RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 SPATA8Q6RVD6 105 aa12.51□□□□□ -0.41
VRK2-202ENST00000412104 ABCA13Q86UQ4 5058 aa12.5□□□□□ -0.41
VRK2-202ENST00000412104 MIR22HGQ0VDD5 57 aa12.49□□□□□ -0.41
VRK2-202ENST00000412104 LRP2P98164 4655 aa12.46□□□□□ -0.42
VRK2-202ENST00000412104 J3QL48 77 aa12.45□□□□□ -0.42
VRK2-202ENST00000412104 LPAP08519 4548 aa12.44□□□□□ -0.42
VRK2-202ENST00000412104 KRTAP3-3Q9BYR6 98 aa12.43□□□□□ -0.42
VRK2-202ENST00000412104 S4R3F8 94 aa12.4□□□□□ -0.42
VRK2-202ENST00000412104 A6NN06 94 aa12.38□□□□□ -0.43
VRK2-202ENST00000412104 H1FX-AS1Q4G0G2 97 aa12.33□□□□□ -0.44
VRK2-202ENST00000412104 HERC2O95714 4834 aa12.31□□□□□ -0.44
VRK2-202ENST00000412104 A0A1B0GU33 70 aa12.31□□□□□ -0.44
VRK2-202ENST00000412104 BIRC6Q9NR09 4857 aa12.3□□□□□ -0.44
VRK2-202ENST00000412104 RBM12B-AS1Q9P1G2 102 aa12.27□□□□□ -0.44
VRK2-202ENST00000412104 H0YAA0 97 aa12.26□□□□□ -0.45
VRK2-202ENST00000412104 SEC61BP60468 96 aaKnown RBP12.23□□□□□ -0.45
VRK2-202ENST00000412104 KRTAP10-6P60371 365 aaPredicted RBP12.15□□□□□ -0.46
VRK2-202ENST00000412104 KTN1-AS1Q86SY8 53 aa12.15□□□□□ -0.46
VRK2-202ENST00000412104 KRTAP3-2Q9BYR7 98 aa12.11□□□□□ -0.47
VRK2-202ENST00000412104 KRTAP4-1Q9BYQ7 146 aa12.05□□□□□ -0.48
VRK2-202ENST00000412104 CSAG1Q6PB30 78 aa12.01□□□□□ -0.49
VRK2-202ENST00000412104 MUC17Q685J3 4493 aa12□□□□□ -0.49
VRK2-202ENST00000412104 P0C880 135 aa11.98□□□□□ -0.49
VRK2-202ENST00000412104 ADM2Q7Z4H4 148 aa11.95□□□□□ -0.5
VRK2-202ENST00000412104 KRTAP13-4Q3LI77 160 aa11.94□□□□□ -0.5
VRK2-202ENST00000412104 KRTAP19-2Q3LHN2 52 aa11.8□□□□□ -0.52
VRK2-202ENST00000412104 PCLOQ9Y6V0 5065 aa11.78□□□□□ -0.52
VRK2-202ENST00000412104 A0A0D9SG42 100 aa11.77□□□□□ -0.53
VRK2-202ENST00000412104 K7ERS5 55 aa11.76□□□□□ -0.53
VRK2-202ENST00000412104 PRAC1Q96KF2 57 aa11.74□□□□□ -0.53
VRK2-202ENST00000412104 HERC1Q15751 4861 aa11.67□□□□□ -0.54
VRK2-202ENST00000412104 M0QZ58 72 aa11.62□□□□□ -0.55
VRK2-202ENST00000412104 HMCN2Q8NDA2 5059 aa11.62□□□□□ -0.55
VRK2-202ENST00000412104 MUC2Q02817 5179 aa11.54□□□□□ -0.56
VRK2-202ENST00000412104 KRTAP12-2P59991 146 aa11.5□□□□□ -0.57
VRK2-202ENST00000412104 KRTAP12-1P59990 96 aa11.47□□□□□ -0.57
VRK2-202ENST00000412104 R4GN34 69 aa11.45□□□□□ -0.58
VRK2-202ENST00000412104 LORP23490 312 aaPredicted RBP11.42□□□□□ -0.58
VRK2-202ENST00000412104 SPINT4Q6UDR6 99 aa11.42□□□□□ -0.58
VRK2-202ENST00000412104 ROMO1P60602 79 aa11.41□□□□□ -0.58
VRK2-202ENST00000412104 FLGP20930 4061 aaPredicted RBP11.4□□□□□ -0.58
VRK2-202ENST00000412104 LINC01554Q52M75 96 aa11.34□□□□□ -0.59
VRK2-202ENST00000412104 LCE2CQ5TA81 110 aa11.29□□□□□ -0.6
VRK2-202ENST00000412104 KRTAP25-1Q3LHN0 102 aa11.26□□□□□ -0.61
VRK2-202ENST00000412104 CRIPTQ9P021 101 aa11.21□□□□□ -0.61
VRK2-202ENST00000412104 UBR4Q5T4S7 5183 aa11.07□□□□□ -0.64
VRK2-202ENST00000412104 RNF213Q63HN8 5207 aa11.06□□□□□ -0.64
VRK2-202ENST00000412104 MT1HP80294 61 aa11.02□□□□□ -0.65
VRK2-202ENST00000412104 FAT4Q6V0I7 4981 aa11.01□□□□□ -0.65
VRK2-202ENST00000412104 M0R2T5 61 aa10.97□□□□□ -0.65
VRK2-202ENST00000412104 C10orf95Q9H7T3 257 aa10.95□□□□□ -0.66
VRK2-202ENST00000412104 CAMK2N1Q7Z7J9 78 aa10.8□□□□□ -0.68
VRK2-202ENST00000412104 SPRR2GQ9BYE4 73 aa10.75□□□□□ -0.69
VRK2-202ENST00000412104 MT2AP02795 61 aa10.72□□□□□ -0.69
VRK2-202ENST00000412104 KRTAP19-1Q8IUB9 90 aa10.7□□□□□ -0.7
VRK2-202ENST00000412104 MT1FP04733 61 aa10.7□□□□□ -0.7
VRK2-202ENST00000412104 KRTAP9-8Q9BYQ0 159 aa10.69□□□□□ -0.7
VRK2-202ENST00000412104 KRTAP10-10P60014 251 aa10.65□□□□□ -0.7
VRK2-202ENST00000412104 PLAC4Q8WY50 150 aa10.51□□□□□ -0.73
VRK2-202ENST00000412104 KRTAP19-8Q3LI54 63 aa10.37□□□□□ -0.75
VRK2-202ENST00000412104 TNP1P09430 55 aa10.34□□□□□ -0.75
VRK2-202ENST00000412104 PP632Q6XCG6 107 aa10.31□□□□□ -0.76
VRK2-202ENST00000412104 KRTAP9-3Q9BYQ3 159 aa10.28□□□□□ -0.76
VRK2-202ENST00000412104 MT1BP07438 61 aa10.24□□□□□ -0.77
VRK2-202ENST00000412104 LCE2AQ5TA79 106 aaPredicted RBP10.16□□□□□ -0.78
VRK2-202ENST00000412104 KRTAP23-1A1A580 65 aa10.13□□□□□ -0.79
VRK2-202ENST00000412104 KRTAP15-1Q3LI76 137 aa10.13□□□□□ -0.79
VRK2-202ENST00000412104 MT1XP80297 61 aa10.04□□□□□ -0.8
VRK2-202ENST00000412104 KRTAP10-5P60370 271 aa10.03□□□□□ -0.8
VRK2-202ENST00000412104 LCE2BO14633 110 aa9.93□□□□□ -0.82
VRK2-202ENST00000412104 LCE3AQ5TA76 89 aa9.87□□□□□ -0.83
VRK2-202ENST00000412104 PRO2289Q9P1D8 64 aa9.78□□□□□ -0.84
VRK2-202ENST00000412104 KRTAP10-7P60409 375 aaPredicted RBP9.7□□□□□ -0.86
VRK2-202ENST00000412104 KRTAP10-12P60413 245 aa9.69□□□□□ -0.86
VRK2-202ENST00000412104 KRTAP8-1Q8IUC2 63 aa9.64□□□□□ -0.87
VRK2-202ENST00000412104 NDUFAF8A1L188 74 aa9.62□□□□□ -0.87
VRK2-202ENST00000412104 USH2AO75445 5202 aa9.52□□□□□ -0.88
VRK2-202ENST00000412104 KRTAP12-3P60328 96 aa9.43□□□□□ -0.9
VRK2-202ENST00000412104 SPRR5A0A1B0GTR4 108 aa9.42□□□□□ -0.9
VRK2-202ENST00000412104 H3BS24 57 aa9.37□□□□□ -0.91
VRK2-202ENST00000412104 LUZP6Q538Z0 58 aa9.35□□□□□ -0.91
VRK2-202ENST00000412104 KRTAP19-5Q3LI72 72 aa9.21□□□□□ -0.94
VRK2-202ENST00000412104 KRTAP4-8A0A0G2JLE6 195 aa9.19□□□□□ -0.94
VRK2-202ENST00000412104 KRTAP4-8Q9BYQ9 185 aa9.19□□□□□ -0.94
VRK2-202ENST00000412104 SSPOA2VEC9 5147 aa9.16□□□□□ -0.94
VRK2-202ENST00000412104 KRTAP19-6Q3LI70 58 aa9.12□□□□□ -0.95
VRK2-202ENST00000412104 KMT2DO14686 5537 aa9.1□□□□□ -0.95
VRK2-202ENST00000412104 LCE2DQ5TA82 110 aaPredicted RBP8.95□□□□□ -0.98
VRK2-202ENST00000412104 KRTAP19-7Q3SYF9 63 aa8.95□□□□□ -0.98
VRK2-202ENST00000412104 FSIP2Q5CZC0 6907 aa8.85□□□□□ -0.99
VRK2-202ENST00000412104 LCE3CQ5T5A8 94 aa8.84□□□□□ -0.99
VRK2-202ENST00000412104 MT1EP04732 61 aa8.74□□□□□ -1.01
VRK2-202ENST00000412104 MT1LQ93083 61 aa8.66□□□□□ -1.02
VRK2-202ENST00000412104 FCGBPQ9Y6R7 5405 aaPredicted RBP8.59□□□□□ -1.03
VRK2-202ENST00000412104 KRTAP19-4Q3LI73 84 aa8.58□□□□□ -1.04
VRK2-202ENST00000412104 KRTAP4-7Q9BYR0 210 aa8.54□□□□□ -1.04
VRK2-202ENST00000412104 A0A0A0MQY5 61 aa8.48□□□□□ -1.05
VRK2-202ENST00000412104 KRTAP9-6A8MVA2 160 aa8.46□□□□□ -1.05
VRK2-202ENST00000412104 KRTAP9-2Q9BYQ4 174 aa8.37□□□□□ -1.07
VRK2-202ENST00000412104 KRTAP19-3Q7Z4W3 81 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms