RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 LCA10Q71F78 164 aa6.28□□□□□ -1.4
SEC22C-205ENST00000417572 SPANXA2-OT1Q8N9U9 137 aa6.28□□□□□ -1.4
SEC22C-205ENST00000417572 H7BZZ5 65 aa6.27□□□□□ -1.41
SEC22C-205ENST00000417572 KRTAP10-6P60371 365 aaPredicted RBP6.27□□□□□ -1.41
SEC22C-205ENST00000417572 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
SEC22C-205ENST00000417572 ACYP2P14621 99 aa6.24□□□□□ -1.41
SEC22C-205ENST00000417572 LCE2BO14633 110 aa6.21□□□□□ -1.42
SEC22C-205ENST00000417572 CSAG1Q6PB30 78 aa6.21□□□□□ -1.42
SEC22C-205ENST00000417572 KRTAP9-8Q9BYQ0 159 aa6.18□□□□□ -1.42
SEC22C-205ENST00000417572 MT2AP02795 61 aa6.13□□□□□ -1.43
SEC22C-205ENST00000417572 SVIPQ8NHG7 77 aa6.13□□□□□ -1.43
SEC22C-205ENST00000417572 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
SEC22C-205ENST00000417572 CHKB-CPT1BH3BT56 60 aa6.12□□□□□ -1.43
SEC22C-205ENST00000417572 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
SEC22C-205ENST00000417572 COA5Q86WW8 74 aa6.09□□□□□ -1.43
SEC22C-205ENST00000417572 MT1FP04733 61 aa6.09□□□□□ -1.44
SEC22C-205ENST00000417572 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
SEC22C-205ENST00000417572 TMEM258P61165 79 aa6.07□□□□□ -1.44
SEC22C-205ENST00000417572 ATP5EP56381 51 aaPredicted RBP6.06□□□□□ -1.44
SEC22C-205ENST00000417572 SPTSSBQ8NFR3 76 aa6.06□□□□□ -1.44
SEC22C-205ENST00000417572 H0YAA0 97 aa6.02□□□□□ -1.45
SEC22C-205ENST00000417572 ADM2Q7Z4H4 148 aa5.99□□□□□ -1.45
SEC22C-205ENST00000417572 KRTAP9-3Q9BYQ3 159 aa5.97□□□□□ -1.45
SEC22C-205ENST00000417572 P0C880 135 aa5.92□□□□□ -1.46
SEC22C-205ENST00000417572 KRTAP9-2Q9BYQ4 174 aa5.9□□□□□ -1.46
SEC22C-205ENST00000417572 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
SEC22C-205ENST00000417572 CRIPTQ9P021 101 aa5.87□□□□□ -1.47
SEC22C-205ENST00000417572 KRTAP19-1Q8IUB9 90 aa5.86□□□□□ -1.47
SEC22C-205ENST00000417572 SPRR2GQ9BYE4 73 aa5.84□□□□□ -1.48
SEC22C-205ENST00000417572 SEC61GP60059 68 aa5.83□□□□□ -1.48
SEC22C-205ENST00000417572 R4GN34 69 aa5.79□□□□□ -1.48
SEC22C-205ENST00000417572 A0A1B0GU69 56 aa5.77□□□□□ -1.49
SEC22C-205ENST00000417572 M0QZ58 72 aa5.77□□□□□ -1.49
SEC22C-205ENST00000417572 LINC01558Q9Y6Z2 57 aa5.76□□□□□ -1.49
SEC22C-205ENST00000417572 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
SEC22C-205ENST00000417572 KRTAP19-8Q3LI54 63 aa5.74□□□□□ -1.49
SEC22C-205ENST00000417572 USH2AO75445 5202 aa5.73□□□□□ -1.49
SEC22C-205ENST00000417572 A0A1B0GU33 70 aa5.7□□□□□ -1.5
SEC22C-205ENST00000417572 KRTAP13-4Q3LI77 160 aa5.7□□□□□ -1.5
SEC22C-205ENST00000417572 FSIP2Q5CZC0 6907 aa5.69□□□□□ -1.5
SEC22C-205ENST00000417572 SMIM26A0A096LP01 95 aa5.69□□□□□ -1.5
SEC22C-205ENST00000417572 MT1BP07438 61 aa5.69□□□□□ -1.5
SEC22C-205ENST00000417572 Q5VV11 94 aa5.69□□□□□ -1.5
SEC22C-205ENST00000417572 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
SEC22C-205ENST00000417572 LINC01554Q52M75 96 aa5.69□□□□□ -1.5
SEC22C-205ENST00000417572 Q1T7F1 81 aa5.66□□□□□ -1.5
SEC22C-205ENST00000417572 V9GYY9 64 aa5.65□□□□□ -1.5
SEC22C-205ENST00000417572 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
SEC22C-205ENST00000417572 CRCT1Q9UGL9 99 aa5.64□□□□□ -1.51
SEC22C-205ENST00000417572 PSPHP1O15172 72 aa5.59□□□□□ -1.51
SEC22C-205ENST00000417572 PLAC4Q8WY50 150 aa5.58□□□□□ -1.52
SEC22C-205ENST00000417572 SSPOA2VEC9 5147 aa5.58□□□□□ -1.52
SEC22C-205ENST00000417572 A0A0D9SG42 100 aa5.57□□□□□ -1.52
SEC22C-205ENST00000417572 KRTAP19-6Q3LI70 58 aa5.57□□□□□ -1.52
SEC22C-205ENST00000417572 KRTAP9-6A0A140TA67 174 aa5.56□□□□□ -1.52
SEC22C-205ENST00000417572 A6NN06 94 aa5.54□□□□□ -1.52
SEC22C-205ENST00000417572 UQCR11O14957 56 aa5.53□□□□□ -1.52
SEC22C-205ENST00000417572 A8MU10 97 aa5.51□□□□□ -1.53
SEC22C-205ENST00000417572 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
SEC22C-205ENST00000417572 SPINT4Q6UDR6 99 aa5.46□□□□□ -1.54
SEC22C-205ENST00000417572 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
SEC22C-205ENST00000417572 MIR22HGQ0VDD5 57 aa5.45□□□□□ -1.54
SEC22C-205ENST00000417572 MT1XP80297 61 aa5.43□□□□□ -1.54
SEC22C-205ENST00000417572 KRTAP12-2P59991 146 aa5.43□□□□□ -1.54
SEC22C-205ENST00000417572 FCGBPQ9Y6R7 5405 aaPredicted RBP5.42□□□□□ -1.54
SEC22C-205ENST00000417572 A6NED7 52 aa5.41□□□□□ -1.54
SEC22C-205ENST00000417572 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
SEC22C-205ENST00000417572 CAMK2N1Q7Z7J9 78 aa5.38□□□□□ -1.55
SEC22C-205ENST00000417572 KRTAP4-8Q9BYQ9 185 aa5.34□□□□□ -1.55
SEC22C-205ENST00000417572 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
SEC22C-205ENST00000417572 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.26□□□□□ -1.57
SEC22C-205ENST00000417572 CDC42SE1Q9NRR8 79 aa5.26□□□□□ -1.57
SEC22C-205ENST00000417572 K7ERS5 55 aa5.25□□□□□ -1.57
SEC22C-205ENST00000417572 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
SEC22C-205ENST00000417572 MACF1Q9UPN3 7388 aaKnown RBP5.2□□□□□ -1.58
SEC22C-205ENST00000417572 C10orf95Q9H7T3 257 aa5.19□□□□□ -1.58
SEC22C-205ENST00000417572 BRK1Q8WUW1 75 aa5.17□□□□□ -1.58
SEC22C-205ENST00000417572 KRTAP10-12P60413 245 aa5.16□□□□□ -1.58
SEC22C-205ENST00000417572 SYNE2Q8WXH0 6885 aaKnown RBP5.1□□□□□ -1.59
SEC22C-205ENST00000417572 KRTAP4-8A0A0G2JLE6 195 aa5.09□□□□□ -1.59
SEC22C-205ENST00000417572 TNP1P09430 55 aa5.07□□□□□ -1.6
SEC22C-205ENST00000417572 KMT2DO14686 5537 aa5.06□□□□□ -1.6
SEC22C-205ENST00000417572 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
SEC22C-205ENST00000417572 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
SEC22C-205ENST00000417572 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
SEC22C-205ENST00000417572 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
SEC22C-205ENST00000417572 PMAIP1Q13794 54 aa5□□□□□ -1.61
SEC22C-205ENST00000417572 ROMO1P60602 79 aa4.99□□□□□ -1.61
SEC22C-205ENST00000417572 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
SEC22C-205ENST00000417572 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
SEC22C-205ENST00000417572 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
SEC22C-205ENST00000417572 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
SEC22C-205ENST00000417572 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
SEC22C-205ENST00000417572 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
SEC22C-205ENST00000417572 SPRR2FQ96RM1 72 aa4.92□□□□□ -1.62
SEC22C-205ENST00000417572 KRTAP4-12Q9BQ66 201 aa4.89□□□□□ -1.63
SEC22C-205ENST00000417572 KTN1-AS1Q86SY8 53 aa4.87□□□□□ -1.63
SEC22C-205ENST00000417572 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
SEC22C-205ENST00000417572 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
SEC22C-205ENST00000417572 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms