RNA–Protein interactions for RNA: ENST00000409556.5

KDM3A-203, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene KDM3A, Length 4,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-203ENST00000409556 DNAH10Q8IVF4 4471 aa6.85□□□□□ -1.31
KDM3A-203ENST00000409556 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
KDM3A-203ENST00000409556 CSMD3Q7Z407 3707 aa6.85□□□□□ -1.31
KDM3A-203ENST00000409556 DYNC1H1Q14204 4646 aaKnown RBP6.8□□□□□ -1.32
KDM3A-203ENST00000409556 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
KDM3A-203ENST00000409556 STARD9Q9P2P6 4700 aa6.76□□□□□ -1.33
KDM3A-203ENST00000409556 DNAH17Q9UFH2 4485 aa6.74□□□□□ -1.33
KDM3A-203ENST00000409556 PRKDCP78527 4128 aaKnown RBP6.73□□□□□ -1.33
KDM3A-203ENST00000409556 ANK2Q01484 3957 aa6.72□□□□□ -1.33
KDM3A-203ENST00000409556 LRP1BQ9NZR2 4599 aa6.71□□□□□ -1.34
KDM3A-203ENST00000409556 RYR1P21817 5038 aa6.68□□□□□ -1.34
KDM3A-203ENST00000409556 FAT1Q14517 4588 aa6.65□□□□□ -1.34
KDM3A-203ENST00000409556 KRTAP4-1Q9BYQ7 146 aa6.59□□□□□ -1.35
KDM3A-203ENST00000409556 KRTAP15-1Q3LI76 137 aa6.58□□□□□ -1.36
KDM3A-203ENST00000409556 FAT2Q9NYQ8 4349 aa6.57□□□□□ -1.36
KDM3A-203ENST00000409556 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
KDM3A-203ENST00000409556 DNAH2Q9P225 4427 aa6.56□□□□□ -1.36
KDM3A-203ENST00000409556 DYNC2H1Q8NCM8 4307 aaKnown RBP6.55□□□□□ -1.36
KDM3A-203ENST00000409556 KIAA1109Q2LD37 5005 aa6.52□□□□□ -1.37
KDM3A-203ENST00000409556 LORP23490 312 aaPredicted RBP6.49□□□□□ -1.37
KDM3A-203ENST00000409556 SACSQ9NZJ4 4579 aa6.49□□□□□ -1.37
KDM3A-203ENST00000409556 MT1HP80294 61 aa6.49□□□□□ -1.37
KDM3A-203ENST00000409556 DNAH3Q8TD57 4116 aa6.47□□□□□ -1.37
KDM3A-203ENST00000409556 RYR3Q15413 4870 aa6.46□□□□□ -1.38
KDM3A-203ENST00000409556 KMT2AQ03164 3969 aa6.41□□□□□ -1.38
KDM3A-203ENST00000409556 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
KDM3A-203ENST00000409556 MT2AP02795 61 aa6.34□□□□□ -1.39
KDM3A-203ENST00000409556 RYR2Q92736 4967 aa6.32□□□□□ -1.4
KDM3A-203ENST00000409556 KRTAP12-3P60328 96 aa6.31□□□□□ -1.4
KDM3A-203ENST00000409556 DNAH8Q96JB1 4490 aa6.31□□□□□ -1.4
KDM3A-203ENST00000409556 APOBP04114 4563 aaKnown RBP6.3□□□□□ -1.4
KDM3A-203ENST00000409556 DNAH6Q9C0G6 4158 aa6.28□□□□□ -1.4
KDM3A-203ENST00000409556 LYSTQ99698 3801 aa6.28□□□□□ -1.4
KDM3A-203ENST00000409556 CMYA5Q8N3K9 4069 aa6.28□□□□□ -1.4
KDM3A-203ENST00000409556 VPS13BQ7Z7G8 4022 aa6.28□□□□□ -1.4
KDM3A-203ENST00000409556 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
KDM3A-203ENST00000409556 BIRC6Q9NR09 4857 aa6.26□□□□□ -1.41
KDM3A-203ENST00000409556 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
KDM3A-203ENST00000409556 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
KDM3A-203ENST00000409556 SPRR2GQ9BYE4 73 aa6.21□□□□□ -1.42
KDM3A-203ENST00000409556 MT1FP04733 61 aa6.21□□□□□ -1.42
KDM3A-203ENST00000409556 HERC2O95714 4834 aa6.2□□□□□ -1.42
KDM3A-203ENST00000409556 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
KDM3A-203ENST00000409556 MYCBP2O75592 4640 aa6.13□□□□□ -1.43
KDM3A-203ENST00000409556 LRP1Q07954 4544 aaKnown RBP6.11□□□□□ -1.43
KDM3A-203ENST00000409556 FAT3Q8TDW7 4589 aa6.09□□□□□ -1.43
KDM3A-203ENST00000409556 DNAH7Q8WXX0 4024 aa6.08□□□□□ -1.44
KDM3A-203ENST00000409556 HYDINQ4G0P3 5121 aa6.05□□□□□ -1.44
KDM3A-203ENST00000409556 HECTD4Q9Y4D8 3996 aa5.99□□□□□ -1.45
KDM3A-203ENST00000409556 HSPG2P98160 4391 aa5.98□□□□□ -1.45
KDM3A-203ENST00000409556 PCLOQ9Y6V0 5065 aa5.93□□□□□ -1.46
KDM3A-203ENST00000409556 HERC1Q15751 4861 aa5.9□□□□□ -1.46
KDM3A-203ENST00000409556 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
KDM3A-203ENST00000409556 KRTAP19-8Q3LI54 63 aa5.86□□□□□ -1.47
KDM3A-203ENST00000409556 KRTAP19-1Q8IUB9 90 aa5.86□□□□□ -1.47
KDM3A-203ENST00000409556 SPRR2FQ96RM1 72 aa5.86□□□□□ -1.47
KDM3A-203ENST00000409556 PKHD1P08F94 4074 aa5.86□□□□□ -1.47
KDM3A-203ENST00000409556 FRAS1Q86XX4 4008 aa5.85□□□□□ -1.47
KDM3A-203ENST00000409556 LRP2P98164 4655 aa5.84□□□□□ -1.48
KDM3A-203ENST00000409556 LCE2CQ5TA81 110 aa5.81□□□□□ -1.48
KDM3A-203ENST00000409556 KRTAP9-8Q9BYQ0 159 aa5.79□□□□□ -1.48
KDM3A-203ENST00000409556 PKD1P98161 4303 aa5.79□□□□□ -1.48
KDM3A-203ENST00000409556 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
KDM3A-203ENST00000409556 PKHD1L1Q86WI1 4243 aa5.73□□□□□ -1.49
KDM3A-203ENST00000409556 KRTAP10-5P60370 271 aa5.71□□□□□ -1.5
KDM3A-203ENST00000409556 INE1O15225 51 aa5.71□□□□□ -1.5
KDM3A-203ENST00000409556 EPPK1P58107 5090 aaKnown RBP5.69□□□□□ -1.5
KDM3A-203ENST00000409556 MT1BP07438 61 aa5.67□□□□□ -1.5
KDM3A-203ENST00000409556 KRTAP10-7P60409 375 aaPredicted RBP5.66□□□□□ -1.5
KDM3A-203ENST00000409556 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
KDM3A-203ENST00000409556 ABCA13Q86UQ4 5058 aa5.66□□□□□ -1.5
KDM3A-203ENST00000409556 MT1XP80297 61 aa5.63□□□□□ -1.51
KDM3A-203ENST00000409556 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
KDM3A-203ENST00000409556 KRTAP19-2Q3LHN2 52 aa5.59□□□□□ -1.52
KDM3A-203ENST00000409556 LPAP08519 4548 aa5.56□□□□□ -1.52
KDM3A-203ENST00000409556 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
KDM3A-203ENST00000409556 SPRR2EP22531 72 aa5.53□□□□□ -1.52
KDM3A-203ENST00000409556 SPRR2BP35325 72 aa5.53□□□□□ -1.52
KDM3A-203ENST00000409556 SPRR2AP35326 72 aa5.53□□□□□ -1.52
KDM3A-203ENST00000409556 TNXBP22105 4242 aa5.49□□□□□ -1.53
KDM3A-203ENST00000409556 LCE2BO14633 110 aa5.43□□□□□ -1.54
KDM3A-203ENST00000409556 MUC17Q685J3 4493 aa5.38□□□□□ -1.55
KDM3A-203ENST00000409556 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
KDM3A-203ENST00000409556 KRTAP4-8Q9BYQ9 185 aa5.38□□□□□ -1.55
KDM3A-203ENST00000409556 SPRR2DP22532 72 aa5.35□□□□□ -1.55
KDM3A-203ENST00000409556 UBR4Q5T4S7 5183 aa5.35□□□□□ -1.55
KDM3A-203ENST00000409556 RNF213Q63HN8 5207 aa5.34□□□□□ -1.56
KDM3A-203ENST00000409556 FLGP20930 4061 aaPredicted RBP5.33□□□□□ -1.56
KDM3A-203ENST00000409556 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
KDM3A-203ENST00000409556 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
KDM3A-203ENST00000409556 MT1GP13640 62 aa5.3□□□□□ -1.56
KDM3A-203ENST00000409556 FAT4Q6V0I7 4981 aa5.29□□□□□ -1.56
KDM3A-203ENST00000409556 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
KDM3A-203ENST00000409556 LCE2DQ5TA82 110 aaPredicted RBP5.21□□□□□ -1.58
KDM3A-203ENST00000409556 HMCN2Q8NDA2 5059 aa5.18□□□□□ -1.58
KDM3A-203ENST00000409556 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
KDM3A-203ENST00000409556 FSIP2Q5CZC0 6907 aa5.12□□□□□ -1.59
KDM3A-203ENST00000409556 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
KDM3A-203ENST00000409556 MT1EP04732 61 aa5.07□□□□□ -1.6
KDM3A-203ENST00000409556 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms