RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 PRO2289Q9P1D8 64 aa7.37□□□□□ -1.23
LINC00887-202ENST00000414120 SPACA4Q8TDM5 124 aa7.35□□□□□ -1.23
LINC00887-202ENST00000414120 SPINK6Q6UWN8 80 aa7.34□□□□□ -1.23
LINC00887-202ENST00000414120 XP32Q5T750 250 aa7.32□□□□□ -1.24
LINC00887-202ENST00000414120 FAT1Q14517 4588 aa7.3□□□□□ -1.24
LINC00887-202ENST00000414120 APOBP04114 4563 aaKnown RBP7.28□□□□□ -1.24
LINC00887-202ENST00000414120 Q8N1X5 172 aa7.28□□□□□ -1.24
LINC00887-202ENST00000414120 SRRM2Q9UQ35 2752 aaKnown RBP7.27□□□□□ -1.25
LINC00887-202ENST00000414120 BIRC6Q9NR09 4857 aa7.26□□□□□ -1.25
LINC00887-202ENST00000414120 DNAH8Q96JB1 4490 aa7.26□□□□□ -1.25
LINC00887-202ENST00000414120 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
LINC00887-202ENST00000414120 RYR1P21817 5038 aa7.23□□□□□ -1.25
LINC00887-202ENST00000414120 HSPG2P98160 4391 aa7.22□□□□□ -1.25
LINC00887-202ENST00000414120 Q5VSD8 79 aa7.2□□□□□ -1.26
LINC00887-202ENST00000414120 S4R3F8 94 aa7.18□□□□□ -1.26
LINC00887-202ENST00000414120 KRTAP17-1Q9BYP8 105 aa7.17□□□□□ -1.26
LINC00887-202ENST00000414120 VPS13BQ7Z7G8 4022 aa7.16□□□□□ -1.26
LINC00887-202ENST00000414120 KRTAP4-5Q9BYR2 181 aa7.12□□□□□ -1.27
LINC00887-202ENST00000414120 HERC2O95714 4834 aa7.07□□□□□ -1.28
LINC00887-202ENST00000414120 KRTAP10-6P60371 365 aaPredicted RBP7.07□□□□□ -1.28
LINC00887-202ENST00000414120 KRTAP3-1Q9BYR8 98 aa7.06□□□□□ -1.28
LINC00887-202ENST00000414120 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
LINC00887-202ENST00000414120 MYCBP2O75592 4640 aa7.05□□□□□ -1.28
LINC00887-202ENST00000414120 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
LINC00887-202ENST00000414120 ABCA13Q86UQ4 5058 aa7.04□□□□□ -1.28
LINC00887-202ENST00000414120 INE1O15225 51 aa7.03□□□□□ -1.28
LINC00887-202ENST00000414120 DMBT1Q9UGM3 2413 aaPredicted RBP7.03□□□□□ -1.28
LINC00887-202ENST00000414120 A0A0D9SG42 100 aa7.02□□□□□ -1.28
LINC00887-202ENST00000414120 LRP1Q07954 4544 aaKnown RBP7□□□□□ -1.29
LINC00887-202ENST00000414120 R4GN34 69 aa7□□□□□ -1.29
LINC00887-202ENST00000414120 KRTAP12-2P59991 146 aa6.97□□□□□ -1.29
LINC00887-202ENST00000414120 PCLOQ9Y6V0 5065 aa6.96□□□□□ -1.3
LINC00887-202ENST00000414120 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
LINC00887-202ENST00000414120 KRTAP12-1P59990 96 aa6.93□□□□□ -1.3
LINC00887-202ENST00000414120 KRTAP1-4P0C5Y4 121 aa6.9□□□□□ -1.3
LINC00887-202ENST00000414120 KRTAP13-2Q52LG2 175 aa6.84□□□□□ -1.31
LINC00887-202ENST00000414120 PP632Q6XCG6 107 aa6.84□□□□□ -1.31
LINC00887-202ENST00000414120 PKHD1L1Q86WI1 4243 aa6.83□□□□□ -1.32
LINC00887-202ENST00000414120 FAT3Q8TDW7 4589 aa6.82□□□□□ -1.32
LINC00887-202ENST00000414120 MT1HL1P0DM35 61 aa6.79□□□□□ -1.32
LINC00887-202ENST00000414120 SPRR5A0A1B0GTR4 108 aa6.78□□□□□ -1.32
LINC00887-202ENST00000414120 HERC1Q15751 4861 aa6.77□□□□□ -1.33
LINC00887-202ENST00000414120 KRTAP10-8P60410 259 aa6.76□□□□□ -1.33
LINC00887-202ENST00000414120 TNXBP22105 4242 aa6.73□□□□□ -1.33
LINC00887-202ENST00000414120 M0QZ58 72 aa6.71□□□□□ -1.33
LINC00887-202ENST00000414120 KRTAP3-3Q9BYR6 98 aa6.71□□□□□ -1.33
LINC00887-202ENST00000414120 RPS29P62273 56 aaKnown RBP6.63□□□□□ -1.35
LINC00887-202ENST00000414120 LRP2P98164 4655 aa6.53□□□□□ -1.36
LINC00887-202ENST00000414120 C9orf92A6NGG3 77 aa6.51□□□□□ -1.37
LINC00887-202ENST00000414120 LPAP08519 4548 aa6.5□□□□□ -1.37
LINC00887-202ENST00000414120 HMCN2Q8NDA2 5059 aa6.49□□□□□ -1.37
LINC00887-202ENST00000414120 UBR4Q5T4S7 5183 aa6.39□□□□□ -1.39
LINC00887-202ENST00000414120 RNF213Q63HN8 5207 aa6.31□□□□□ -1.4
LINC00887-202ENST00000414120 MUC2Q02817 5179 aa6.27□□□□□ -1.4
LINC00887-202ENST00000414120 KRTAP4-1Q9BYQ7 146 aa6.11□□□□□ -1.43
LINC00887-202ENST00000414120 FAT4Q6V0I7 4981 aa6.03□□□□□ -1.44
LINC00887-202ENST00000414120 MUC17Q685J3 4493 aa6□□□□□ -1.45
LINC00887-202ENST00000414120 TNP1P09430 55 aa5.96□□□□□ -1.46
LINC00887-202ENST00000414120 M0R2T5 61 aa5.85□□□□□ -1.47
LINC00887-202ENST00000414120 KRTAP19-2Q3LHN2 52 aa5.82□□□□□ -1.48
LINC00887-202ENST00000414120 LCE2CQ5TA81 110 aa5.8□□□□□ -1.48
LINC00887-202ENST00000414120 LCE2DQ5TA82 110 aaPredicted RBP5.77□□□□□ -1.49
LINC00887-202ENST00000414120 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
LINC00887-202ENST00000414120 MT1HP80294 61 aa5.75□□□□□ -1.49
LINC00887-202ENST00000414120 FLGP20930 4061 aaPredicted RBP5.72□□□□□ -1.49
LINC00887-202ENST00000414120 LCE2AQ5TA79 106 aaPredicted RBP5.71□□□□□ -1.5
LINC00887-202ENST00000414120 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
LINC00887-202ENST00000414120 LCE2BO14633 110 aa5.51□□□□□ -1.53
LINC00887-202ENST00000414120 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
LINC00887-202ENST00000414120 KRTAP9-8Q9BYQ0 159 aa5.46□□□□□ -1.53
LINC00887-202ENST00000414120 MT2AP02795 61 aa5.46□□□□□ -1.54
LINC00887-202ENST00000414120 MT1FP04733 61 aa5.44□□□□□ -1.54
LINC00887-202ENST00000414120 KRTAP8-1Q8IUC2 63 aa5.41□□□□□ -1.54
LINC00887-202ENST00000414120 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
LINC00887-202ENST00000414120 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
LINC00887-202ENST00000414120 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
LINC00887-202ENST00000414120 USH2AO75445 5202 aa5.31□□□□□ -1.56
LINC00887-202ENST00000414120 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
LINC00887-202ENST00000414120 KRTAP19-1Q8IUB9 90 aa5.19□□□□□ -1.58
LINC00887-202ENST00000414120 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
LINC00887-202ENST00000414120 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
LINC00887-202ENST00000414120 KRTAP2-1Q9BYU5 128 aa5.18□□□□□ -1.58
LINC00887-202ENST00000414120 KRTAP2-2Q9BYT5 123 aa5.18□□□□□ -1.58
LINC00887-202ENST00000414120 KRTAP10-5P60370 271 aa5.14□□□□□ -1.59
LINC00887-202ENST00000414120 SPRR2GQ9BYE4 73 aa5.14□□□□□ -1.59
LINC00887-202ENST00000414120 SSPOA2VEC9 5147 aa5.12□□□□□ -1.59
LINC00887-202ENST00000414120 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
LINC00887-202ENST00000414120 CRCT1Q9UGL9 99 aa5.06□□□□□ -1.6
LINC00887-202ENST00000414120 MT1BP07438 61 aa5.04□□□□□ -1.6
LINC00887-202ENST00000414120 KRTAP19-8Q3LI54 63 aa5.02□□□□□ -1.61
LINC00887-202ENST00000414120 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
LINC00887-202ENST00000414120 FCGBPQ9Y6R7 5405 aaPredicted RBP4.96□□□□□ -1.62
LINC00887-202ENST00000414120 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
LINC00887-202ENST00000414120 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
LINC00887-202ENST00000414120 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
LINC00887-202ENST00000414120 MT1XP80297 61 aa4.82□□□□□ -1.64
LINC00887-202ENST00000414120 KRTAP6-3Q3LI67 103 aa4.81□□□□□ -1.64
LINC00887-202ENST00000414120 MACF1Q9UPN3 7388 aaKnown RBP4.81□□□□□ -1.64
LINC00887-202ENST00000414120 KMT2DO14686 5537 aa4.75□□□□□ -1.65
LINC00887-202ENST00000414120 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms