPRR2DP22532 72 aa9.77□□□□□ -0.85
FAAP20-207ENST00000420515 KRTAP12-3P60328 96 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms