RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 K7ERS5 55 aa6.99□□□□□ -1.29
CLINT1-201ENST00000411809 RYR1P21817 5038 aa6.97□□□□□ -1.29
CLINT1-201ENST00000411809 KRTAP3-1Q9BYR8 98 aa6.97□□□□□ -1.29
CLINT1-201ENST00000411809 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
CLINT1-201ENST00000411809 H1FX-AS1Q4G0G2 97 aa6.93□□□□□ -1.3
CLINT1-201ENST00000411809 KRTAP25-1Q3LHN0 102 aa6.93□□□□□ -1.3
CLINT1-201ENST00000411809 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
CLINT1-201ENST00000411809 SPINT4Q6UDR6 99 aa6.9□□□□□ -1.3
CLINT1-201ENST00000411809 COX6B2Q6YFQ2 88 aa6.85□□□□□ -1.31
CLINT1-201ENST00000411809 ROMO1P60602 79 aa6.83□□□□□ -1.32
CLINT1-201ENST00000411809 Q5VSD8 79 aa6.78□□□□□ -1.32
CLINT1-201ENST00000411809 MYCBP2O75592 4640 aa6.77□□□□□ -1.33
CLINT1-201ENST00000411809 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
CLINT1-201ENST00000411809 EPPK1P58107 5090 aaKnown RBP6.76□□□□□ -1.33
CLINT1-201ENST00000411809 KIAA1109Q2LD37 5005 aa6.75□□□□□ -1.33
CLINT1-201ENST00000411809 MT1HL1P0DM35 61 aa6.75□□□□□ -1.33
CLINT1-201ENST00000411809 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.34
CLINT1-201ENST00000411809 RPL37P61927 97 aaKnown RBP6.69□□□□□ -1.34
CLINT1-201ENST00000411809 XP32Q5T750 250 aa6.68□□□□□ -1.34
CLINT1-201ENST00000411809 LPAP08519 4548 aa6.68□□□□□ -1.34
CLINT1-201ENST00000411809 P0C880 135 aa6.67□□□□□ -1.34
CLINT1-201ENST00000411809 KRTAP10-6P60371 365 aaPredicted RBP6.65□□□□□ -1.34
CLINT1-201ENST00000411809 KRTAP3-3Q9BYR6 98 aa6.64□□□□□ -1.35
CLINT1-201ENST00000411809 TPRXLQ17RH7 258 aa6.63□□□□□ -1.35
CLINT1-201ENST00000411809 ABCA13Q86UQ4 5058 aa6.6□□□□□ -1.35
CLINT1-201ENST00000411809 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
CLINT1-201ENST00000411809 S4R3F8 94 aa6.56□□□□□ -1.36
CLINT1-201ENST00000411809 LRP2P98164 4655 aa6.56□□□□□ -1.36
CLINT1-201ENST00000411809 NDUFAF8A1L188 74 aa6.54□□□□□ -1.36
CLINT1-201ENST00000411809 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
CLINT1-201ENST00000411809 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
CLINT1-201ENST00000411809 KRTAP4-5Q9BYR2 181 aa6.47□□□□□ -1.37
CLINT1-201ENST00000411809 KRTAP12-1P59990 96 aa6.39□□□□□ -1.39
CLINT1-201ENST00000411809 M0QZ58 72 aa6.37□□□□□ -1.39
CLINT1-201ENST00000411809 HERC2O95714 4834 aa6.34□□□□□ -1.39
CLINT1-201ENST00000411809 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.4
CLINT1-201ENST00000411809 R4GN34 69 aa6.33□□□□□ -1.4
CLINT1-201ENST00000411809 KRTAP19-2Q3LHN2 52 aa6.27□□□□□ -1.41
CLINT1-201ENST00000411809 BIRC6Q9NR09 4857 aa6.26□□□□□ -1.41
CLINT1-201ENST00000411809 KRTAP4-1Q9BYQ7 146 aa6.24□□□□□ -1.41
CLINT1-201ENST00000411809 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
CLINT1-201ENST00000411809 FLGP20930 4061 aaPredicted RBP6.15□□□□□ -1.43
CLINT1-201ENST00000411809 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
CLINT1-201ENST00000411809 J3QL48 77 aa6.12□□□□□ -1.43
CLINT1-201ENST00000411809 LORP23490 312 aaPredicted RBP6.1□□□□□ -1.43
CLINT1-201ENST00000411809 HMCN2Q8NDA2 5059 aa6.06□□□□□ -1.44
CLINT1-201ENST00000411809 PCLOQ9Y6V0 5065 aa6.06□□□□□ -1.44
CLINT1-201ENST00000411809 LUZP6Q538Z0 58 aa6.04□□□□□ -1.44
CLINT1-201ENST00000411809 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
CLINT1-201ENST00000411809 MUC2Q02817 5179 aa6.03□□□□□ -1.44
CLINT1-201ENST00000411809 HERC1Q15751 4861 aa6□□□□□ -1.45
CLINT1-201ENST00000411809 LCE2CQ5TA81 110 aa5.87□□□□□ -1.47
CLINT1-201ENST00000411809 M0R2T5 61 aa5.87□□□□□ -1.47
CLINT1-201ENST00000411809 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
CLINT1-201ENST00000411809 FAT4Q6V0I7 4981 aa5.74□□□□□ -1.49
CLINT1-201ENST00000411809 PP632Q6XCG6 107 aa5.72□□□□□ -1.49
CLINT1-201ENST00000411809 RNF213Q63HN8 5207 aa5.7□□□□□ -1.5
CLINT1-201ENST00000411809 TNP1P09430 55 aa5.67□□□□□ -1.5
CLINT1-201ENST00000411809 UBR4Q5T4S7 5183 aa5.67□□□□□ -1.5
CLINT1-201ENST00000411809 MT1HP80294 61 aa5.64□□□□□ -1.51
CLINT1-201ENST00000411809 SPRR2GQ9BYE4 73 aa5.63□□□□□ -1.51
CLINT1-201ENST00000411809 KRTAP19-1Q8IUB9 90 aa5.61□□□□□ -1.51
CLINT1-201ENST00000411809 KRTAP9-8Q9BYQ0 159 aa5.54□□□□□ -1.52
CLINT1-201ENST00000411809 MT2AP02795 61 aa5.51□□□□□ -1.53
CLINT1-201ENST00000411809 MT1FP04733 61 aa5.5□□□□□ -1.53
CLINT1-201ENST00000411809 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
CLINT1-201ENST00000411809 KRTAP10-10P60014 251 aa5.46□□□□□ -1.54
CLINT1-201ENST00000411809 KRTAP19-8Q3LI54 63 aa5.43□□□□□ -1.54
CLINT1-201ENST00000411809 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
CLINT1-201ENST00000411809 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
CLINT1-201ENST00000411809 MT1BP07438 61 aa5.34□□□□□ -1.55
CLINT1-201ENST00000411809 KRTAP9-3Q9BYQ3 159 aa5.32□□□□□ -1.56
CLINT1-201ENST00000411809 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
CLINT1-201ENST00000411809 MT1XP80297 61 aa5.26□□□□□ -1.57
CLINT1-201ENST00000411809 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
CLINT1-201ENST00000411809 LCE2AQ5TA79 106 aaPredicted RBP5.16□□□□□ -1.58
CLINT1-201ENST00000411809 KRTAP8-1Q8IUC2 63 aa5.13□□□□□ -1.59
CLINT1-201ENST00000411809 USH2AO75445 5202 aa5.11□□□□□ -1.59
CLINT1-201ENST00000411809 LCE2BO14633 110 aa5.1□□□□□ -1.59
CLINT1-201ENST00000411809 KMT2DO14686 5537 aa5.08□□□□□ -1.6
CLINT1-201ENST00000411809 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
CLINT1-201ENST00000411809 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
CLINT1-201ENST00000411809 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
CLINT1-201ENST00000411809 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
CLINT1-201ENST00000411809 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
CLINT1-201ENST00000411809 INE1O15225 51 aa4.93□□□□□ -1.62
CLINT1-201ENST00000411809 DSTQ03001 7570 aaKnown RBP4.82□□□□□ -1.64
CLINT1-201ENST00000411809 SSPOA2VEC9 5147 aa4.82□□□□□ -1.64
CLINT1-201ENST00000411809 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
CLINT1-201ENST00000411809 CRCT1Q9UGL9 99 aa4.79□□□□□ -1.64
CLINT1-201ENST00000411809 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
CLINT1-201ENST00000411809 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
CLINT1-201ENST00000411809 KRTAP4-8Q9BYQ9 185 aa4.76□□□□□ -1.65
CLINT1-201ENST00000411809 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
CLINT1-201ENST00000411809 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.65
CLINT1-201ENST00000411809 KRTAP19-7Q3SYF9 63 aa4.71□□□□□ -1.66
CLINT1-201ENST00000411809 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
CLINT1-201ENST00000411809 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
CLINT1-201ENST00000411809 KRTAP19-6Q3LI70 58 aa4.65□□□□□ -1.67
CLINT1-201ENST00000411809 MT1EP04732 61 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms