RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 HMCN2Q8NDA2 5059 aa9.46□□□□□ -0.89
RTN4R-202ENST00000416372 PMAIP1Q13794 54 aa9.43□□□□□ -0.9
RTN4R-202ENST00000416372 LPAP08519 4548 aa9.39□□□□□ -0.91
RTN4R-202ENST00000416372 SEC61BP60468 96 aaKnown RBP9.36□□□□□ -0.91
RTN4R-202ENST00000416372 SPTSSBQ8NFR3 76 aa9.35□□□□□ -0.91
RTN4R-202ENST00000416372 LRP2P98164 4655 aa9.35□□□□□ -0.91
RTN4R-202ENST00000416372 UBR4Q5T4S7 5183 aa9.33□□□□□ -0.92
RTN4R-202ENST00000416372 COX6B2Q6YFQ2 88 aa9.32□□□□□ -0.92
RTN4R-202ENST00000416372 A0A1B0GU69 56 aa9.3□□□□□ -0.92
RTN4R-202ENST00000416372 A6NN06 94 aa9.3□□□□□ -0.92
RTN4R-202ENST00000416372 KRTAP3-1Q9BYR8 98 aa9.29□□□□□ -0.92
RTN4R-202ENST00000416372 KTN1-AS1Q86SY8 53 aa9.25□□□□□ -0.93
RTN4R-202ENST00000416372 SPATA8Q6RVD6 105 aa9.19□□□□□ -0.94
RTN4R-202ENST00000416372 RBM12B-AS1Q9P1G2 102 aa9.17□□□□□ -0.94
RTN4R-202ENST00000416372 UQCR11O14957 56 aa9.15□□□□□ -0.94
RTN4R-202ENST00000416372 KRTAP4-1Q9BYQ7 146 aa9.14□□□□□ -0.95
RTN4R-202ENST00000416372 MIR22HGQ0VDD5 57 aa9.11□□□□□ -0.95
RTN4R-202ENST00000416372 SEC61GP60059 68 aa9.09□□□□□ -0.95
RTN4R-202ENST00000416372 H1FX-AS1Q4G0G2 97 aa9.09□□□□□ -0.95
RTN4R-202ENST00000416372 RNF213Q63HN8 5207 aa9.08□□□□□ -0.96
RTN4R-202ENST00000416372 MUC17Q685J3 4493 aa9.06□□□□□ -0.96
RTN4R-202ENST00000416372 S4R3F8 94 aa9.04□□□□□ -0.96
RTN4R-202ENST00000416372 KRTAP3-3Q9BYR6 98 aa8.96□□□□□ -0.98
RTN4R-202ENST00000416372 KRTAP19-2Q3LHN2 52 aa8.87□□□□□ -0.99
RTN4R-202ENST00000416372 CSAG1Q6PB30 78 aa8.83□□□□□ -1
RTN4R-202ENST00000416372 A0A1B0GU33 70 aa8.81□□□□□ -1
RTN4R-202ENST00000416372 MUC2Q02817 5179 aa8.81□□□□□ -1
RTN4R-202ENST00000416372 H0YAA0 97 aa8.8□□□□□ -1
RTN4R-202ENST00000416372 PRAC1Q96KF2 57 aa8.75□□□□□ -1.01
RTN4R-202ENST00000416372 ADM2Q7Z4H4 148 aa8.73□□□□□ -1.01
RTN4R-202ENST00000416372 LCE2CQ5TA81 110 aa8.66□□□□□ -1.02
RTN4R-202ENST00000416372 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
RTN4R-202ENST00000416372 KRTAP10-6P60371 365 aaPredicted RBP8.65□□□□□ -1.02
RTN4R-202ENST00000416372 P0C880 135 aa8.6□□□□□ -1.03
RTN4R-202ENST00000416372 FLGP20930 4061 aaPredicted RBP8.57□□□□□ -1.04
RTN4R-202ENST00000416372 K7ERS5 55 aa8.57□□□□□ -1.04
RTN4R-202ENST00000416372 LINC01554Q52M75 96 aa8.54□□□□□ -1.04
RTN4R-202ENST00000416372 FAT4Q6V0I7 4981 aa8.51□□□□□ -1.05
RTN4R-202ENST00000416372 MT1HP80294 61 aa8.48□□□□□ -1.05
RTN4R-202ENST00000416372 M0R2T5 61 aa8.47□□□□□ -1.05
RTN4R-202ENST00000416372 KRTAP13-4Q3LI77 160 aa8.43□□□□□ -1.06
RTN4R-202ENST00000416372 KRTAP25-1Q3LHN0 102 aa8.4□□□□□ -1.06
RTN4R-202ENST00000416372 M0QZ58 72 aa8.38□□□□□ -1.07
RTN4R-202ENST00000416372 ROMO1P60602 79 aa8.34□□□□□ -1.07
RTN4R-202ENST00000416372 LCE2AQ5TA79 106 aaPredicted RBP8.34□□□□□ -1.07
RTN4R-202ENST00000416372 LORP23490 312 aaPredicted RBP8.33□□□□□ -1.08
RTN4R-202ENST00000416372 R4GN34 69 aa8.33□□□□□ -1.08
RTN4R-202ENST00000416372 A0A0D9SG42 100 aa8.33□□□□□ -1.08
RTN4R-202ENST00000416372 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
RTN4R-202ENST00000416372 MT2AP02795 61 aa8.17□□□□□ -1.1
RTN4R-202ENST00000416372 KRTAP9-8Q9BYQ0 159 aa8.17□□□□□ -1.1
RTN4R-202ENST00000416372 KRTAP9-2Q9BYQ4 174 aa8.15□□□□□ -1.1
RTN4R-202ENST00000416372 KRTAP10-10P60014 251 aa8.15□□□□□ -1.11
RTN4R-202ENST00000416372 KRTAP12-2P59991 146 aa8.14□□□□□ -1.11
RTN4R-202ENST00000416372 KRTAP12-1P59990 96 aa8.13□□□□□ -1.11
RTN4R-202ENST00000416372 MT1FP04733 61 aa8.12□□□□□ -1.11
RTN4R-202ENST00000416372 SPINT4Q6UDR6 99 aa8.12□□□□□ -1.11
RTN4R-202ENST00000416372 SPRR2GQ9BYE4 73 aa8.02□□□□□ -1.13
RTN4R-202ENST00000416372 KRTAP19-1Q8IUB9 90 aa7.99□□□□□ -1.13
RTN4R-202ENST00000416372 FSIP2Q5CZC0 6907 aa7.92□□□□□ -1.14
RTN4R-202ENST00000416372 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
RTN4R-202ENST00000416372 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
RTN4R-202ENST00000416372 KRTAP9-3Q9BYQ3 159 aa7.88□□□□□ -1.15
RTN4R-202ENST00000416372 KRTAP9-6A0A140TA67 174 aa7.87□□□□□ -1.15
RTN4R-202ENST00000416372 CAMK2N1Q7Z7J9 78 aa7.84□□□□□ -1.15
RTN4R-202ENST00000416372 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
RTN4R-202ENST00000416372 KRTAP19-8Q3LI54 63 aa7.8□□□□□ -1.16
RTN4R-202ENST00000416372 MT1BP07438 61 aa7.7□□□□□ -1.18
RTN4R-202ENST00000416372 CRCT1Q9UGL9 99 aa7.69□□□□□ -1.18
RTN4R-202ENST00000416372 LCE2BO14633 110 aa7.65□□□□□ -1.18
RTN4R-202ENST00000416372 KRTAP15-1Q3LI76 137 aa7.64□□□□□ -1.19
RTN4R-202ENST00000416372 H3BS24 57 aa7.59□□□□□ -1.2
RTN4R-202ENST00000416372 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
RTN4R-202ENST00000416372 USH2AO75445 5202 aa7.48□□□□□ -1.21
RTN4R-202ENST00000416372 MT1XP80297 61 aa7.46□□□□□ -1.21
RTN4R-202ENST00000416372 KRTAP10-5P60370 271 aa7.46□□□□□ -1.22
RTN4R-202ENST00000416372 TNP1P09430 55 aa7.44□□□□□ -1.22
RTN4R-202ENST00000416372 SSPOA2VEC9 5147 aa7.42□□□□□ -1.22
RTN4R-202ENST00000416372 PRO2289Q9P1D8 64 aa7.4□□□□□ -1.23
RTN4R-202ENST00000416372 KRTAP23-1A1A580 65 aa7.38□□□□□ -1.23
RTN4R-202ENST00000416372 NDUFAF8A1L188 74 aa7.33□□□□□ -1.24
RTN4R-202ENST00000416372 FCGBPQ9Y6R7 5405 aaPredicted RBP7.25□□□□□ -1.25
RTN4R-202ENST00000416372 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
RTN4R-202ENST00000416372 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.17□□□□□ -1.26
RTN4R-202ENST00000416372 KRTAP19-6Q3LI70 58 aa7.16□□□□□ -1.26
RTN4R-202ENST00000416372 KRTAP10-12P60413 245 aa7.12□□□□□ -1.27
RTN4R-202ENST00000416372 LCE3AQ5TA76 89 aa7.12□□□□□ -1.27
RTN4R-202ENST00000416372 MACF1Q9UPN3 7388 aaKnown RBP7.1□□□□□ -1.27
RTN4R-202ENST00000416372 KRTAP9-7A8MTY7 169 aa7.08□□□□□ -1.28
RTN4R-202ENST00000416372 SYNE2Q8WXH0 6885 aaKnown RBP7.05□□□□□ -1.28
RTN4R-202ENST00000416372 LUZP6Q538Z0 58 aa7□□□□□ -1.29
RTN4R-202ENST00000416372 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
RTN4R-202ENST00000416372 SPRR5A0A1B0GTR4 108 aa6.93□□□□□ -1.3
RTN4R-202ENST00000416372 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
RTN4R-202ENST00000416372 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
RTN4R-202ENST00000416372 KRTAP12-3P60328 96 aa6.83□□□□□ -1.32
RTN4R-202ENST00000416372 KRTAP19-5Q3LI72 72 aa6.77□□□□□ -1.33
RTN4R-202ENST00000416372 KMT2DO14686 5537 aa6.74□□□□□ -1.33
RTN4R-202ENST00000416372 KRTAP6-3Q3LI67 103 aa6.68□□□□□ -1.34
RTN4R-202ENST00000416372 KRTAP19-7Q3SYF9 63 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms