RNA–Protein interactions for RNA: ENST00000407847.4

PRDM6-201, Transcript of PR/SET domain 6, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRDM6, Length 9,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6-201ENST00000407847 CSMD3Q7Z407 3707 aa6.18□□□□□ -1.42
PRDM6-201ENST00000407847 ANK2Q01484 3957 aa6.17□□□□□ -1.42
PRDM6-201ENST00000407847 CUBNO60494 3623 aa6.16□□□□□ -1.42
PRDM6-201ENST00000407847 DNAH6Q9C0G6 4158 aa6.11□□□□□ -1.43
PRDM6-201ENST00000407847 DNAH1Q9P2D7 4330 aa6.11□□□□□ -1.43
PRDM6-201ENST00000407847 SVEP1Q4LDE5 3571 aa6.09□□□□□ -1.43
PRDM6-201ENST00000407847 KRTAP10-4P60372 401 aaPredicted RBP6.08□□□□□ -1.44
PRDM6-201ENST00000407847 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
PRDM6-201ENST00000407847 KRTAP8-1Q8IUC2 63 aa6.08□□□□□ -1.44
PRDM6-201ENST00000407847 HUWE1Q7Z6Z7 4374 aaKnown RBP6.07□□□□□ -1.44
PRDM6-201ENST00000407847 CRCT1Q9UGL9 99 aa6.02□□□□□ -1.45
PRDM6-201ENST00000407847 SPRR2GQ9BYE4 73 aa6□□□□□ -1.45
PRDM6-201ENST00000407847 CSMD2Q7Z408 3487 aa6□□□□□ -1.45
PRDM6-201ENST00000407847 KMT2AQ03164 3969 aa5.95□□□□□ -1.46
PRDM6-201ENST00000407847 DNAH2Q9P225 4427 aa5.91□□□□□ -1.46
PRDM6-201ENST00000407847 VPS13BQ7Z7G8 4022 aa5.88□□□□□ -1.47
PRDM6-201ENST00000407847 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
PRDM6-201ENST00000407847 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
PRDM6-201ENST00000407847 FRAS1Q86XX4 4008 aa5.76□□□□□ -1.49
PRDM6-201ENST00000407847 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
PRDM6-201ENST00000407847 PRKDCP78527 4128 aaKnown RBP5.74□□□□□ -1.49
PRDM6-201ENST00000407847 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
PRDM6-201ENST00000407847 MT3P25713 68 aa5.62□□□□□ -1.51
PRDM6-201ENST00000407847 ANK3Q12955 4377 aaKnown RBP5.57□□□□□ -1.52
PRDM6-201ENST00000407847 KRTAP19-5Q3LI72 72 aa5.55□□□□□ -1.52
PRDM6-201ENST00000407847 DNAH10Q8IVF4 4471 aa5.52□□□□□ -1.53
PRDM6-201ENST00000407847 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
PRDM6-201ENST00000407847 MT1HP80294 61 aa5.49□□□□□ -1.53
PRDM6-201ENST00000407847 MT2AP02795 61 aa5.44□□□□□ -1.54
PRDM6-201ENST00000407847 PKHD1P08F94 4074 aa5.44□□□□□ -1.54
PRDM6-201ENST00000407847 SPRR2FQ96RM1 72 aa5.39□□□□□ -1.55
PRDM6-201ENST00000407847 KRTAP19-8Q3LI54 63 aa5.39□□□□□ -1.55
PRDM6-201ENST00000407847 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
PRDM6-201ENST00000407847 KRTAP4-5Q9BYR2 181 aa5.31□□□□□ -1.56
PRDM6-201ENST00000407847 FAT2Q9NYQ8 4349 aa5.3□□□□□ -1.56
PRDM6-201ENST00000407847 DYNC2H1Q8NCM8 4307 aaKnown RBP5.27□□□□□ -1.57
PRDM6-201ENST00000407847 VPS13DQ5THJ4 4388 aa5.24□□□□□ -1.57
PRDM6-201ENST00000407847 MT1FP04733 61 aa5.21□□□□□ -1.58
PRDM6-201ENST00000407847 DNAH11Q96DT5 4516 aa5.19□□□□□ -1.58
PRDM6-201ENST00000407847 LCE3DQ9BYE3 92 aa5.19□□□□□ -1.58
PRDM6-201ENST00000407847 MT1GP13640 62 aa5.19□□□□□ -1.58
PRDM6-201ENST00000407847 LCE3EQ5T5B0 92 aa5.16□□□□□ -1.58
PRDM6-201ENST00000407847 KRTAP4-1Q9BYQ7 146 aa5.14□□□□□ -1.59
PRDM6-201ENST00000407847 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
PRDM6-201ENST00000407847 LRP1Q07954 4544 aaKnown RBP5.11□□□□□ -1.59
PRDM6-201ENST00000407847 LCE2BO14633 110 aa5.09□□□□□ -1.59
PRDM6-201ENST00000407847 PKHD1L1Q86WI1 4243 aa5.07□□□□□ -1.6
PRDM6-201ENST00000407847 MT1XP80297 61 aa5.07□□□□□ -1.6
PRDM6-201ENST00000407847 MT1LQ93083 61 aa5.05□□□□□ -1.6
PRDM6-201ENST00000407847 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
PRDM6-201ENST00000407847 SPRR2EP22531 72 aa5.02□□□□□ -1.61
PRDM6-201ENST00000407847 SPRR2BP35325 72 aa5.02□□□□□ -1.61
PRDM6-201ENST00000407847 SPRR2AP35326 72 aa5.02□□□□□ -1.61
PRDM6-201ENST00000407847 DNAH9Q9NYC9 4486 aa5.02□□□□□ -1.61
PRDM6-201ENST00000407847 DNAH17Q9UFH2 4485 aa4.98□□□□□ -1.61
PRDM6-201ENST00000407847 SPRR2DP22532 72 aa4.96□□□□□ -1.62
PRDM6-201ENST00000407847 HSPG2P98160 4391 aa4.93□□□□□ -1.62
PRDM6-201ENST00000407847 DNAH8Q96JB1 4490 aa4.92□□□□□ -1.62
PRDM6-201ENST00000407847 MT1EP04732 61 aa4.86□□□□□ -1.63
PRDM6-201ENST00000407847 DYNC1H1Q14204 4646 aaKnown RBP4.85□□□□□ -1.63
PRDM6-201ENST00000407847 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.63
PRDM6-201ENST00000407847 STARD9Q9P2P6 4700 aa4.83□□□□□ -1.64
PRDM6-201ENST00000407847 PKD1P98161 4303 aa4.8□□□□□ -1.64
PRDM6-201ENST00000407847 DNAH5Q8TE73 4624 aa4.78□□□□□ -1.64
PRDM6-201ENST00000407847 MT1BP07438 61 aa4.75□□□□□ -1.65
PRDM6-201ENST00000407847 KRTAP9-8Q9BYQ0 159 aa4.7□□□□□ -1.66
PRDM6-201ENST00000407847 APOBP04114 4563 aaKnown RBP4.68□□□□□ -1.66
PRDM6-201ENST00000407847 TNXBP22105 4242 aa4.68□□□□□ -1.66
PRDM6-201ENST00000407847 SACSQ9NZJ4 4579 aa4.67□□□□□ -1.66
PRDM6-201ENST00000407847 LCE2CQ5TA81 110 aa4.67□□□□□ -1.66
PRDM6-201ENST00000407847 PLECQ15149 4684 aaKnown RBP4.64□□□□□ -1.67
PRDM6-201ENST00000407847 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
PRDM6-201ENST00000407847 MT1MQ8N339 61 aa4.62□□□□□ -1.67
PRDM6-201ENST00000407847 PRM1P04553 51 aa4.6□□□□□ -1.67
PRDM6-201ENST00000407847 MT1AP04731 61 aa4.59□□□□□ -1.67
PRDM6-201ENST00000407847 KRTAP2-3P0C7H8 128 aa4.5□□□□□ -1.69
PRDM6-201ENST00000407847 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
PRDM6-201ENST00000407847 KRTAP2-1Q9BYU5 128 aa4.5□□□□□ -1.69
PRDM6-201ENST00000407847 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
PRDM6-201ENST00000407847 LRP1BQ9NZR2 4599 aa4.45□□□□□ -1.7
PRDM6-201ENST00000407847 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
PRDM6-201ENST00000407847 KRTAP4-8A0A0G2JLE6 195 aa4.33□□□□□ -1.72
PRDM6-201ENST00000407847 KRTAP4-8Q9BYQ9 185 aa4.33□□□□□ -1.72
PRDM6-201ENST00000407847 FAT3Q8TDW7 4589 aa4.28□□□□□ -1.72
PRDM6-201ENST00000407847 RYR1P21817 5038 aa4.24□□□□□ -1.73
PRDM6-201ENST00000407847 FAT1Q14517 4588 aa4.24□□□□□ -1.73
PRDM6-201ENST00000407847 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
PRDM6-201ENST00000407847 MYCBP2O75592 4640 aa4.21□□□□□ -1.73
PRDM6-201ENST00000407847 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
PRDM6-201ENST00000407847 KRTAP19-2Q3LHN2 52 aa4.12□□□□□ -1.75
PRDM6-201ENST00000407847 MT4P47944 62 aa4.11□□□□□ -1.75
PRDM6-201ENST00000407847 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
PRDM6-201ENST00000407847 MUC17Q685J3 4493 aa4.09□□□□□ -1.75
PRDM6-201ENST00000407847 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
PRDM6-201ENST00000407847 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
PRDM6-201ENST00000407847 KRTAP4-7Q9BYR0 210 aa4.02□□□□□ -1.77
PRDM6-201ENST00000407847 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
PRDM6-201ENST00000407847 DNHD1Q96M86 4753 aa3.97□□□□□ -1.77
PRDM6-201ENST00000407847 RYR3Q15413 4870 aa3.95□□□□□ -1.78
PRDM6-201ENST00000407847 PCLOQ9Y6V0 5065 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms