RNA–Protein interactions for RNA: ENST00000413164.6

SLC13A3-204, Transcript of solute carrier family 13 member 3, humanhuman

TSL 2 BASIC

Gene SLC13A3, Length 2,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-204ENST00000413164 SPTSSBQ8NFR3 76 aa10.89□□□□□ -0.67
SLC13A3-204ENST00000413164 PMAIP1Q13794 54 aa10.82□□□□□ -0.68
SLC13A3-204ENST00000413164 UQCR11O14957 56 aa10.79□□□□□ -0.68
SLC13A3-204ENST00000413164 SPATA8Q6RVD6 105 aa10.79□□□□□ -0.68
SLC13A3-204ENST00000413164 TPRXLQ17RH7 258 aa10.75□□□□□ -0.69
SLC13A3-204ENST00000413164 SEC61GP60059 68 aa10.75□□□□□ -0.69
SLC13A3-204ENST00000413164 A6NN06 94 aa10.72□□□□□ -0.69
SLC13A3-204ENST00000413164 MIR22HGQ0VDD5 57 aa10.71□□□□□ -0.69
SLC13A3-204ENST00000413164 KRTAP3-3Q9BYR6 98 aa10.62□□□□□ -0.71
SLC13A3-204ENST00000413164 HERC1Q15751 4861 aa10.6□□□□□ -0.71
SLC13A3-204ENST00000413164 LRP2P98164 4655 aa10.59□□□□□ -0.71
SLC13A3-204ENST00000413164 LPAP08519 4548 aa10.54□□□□□ -0.72
SLC13A3-204ENST00000413164 A0A1B0GU33 70 aa10.53□□□□□ -0.72
SLC13A3-204ENST00000413164 KTN1-AS1Q86SY8 53 aa10.53□□□□□ -0.72
SLC13A3-204ENST00000413164 H0YAA0 97 aa10.52□□□□□ -0.73
SLC13A3-204ENST00000413164 H1FX-AS1Q4G0G2 97 aa10.51□□□□□ -0.73
SLC13A3-204ENST00000413164 S4R3F8 94 aa10.51□□□□□ -0.73
SLC13A3-204ENST00000413164 KRTAP10-6P60371 365 aaPredicted RBP10.41□□□□□ -0.74
SLC13A3-204ENST00000413164 KRTAP3-2Q9BYR7 98 aa10.38□□□□□ -0.75
SLC13A3-204ENST00000413164 RBM12B-AS1Q9P1G2 102 aa10.38□□□□□ -0.75
SLC13A3-204ENST00000413164 HMCN2Q8NDA2 5059 aa10.37□□□□□ -0.75
SLC13A3-204ENST00000413164 SEC61BP60468 96 aaKnown RBP10.32□□□□□ -0.76
SLC13A3-204ENST00000413164 P0C880 135 aa10.22□□□□□ -0.77
SLC13A3-204ENST00000413164 KRTAP13-4Q3LI77 160 aa10.22□□□□□ -0.77
SLC13A3-204ENST00000413164 CSAG1Q6PB30 78 aa10.21□□□□□ -0.77
SLC13A3-204ENST00000413164 KRTAP4-1Q9BYQ7 146 aa10.19□□□□□ -0.78
SLC13A3-204ENST00000413164 MUC17Q685J3 4493 aa10.17□□□□□ -0.78
SLC13A3-204ENST00000413164 ADM2Q7Z4H4 148 aa10.17□□□□□ -0.78
SLC13A3-204ENST00000413164 PRAC1Q96KF2 57 aa10.12□□□□□ -0.79
SLC13A3-204ENST00000413164 K7ERS5 55 aa10.05□□□□□ -0.8
SLC13A3-204ENST00000413164 KRTAP19-2Q3LHN2 52 aa10.04□□□□□ -0.8
SLC13A3-204ENST00000413164 A0A0D9SG42 100 aa10.01□□□□□ -0.81
SLC13A3-204ENST00000413164 UBR4Q5T4S7 5183 aa9.98□□□□□ -0.81
SLC13A3-204ENST00000413164 M0QZ58 72 aa9.94□□□□□ -0.82
SLC13A3-204ENST00000413164 MUC2Q02817 5179 aa9.93□□□□□ -0.82
SLC13A3-204ENST00000413164 KRTAP12-2P59991 146 aa9.84□□□□□ -0.83
SLC13A3-204ENST00000413164 RNF213Q63HN8 5207 aa9.83□□□□□ -0.84
SLC13A3-204ENST00000413164 KRTAP12-1P59990 96 aa9.82□□□□□ -0.84
SLC13A3-204ENST00000413164 ROMO1P60602 79 aa9.8□□□□□ -0.84
SLC13A3-204ENST00000413164 R4GN34 69 aa9.73□□□□□ -0.85
SLC13A3-204ENST00000413164 KRTAP25-1Q3LHN0 102 aa9.72□□□□□ -0.85
SLC13A3-204ENST00000413164 LORP23490 312 aaPredicted RBP9.71□□□□□ -0.86
SLC13A3-204ENST00000413164 SPINT4Q6UDR6 99 aa9.71□□□□□ -0.86
SLC13A3-204ENST00000413164 LINC01554Q52M75 96 aa9.68□□□□□ -0.86
SLC13A3-204ENST00000413164 FLGP20930 4061 aaPredicted RBP9.67□□□□□ -0.86
SLC13A3-204ENST00000413164 LCE2CQ5TA81 110 aa9.61□□□□□ -0.87
SLC13A3-204ENST00000413164 CRIPTQ9P021 101 aa9.6□□□□□ -0.87
SLC13A3-204ENST00000413164 FAT4Q6V0I7 4981 aa9.49□□□□□ -0.89
SLC13A3-204ENST00000413164 MT1HP80294 61 aa9.47□□□□□ -0.89
SLC13A3-204ENST00000413164 M0R2T5 61 aa9.45□□□□□ -0.9
SLC13A3-204ENST00000413164 C10orf95Q9H7T3 257 aa9.38□□□□□ -0.91
SLC13A3-204ENST00000413164 LCE2DQ5TA82 110 aaPredicted RBP9.27□□□□□ -0.92
SLC13A3-204ENST00000413164 LCE2AQ5TA79 106 aaPredicted RBP9.26□□□□□ -0.93
SLC13A3-204ENST00000413164 CAMK2N1Q7Z7J9 78 aa9.15□□□□□ -0.94
SLC13A3-204ENST00000413164 SPRR2GQ9BYE4 73 aa9.15□□□□□ -0.94
SLC13A3-204ENST00000413164 KRTAP19-1Q8IUB9 90 aa9.1□□□□□ -0.95
SLC13A3-204ENST00000413164 KRTAP9-8Q9BYQ0 159 aa9.07□□□□□ -0.96
SLC13A3-204ENST00000413164 MT2AP02795 61 aa9.05□□□□□ -0.96
SLC13A3-204ENST00000413164 MT1FP04733 61 aa9.04□□□□□ -0.96
SLC13A3-204ENST00000413164 KRTAP10-10P60014 251 aa9□□□□□ -0.97
SLC13A3-204ENST00000413164 PLAC4Q8WY50 150 aa8.88□□□□□ -0.99
SLC13A3-204ENST00000413164 PP632Q6XCG6 107 aa8.85□□□□□ -0.99
SLC13A3-204ENST00000413164 TNP1P09430 55 aa8.81□□□□□ -1
SLC13A3-204ENST00000413164 KRTAP19-8Q3LI54 63 aa8.81□□□□□ -1
SLC13A3-204ENST00000413164 KRTAP15-1Q3LI76 137 aa8.78□□□□□ -1
SLC13A3-204ENST00000413164 KRTAP9-3Q9BYQ3 159 aa8.75□□□□□ -1.01
SLC13A3-204ENST00000413164 KRTAP23-1A1A580 65 aa8.71□□□□□ -1.01
SLC13A3-204ENST00000413164 MT1BP07438 61 aa8.68□□□□□ -1.02
SLC13A3-204ENST00000413164 LCE2BO14633 110 aa8.56□□□□□ -1.04
SLC13A3-204ENST00000413164 KRTAP10-5P60370 271 aa8.53□□□□□ -1.04
SLC13A3-204ENST00000413164 MT1XP80297 61 aa8.53□□□□□ -1.04
SLC13A3-204ENST00000413164 LCE3AQ5TA76 89 aa8.4□□□□□ -1.06
SLC13A3-204ENST00000413164 KRTAP9-2Q9BYQ4 174 aa8.34□□□□□ -1.07
SLC13A3-204ENST00000413164 NDUFAF8A1L188 74 aa8.32□□□□□ -1.08
SLC13A3-204ENST00000413164 USH2AO75445 5202 aa8.32□□□□□ -1.08
SLC13A3-204ENST00000413164 KRTAP8-1Q8IUC2 63 aa8.25□□□□□ -1.09
SLC13A3-204ENST00000413164 PRO2289Q9P1D8 64 aa8.25□□□□□ -1.09
SLC13A3-204ENST00000413164 FSIP2Q5CZC0 6907 aa8.25□□□□□ -1.09
SLC13A3-204ENST00000413164 KRTAP10-7P60409 375 aaPredicted RBP8.22□□□□□ -1.09
SLC13A3-204ENST00000413164 KRTAP10-12P60413 245 aa8.22□□□□□ -1.09
SLC13A3-204ENST00000413164 H3BS24 57 aa8.2□□□□□ -1.1
SLC13A3-204ENST00000413164 SPRR5A0A1B0GTR4 108 aa8.15□□□□□ -1.1
SLC13A3-204ENST00000413164 SSPOA2VEC9 5147 aa8.09□□□□□ -1.12
SLC13A3-204ENST00000413164 KRTAP19-6Q3LI70 58 aa8.08□□□□□ -1.12
SLC13A3-204ENST00000413164 LUZP6Q538Z0 58 aa8.03□□□□□ -1.12
SLC13A3-204ENST00000413164 KRTAP12-3P60328 96 aa8.03□□□□□ -1.12
SLC13A3-204ENST00000413164 CRCT1Q9UGL9 99 aa8.01□□□□□ -1.13
SLC13A3-204ENST00000413164 KRTAP19-5Q3LI72 72 aa7.81□□□□□ -1.16
SLC13A3-204ENST00000413164 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
SLC13A3-204ENST00000413164 KRTAP9-6A0A140TA67 174 aa7.78□□□□□ -1.16
SLC13A3-204ENST00000413164 KRTAP4-8A0A0G2JLE6 195 aa7.78□□□□□ -1.16
SLC13A3-204ENST00000413164 KRTAP4-8Q9BYQ9 185 aa7.78□□□□□ -1.16
SLC13A3-204ENST00000413164 KMT2DO14686 5537 aa7.75□□□□□ -1.17
SLC13A3-204ENST00000413164 KRTAP19-7Q3SYF9 63 aa7.61□□□□□ -1.19
SLC13A3-204ENST00000413164 LCE3CQ5T5A8 94 aa7.56□□□□□ -1.2
SLC13A3-204ENST00000413164 MACF1Q9UPN3 7388 aaKnown RBP7.45□□□□□ -1.22
SLC13A3-204ENST00000413164 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.41□□□□□ -1.22
SLC13A3-204ENST00000413164 MT1EP04732 61 aa7.41□□□□□ -1.22
SLC13A3-204ENST00000413164 KRTAP19-4Q3LI73 84 aa7.37□□□□□ -1.23
SLC13A3-204ENST00000413164 A0A0A0MQY5 61 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms