RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 CSAG1Q6PB30 78 aa9.55□□□□□ -0.88
EGFR-204ENST00000420316 DMAC1Q96GE9 116 aa9.52□□□□□ -0.89
EGFR-204ENST00000420316 COX7CP15954 63 aa9.51□□□□□ -0.89
EGFR-204ENST00000420316 KRTAP9-3Q9BYQ3 159 aa9.49□□□□□ -0.89
EGFR-204ENST00000420316 NDUFC1O43677 76 aa9.46□□□□□ -0.89
EGFR-204ENST00000420316 ANAPC13Q9BS18 74 aa9.46□□□□□ -0.9
EGFR-204ENST00000420316 FSIP2Q5CZC0 6907 aa9.45□□□□□ -0.9
EGFR-204ENST00000420316 CYSTM1Q9H1C7 97 aa9.41□□□□□ -0.9
EGFR-204ENST00000420316 ACYP2P14621 99 aa9.37□□□□□ -0.91
EGFR-204ENST00000420316 KRTAP9-6A0A140TA67 174 aa9.37□□□□□ -0.91
EGFR-204ENST00000420316 CRCT1Q9UGL9 99 aa9.37□□□□□ -0.91
EGFR-204ENST00000420316 USH2AO75445 5202 aa9.36□□□□□ -0.91
EGFR-204ENST00000420316 LCE2BO14633 110 aa9.34□□□□□ -0.91
EGFR-204ENST00000420316 SPANXA2-OT1Q8N9U9 137 aa9.34□□□□□ -0.91
EGFR-204ENST00000420316 CCDC179H3BU77 68 aa9.31□□□□□ -0.92
EGFR-204ENST00000420316 H7BZZ5 65 aa9.28□□□□□ -0.92
EGFR-204ENST00000420316 H0YAA0 97 aa9.24□□□□□ -0.93
EGFR-204ENST00000420316 CHKB-CPT1BH3BT56 60 aa9.24□□□□□ -0.93
EGFR-204ENST00000420316 ADM2Q7Z4H4 148 aa9.24□□□□□ -0.93
EGFR-204ENST00000420316 SSPOA2VEC9 5147 aa9.18□□□□□ -0.94
EGFR-204ENST00000420316 KRTAP19-1Q8IUB9 90 aa9.18□□□□□ -0.94
EGFR-204ENST00000420316 COA5Q86WW8 74 aa9.15□□□□□ -0.95
EGFR-204ENST00000420316 CRIPTQ9P021 101 aa9.13□□□□□ -0.95
EGFR-204ENST00000420316 P0C880 135 aa9.12□□□□□ -0.95
EGFR-204ENST00000420316 SPTSSBQ8NFR3 76 aa9.12□□□□□ -0.95
EGFR-204ENST00000420316 SPRR2GQ9BYE4 73 aa9.12□□□□□ -0.95
EGFR-204ENST00000420316 KRTAP3-2Q9BYR7 98 aa9.09□□□□□ -0.95
EGFR-204ENST00000420316 KRTAP19-8Q3LI54 63 aa9□□□□□ -0.97
EGFR-204ENST00000420316 KRTAP19-6Q3LI70 58 aa8.97□□□□□ -0.97
EGFR-204ENST00000420316 MT1BP07438 61 aa8.95□□□□□ -0.98
EGFR-204ENST00000420316 Q5VV11 94 aa8.95□□□□□ -0.98
EGFR-204ENST00000420316 FCGBPQ9Y6R7 5405 aaPredicted RBP8.94□□□□□ -0.98
EGFR-204ENST00000420316 R4GN34 69 aa8.92□□□□□ -0.98
EGFR-204ENST00000420316 M0QZ58 72 aa8.9□□□□□ -0.98
EGFR-204ENST00000420316 ATP5EP56381 51 aaPredicted RBP8.88□□□□□ -0.99
EGFR-204ENST00000420316 TMEM258P61165 79 aa8.86□□□□□ -0.99
EGFR-204ENST00000420316 LINC01554Q52M75 96 aa8.81□□□□□ -1
EGFR-204ENST00000420316 SEC61GP60059 68 aa8.74□□□□□ -1.01
EGFR-204ENST00000420316 KRTAP13-4Q3LI77 160 aa8.73□□□□□ -1.01
EGFR-204ENST00000420316 SERP1Q9Y6X1 66 aa8.73□□□□□ -1.01
EGFR-204ENST00000420316 PCP4P48539 62 aa8.71□□□□□ -1.02
EGFR-204ENST00000420316 A6NN06 94 aa8.69□□□□□ -1.02
EGFR-204ENST00000420316 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.69□□□□□ -1.02
EGFR-204ENST00000420316 KRTAP10-5P60370 271 aa8.66□□□□□ -1.02
EGFR-204ENST00000420316 A0A1B0GU69 56 aa8.65□□□□□ -1.03
EGFR-204ENST00000420316 PLAC4Q8WY50 150 aa8.65□□□□□ -1.03
EGFR-204ENST00000420316 A0A1B0GU33 70 aa8.59□□□□□ -1.03
EGFR-204ENST00000420316 SPATA8Q6RVD6 105 aa8.59□□□□□ -1.03
EGFR-204ENST00000420316 MACF1Q9UPN3 7388 aaKnown RBP8.58□□□□□ -1.04
EGFR-204ENST00000420316 LINC01558Q9Y6Z2 57 aa8.53□□□□□ -1.04
EGFR-204ENST00000420316 A0A0D9SG42 100 aa8.52□□□□□ -1.05
EGFR-204ENST00000420316 MT1XP80297 61 aa8.51□□□□□ -1.05
EGFR-204ENST00000420316 PRO2289Q9P1D8 64 aa8.5□□□□□ -1.05
EGFR-204ENST00000420316 KRTAP9-7A8MTY7 169 aa8.47□□□□□ -1.05
EGFR-204ENST00000420316 PRR15LQ9BU68 103 aa8.45□□□□□ -1.06
EGFR-204ENST00000420316 SYNE2Q8WXH0 6885 aaKnown RBP8.4□□□□□ -1.06
EGFR-204ENST00000420316 A8MU10 97 aa8.39□□□□□ -1.07
EGFR-204ENST00000420316 SPINT4Q6UDR6 99 aa8.34□□□□□ -1.07
EGFR-204ENST00000420316 SMIM26A0A096LP01 95 aa8.3□□□□□ -1.08
EGFR-204ENST00000420316 KRTAP12-1P59990 96 aa8.3□□□□□ -1.08
EGFR-204ENST00000420316 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
EGFR-204ENST00000420316 PSPHP1O15172 72 aa8.28□□□□□ -1.08
EGFR-204ENST00000420316 KRTAP12-2P59991 146 aa8.27□□□□□ -1.09
EGFR-204ENST00000420316 KRTAP6-3Q3LI67 103 aa8.27□□□□□ -1.09
EGFR-204ENST00000420316 Q1T7F1 81 aa8.27□□□□□ -1.09
EGFR-204ENST00000420316 V9GYY9 64 aa8.24□□□□□ -1.09
EGFR-204ENST00000420316 UQCR11O14957 56 aa8.22□□□□□ -1.09
EGFR-204ENST00000420316 RPS28P62857 69 aaKnown RBP8.22□□□□□ -1.09
EGFR-204ENST00000420316 KRTAP10-7P60409 375 aaPredicted RBP8.17□□□□□ -1.1
EGFR-204ENST00000420316 KMT2DO14686 5537 aa8.16□□□□□ -1.1
EGFR-204ENST00000420316 MIR22HGQ0VDD5 57 aa8.1□□□□□ -1.11
EGFR-204ENST00000420316 KRTAP5-9P26371 169 aa8.06□□□□□ -1.12
EGFR-204ENST00000420316 KRTAP10-12P60413 245 aa8.06□□□□□ -1.12
EGFR-204ENST00000420316 KRTAP4-8A0A0G2JLE6 195 aa8.05□□□□□ -1.12
EGFR-204ENST00000420316 KRTAP4-8Q9BYQ9 185 aa8.05□□□□□ -1.12
EGFR-204ENST00000420316 MUC12Q9UKN1 5478 aa7.99□□□□□ -1.13
EGFR-204ENST00000420316 A6NED7 52 aa7.98□□□□□ -1.13
EGFR-204ENST00000420316 KRTAP8-1Q8IUC2 63 aa7.98□□□□□ -1.13
EGFR-204ENST00000420316 LOC100996750A0A140TA64 210 aa7.92□□□□□ -1.14
EGFR-204ENST00000420316 KRTAP4-6Q9BYQ5 205 aa7.92□□□□□ -1.14
EGFR-204ENST00000420316 C10orf95Q9H7T3 257 aa7.92□□□□□ -1.14
EGFR-204ENST00000420316 SPRR2FQ96RM1 72 aa7.88□□□□□ -1.15
EGFR-204ENST00000420316 MDN1Q9NU22 5596 aa7.86□□□□□ -1.15
EGFR-204ENST00000420316 NEBP20929 6669 aa7.86□□□□□ -1.15
EGFR-204ENST00000420316 K7ERS5 55 aa7.8□□□□□ -1.16
EGFR-204ENST00000420316 TNP1P09430 55 aa7.73□□□□□ -1.17
EGFR-204ENST00000420316 CDC42SE1Q9NRR8 79 aa7.68□□□□□ -1.18
EGFR-204ENST00000420316 SPRR2EP22531 72 aa7.67□□□□□ -1.18
EGFR-204ENST00000420316 SPRR2BP35325 72 aa7.67□□□□□ -1.18
EGFR-204ENST00000420316 SPRR2AP35326 72 aa7.67□□□□□ -1.18
EGFR-204ENST00000420316 LCE1AQ5T7P2 110 aa7.64□□□□□ -1.19
EGFR-204ENST00000420316 LCE3AQ5TA76 89 aa7.62□□□□□ -1.19
EGFR-204ENST00000420316 KRTAP19-7Q3SYF9 63 aa7.59□□□□□ -1.19
EGFR-204ENST00000420316 KRTAP19-5Q3LI72 72 aa7.55□□□□□ -1.2
EGFR-204ENST00000420316 MT1EP04732 61 aa7.5□□□□□ -1.21
EGFR-204ENST00000420316 KRTAP25-1Q3LHN0 102 aa7.49□□□□□ -1.21
EGFR-204ENST00000420316 KRTAP20-1Q3LI63 56 aa7.46□□□□□ -1.22
EGFR-204ENST00000420316 SPRR2DP22532 72 aa7.41□□□□□ -1.22
EGFR-204ENST00000420316 ROMO1P60602 79 aa7.41□□□□□ -1.22
EGFR-204ENST00000420316 BRK1Q8WUW1 75 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms