RNA–Protein interactions for RNA: ENST00000417665.5

NPHP1-204, Transcript of nephrocystin 1, humanhuman

TSL 5 BASIC

Gene NPHP1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-204ENST00000417665 Q6ZSA8 131 aa3.36□□□□□ -1.87
NPHP1-204ENST00000417665 SRRM2Q9UQ35 2752 aaKnown RBP3.36□□□□□ -1.87
NPHP1-204ENST00000417665 DNAH5Q8TE73 4624 aa3.34□□□□□ -1.87
NPHP1-204ENST00000417665 A0A1B0GU33 70 aa3.34□□□□□ -1.88
NPHP1-204ENST00000417665 MYCBP2O75592 4640 aa3.33□□□□□ -1.88
NPHP1-204ENST00000417665 SPINK1P00995 79 aa3.33□□□□□ -1.88
NPHP1-204ENST00000417665 KRTAP1-5Q9BYS1 174 aa3.33□□□□□ -1.88
NPHP1-204ENST00000417665 KRTAP16-1A8MUX0 517 aa3.32□□□□□ -1.88
NPHP1-204ENST00000417665 SSBP3-AS1Q7Z2R9 100 aa3.32□□□□□ -1.88
NPHP1-204ENST00000417665 CIRBP-AS1Q8TBR5 109 aa3.32□□□□□ -1.88
NPHP1-204ENST00000417665 SPACA4Q8TDM5 124 aa3.32□□□□□ -1.88
NPHP1-204ENST00000417665 ANAPC11Q9NYG5 84 aa3.32□□□□□ -1.88
NPHP1-204ENST00000417665 VPS13BQ7Z7G8 4022 aa3.31□□□□□ -1.88
NPHP1-204ENST00000417665 H1FX-AS1Q4G0G2 97 aa3.31□□□□□ -1.88
NPHP1-204ENST00000417665 SPINT4Q6UDR6 99 aa3.31□□□□□ -1.88
NPHP1-204ENST00000417665 PSORS1C2Q9UIG4 136 aa3.31□□□□□ -1.88
NPHP1-204ENST00000417665 UBE2DNLQ8IWF7 75 aa3.31□□□□□ -1.88
NPHP1-204ENST00000417665 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
NPHP1-204ENST00000417665 Q5VSD8 79 aa3.3□□□□□ -1.88
NPHP1-204ENST00000417665 FAT1Q14517 4588 aa3.3□□□□□ -1.88
NPHP1-204ENST00000417665 KRTAP10-2P60368 255 aa3.29□□□□□ -1.88
NPHP1-204ENST00000417665 C20orf166-AS1Q96NR2 134 aa3.29□□□□□ -1.88
NPHP1-204ENST00000417665 A0A087WTM6 91 aa3.28□□□□□ -1.88
NPHP1-204ENST00000417665 NBDYA0A0U1RRE5 68 aa3.28□□□□□ -1.88
NPHP1-204ENST00000417665 CRIPTQ9P021 101 aa3.28□□□□□ -1.88
NPHP1-204ENST00000417665 KRTAP23-1A1A580 65 aa3.28□□□□□ -1.88
NPHP1-204ENST00000417665 HMCN2Q8NDA2 5059 aa3.28□□□□□ -1.89
NPHP1-204ENST00000417665 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
NPHP1-204ENST00000417665 TYMSOSQ8TAI1 123 aa3.27□□□□□ -1.89
NPHP1-204ENST00000417665 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
NPHP1-204ENST00000417665 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
NPHP1-204ENST00000417665 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
NPHP1-204ENST00000417665 SMR3BP02814 79 aaPredicted RBP3.23□□□□□ -1.89
NPHP1-204ENST00000417665 KRTAP10-1P60331 282 aa3.23□□□□□ -1.89
NPHP1-204ENST00000417665 DNAH8Q96JB1 4490 aa3.22□□□□□ -1.89
NPHP1-204ENST00000417665 Q6ZRN7 208 aaPredicted RBP3.21□□□□□ -1.89
NPHP1-204ENST00000417665 TPRXLQ17RH7 258 aa3.21□□□□□ -1.9
NPHP1-204ENST00000417665 RPL37P61927 97 aaKnown RBP3.2□□□□□ -1.9
NPHP1-204ENST00000417665 COX6B2Q6YFQ2 88 aa3.2□□□□□ -1.9
NPHP1-204ENST00000417665 LRP1Q07954 4544 aaKnown RBP3.18□□□□□ -1.9
NPHP1-204ENST00000417665 RNF213Q63HN8 5207 aa3.18□□□□□ -1.9
NPHP1-204ENST00000417665 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
NPHP1-204ENST00000417665 KRTAP13-2Q52LG2 175 aa3.16□□□□□ -1.9
NPHP1-204ENST00000417665 PKHD1L1Q86WI1 4243 aa3.15□□□□□ -1.9
NPHP1-204ENST00000417665 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.9
NPHP1-204ENST00000417665 KRTAP4-9Q9BYQ8 210 aa3.15□□□□□ -1.9
NPHP1-204ENST00000417665 FAT3Q8TDW7 4589 aa3.15□□□□□ -1.91
NPHP1-204ENST00000417665 KRTAP3-1Q9BYR8 98 aa3.15□□□□□ -1.91
NPHP1-204ENST00000417665 LCE1DQ5T752 114 aa3.14□□□□□ -1.91
NPHP1-204ENST00000417665 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
NPHP1-204ENST00000417665 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
NPHP1-204ENST00000417665 LRP2P98164 4655 aa3.13□□□□□ -1.91
NPHP1-204ENST00000417665 MT1HL1P0DM35 61 aa3.11□□□□□ -1.91
NPHP1-204ENST00000417665 TNXBP22105 4242 aa3.1□□□□□ -1.91
NPHP1-204ENST00000417665 A0A0D9SG42 100 aa3.09□□□□□ -1.91
NPHP1-204ENST00000417665 KRTAP10-6P60371 365 aaPredicted RBP3.08□□□□□ -1.92
NPHP1-204ENST00000417665 RPS29P62273 56 aaKnown RBP3.08□□□□□ -1.92
NPHP1-204ENST00000417665 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
NPHP1-204ENST00000417665 KRTAP13-4Q3LI77 160 aa3.07□□□□□ -1.92
NPHP1-204ENST00000417665 S4R3F8 94 aa3.07□□□□□ -1.92
NPHP1-204ENST00000417665 KRTAP1-4P0C5Y4 121 aa3.07□□□□□ -1.92
NPHP1-204ENST00000417665 SEC61BP60468 96 aaKnown RBP3.02□□□□□ -1.93
NPHP1-204ENST00000417665 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
NPHP1-204ENST00000417665 FAT4Q6V0I7 4981 aa3.01□□□□□ -1.93
NPHP1-204ENST00000417665 C9orf92A6NGG3 77 aa3.01□□□□□ -1.93
NPHP1-204ENST00000417665 KRTAP19-4Q3LI73 84 aa3□□□□□ -1.93
NPHP1-204ENST00000417665 KRTAP12-1P59990 96 aa2.99□□□□□ -1.93
NPHP1-204ENST00000417665 PLAC4Q8WY50 150 aa2.98□□□□□ -1.93
NPHP1-204ENST00000417665 KRTAP10-8P60410 259 aa2.96□□□□□ -1.94
NPHP1-204ENST00000417665 LPAP08519 4548 aa2.95□□□□□ -1.94
NPHP1-204ENST00000417665 MUC2Q02817 5179 aa2.94□□□□□ -1.94
NPHP1-204ENST00000417665 M0QZ58 72 aa2.93□□□□□ -1.94
NPHP1-204ENST00000417665 CRCT1Q9UGL9 99 aa2.93□□□□□ -1.94
NPHP1-204ENST00000417665 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
NPHP1-204ENST00000417665 LCE4AQ5TA78 99 aa2.86□□□□□ -1.95
NPHP1-204ENST00000417665 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
NPHP1-204ENST00000417665 KRTAP19-1Q8IUB9 90 aa2.85□□□□□ -1.95
NPHP1-204ENST00000417665 FSIP2Q5CZC0 6907 aa2.85□□□□□ -1.95
NPHP1-204ENST00000417665 PP632Q6XCG6 107 aa2.85□□□□□ -1.95
NPHP1-204ENST00000417665 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
NPHP1-204ENST00000417665 MUC17Q685J3 4493 aa2.78□□□□□ -1.96
NPHP1-204ENST00000417665 PRO2289Q9P1D8 64 aa2.77□□□□□ -1.97
NPHP1-204ENST00000417665 R4GN34 69 aa2.77□□□□□ -1.97
NPHP1-204ENST00000417665 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
NPHP1-204ENST00000417665 KRTAP4-1Q9BYQ7 146 aa2.7□□□□□ -1.98
NPHP1-204ENST00000417665 INE1O15225 51 aa2.69□□□□□ -1.98
NPHP1-204ENST00000417665 KRTAP9-3Q9BYQ3 159 aa2.67□□□□□ -1.98
NPHP1-204ENST00000417665 MT1HP80294 61 aa2.66□□□□□ -1.98
NPHP1-204ENST00000417665 KRTAP19-2Q3LHN2 52 aa2.66□□□□□ -1.98
NPHP1-204ENST00000417665 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.98
NPHP1-204ENST00000417665 TNP1P09430 55 aa2.62□□□□□ -1.99
NPHP1-204ENST00000417665 FCGBPQ9Y6R7 5405 aaPredicted RBP2.58□□□□□ -2
NPHP1-204ENST00000417665 SSPOA2VEC9 5147 aa2.58□□□□□ -2
NPHP1-204ENST00000417665 USH2AO75445 5202 aa2.56□□□□□ -2
NPHP1-204ENST00000417665 LCE5AQ5TCM9 118 aa2.56□□□□□ -2
NPHP1-204ENST00000417665 M0R2T5 61 aa2.54□□□□□ -2
NPHP1-204ENST00000417665 FLGP20930 4061 aaPredicted RBP2.54□□□□□ -2
NPHP1-204ENST00000417665 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
NPHP1-204ENST00000417665 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
NPHP1-204ENST00000417665 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms