RNA–Protein interactions for RNA: ENST00000407684.1

GAREM2-202, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

TSL 2 BASIC

Gene GAREM2, Length 5,138 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-202ENST00000407684 DNAH11Q96DT5 4516 aa8.71□□□□□ -1.02
GAREM2-202ENST00000407684 KRTAP4-5Q9BYR2 181 aa8.7□□□□□ -1.02
GAREM2-202ENST00000407684 DYNC2H1Q8NCM8 4307 aaKnown RBP8.7□□□□□ -1.02
GAREM2-202ENST00000407684 CSMD3Q7Z407 3707 aa8.66□□□□□ -1.02
GAREM2-202ENST00000407684 DYNC1H1Q14204 4646 aaKnown RBP8.61□□□□□ -1.03
GAREM2-202ENST00000407684 DNAH2Q9P225 4427 aa8.58□□□□□ -1.04
GAREM2-202ENST00000407684 DNAH6Q9C0G6 4158 aa8.56□□□□□ -1.04
GAREM2-202ENST00000407684 LRP1BQ9NZR2 4599 aa8.55□□□□□ -1.04
GAREM2-202ENST00000407684 KMT2AQ03164 3969 aa8.53□□□□□ -1.04
GAREM2-202ENST00000407684 KRTAP3-1Q9BYR8 98 aa8.52□□□□□ -1.05
GAREM2-202ENST00000407684 DNAH7Q8WXX0 4024 aa8.5□□□□□ -1.05
GAREM2-202ENST00000407684 KRTAP12-2P59991 146 aa8.48□□□□□ -1.05
GAREM2-202ENST00000407684 KRTAP15-1Q3LI76 137 aa8.46□□□□□ -1.05
GAREM2-202ENST00000407684 FAT2Q9NYQ8 4349 aa8.43□□□□□ -1.06
GAREM2-202ENST00000407684 FAT1Q14517 4588 aa8.36□□□□□ -1.07
GAREM2-202ENST00000407684 SACSQ9NZJ4 4579 aa8.36□□□□□ -1.07
GAREM2-202ENST00000407684 DNAH8Q96JB1 4490 aa8.35□□□□□ -1.07
GAREM2-202ENST00000407684 KRTAP13-4Q3LI77 160 aa8.34□□□□□ -1.07
GAREM2-202ENST00000407684 KRTAP12-1P59990 96 aa8.32□□□□□ -1.08
GAREM2-202ENST00000407684 RYR2Q92736 4967 aa8.31□□□□□ -1.08
GAREM2-202ENST00000407684 KRTAP10-6P60371 365 aaPredicted RBP8.31□□□□□ -1.08
GAREM2-202ENST00000407684 LYSTQ99698 3801 aa8.26□□□□□ -1.09
GAREM2-202ENST00000407684 HECTD4Q9Y4D8 3996 aa8.22□□□□□ -1.09
GAREM2-202ENST00000407684 HYDINQ4G0P3 5121 aa8.19□□□□□ -1.1
GAREM2-202ENST00000407684 RYR3Q15413 4870 aa8.15□□□□□ -1.1
GAREM2-202ENST00000407684 KIAA1109Q2LD37 5005 aa8.15□□□□□ -1.1
GAREM2-202ENST00000407684 VPS13BQ7Z7G8 4022 aa8.15□□□□□ -1.1
GAREM2-202ENST00000407684 RYR1P21817 5038 aa8.14□□□□□ -1.11
GAREM2-202ENST00000407684 APOBP04114 4563 aaKnown RBP8.13□□□□□ -1.11
GAREM2-202ENST00000407684 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
GAREM2-202ENST00000407684 KRTAP17-1Q9BYP8 105 aa8.09□□□□□ -1.11
GAREM2-202ENST00000407684 KRTAP3-3Q9BYR6 98 aa8.05□□□□□ -1.12
GAREM2-202ENST00000407684 PKD1P98161 4303 aa7.96□□□□□ -1.14
GAREM2-202ENST00000407684 KMT2CQ8NEZ4 4911 aaKnown RBP7.91□□□□□ -1.14
GAREM2-202ENST00000407684 FRAS1Q86XX4 4008 aa7.91□□□□□ -1.14
GAREM2-202ENST00000407684 PKHD1P08F94 4074 aa7.91□□□□□ -1.14
GAREM2-202ENST00000407684 BIRC6Q9NR09 4857 aa7.89□□□□□ -1.15
GAREM2-202ENST00000407684 HSPG2P98160 4391 aa7.88□□□□□ -1.15
GAREM2-202ENST00000407684 KRTAP4-1Q9BYQ7 146 aa7.84□□□□□ -1.15
GAREM2-202ENST00000407684 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
GAREM2-202ENST00000407684 HERC2O95714 4834 aa7.74□□□□□ -1.17
GAREM2-202ENST00000407684 FAT3Q8TDW7 4589 aa7.7□□□□□ -1.18
GAREM2-202ENST00000407684 CRCT1Q9UGL9 99 aa7.67□□□□□ -1.18
GAREM2-202ENST00000407684 INE1O15225 51 aa7.65□□□□□ -1.18
GAREM2-202ENST00000407684 MYCBP2O75592 4640 aa7.63□□□□□ -1.19
GAREM2-202ENST00000407684 EPPK1P58107 5090 aaKnown RBP7.57□□□□□ -1.2
GAREM2-202ENST00000407684 MT1HP80294 61 aa7.56□□□□□ -1.2
GAREM2-202ENST00000407684 KRTAP10-12P60413 245 aa7.55□□□□□ -1.2
GAREM2-202ENST00000407684 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
GAREM2-202ENST00000407684 PKHD1L1Q86WI1 4243 aa7.47□□□□□ -1.21
GAREM2-202ENST00000407684 TNXBP22105 4242 aa7.44□□□□□ -1.22
GAREM2-202ENST00000407684 KRTAP23-1A1A580 65 aa7.4□□□□□ -1.22
GAREM2-202ENST00000407684 ABCA13Q86UQ4 5058 aa7.37□□□□□ -1.23
GAREM2-202ENST00000407684 MT2AP02795 61 aa7.35□□□□□ -1.23
GAREM2-202ENST00000407684 HERC1Q15751 4861 aa7.34□□□□□ -1.23
GAREM2-202ENST00000407684 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
GAREM2-202ENST00000407684 LRP2P98164 4655 aa7.33□□□□□ -1.24
GAREM2-202ENST00000407684 LCE3AQ5TA76 89 aa7.3□□□□□ -1.24
GAREM2-202ENST00000407684 SPRR2GQ9BYE4 73 aa7.25□□□□□ -1.25
GAREM2-202ENST00000407684 MT1FP04733 61 aa7.23□□□□□ -1.25
GAREM2-202ENST00000407684 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
GAREM2-202ENST00000407684 LPAP08519 4548 aa7.18□□□□□ -1.26
GAREM2-202ENST00000407684 PCLOQ9Y6V0 5065 aa7.16□□□□□ -1.26
GAREM2-202ENST00000407684 LCE2CQ5TA81 110 aa7.14□□□□□ -1.27
GAREM2-202ENST00000407684 KRTAP10-5P60370 271 aa7.1□□□□□ -1.27
GAREM2-202ENST00000407684 KRTAP19-2Q3LHN2 52 aa7.04□□□□□ -1.28
GAREM2-202ENST00000407684 KRTAP9-8Q9BYQ0 159 aa6.97□□□□□ -1.29
GAREM2-202ENST00000407684 KRTAP19-1Q8IUB9 90 aa6.97□□□□□ -1.29
GAREM2-202ENST00000407684 MUC17Q685J3 4493 aa6.94□□□□□ -1.3
GAREM2-202ENST00000407684 KRTAP19-8Q3LI54 63 aa6.93□□□□□ -1.3
GAREM2-202ENST00000407684 SPRR5A0A1B0GTR4 108 aa6.86□□□□□ -1.31
GAREM2-202ENST00000407684 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
GAREM2-202ENST00000407684 HMCN2Q8NDA2 5059 aa6.85□□□□□ -1.31
GAREM2-202ENST00000407684 FLGP20930 4061 aaPredicted RBP6.82□□□□□ -1.32
GAREM2-202ENST00000407684 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.32
GAREM2-202ENST00000407684 RNF213Q63HN8 5207 aa6.77□□□□□ -1.33
GAREM2-202ENST00000407684 MT1BP07438 61 aa6.72□□□□□ -1.33
GAREM2-202ENST00000407684 SPRR2FQ96RM1 72 aa6.67□□□□□ -1.34
GAREM2-202ENST00000407684 FAT4Q6V0I7 4981 aa6.65□□□□□ -1.35
GAREM2-202ENST00000407684 MT1XP80297 61 aa6.61□□□□□ -1.35
GAREM2-202ENST00000407684 LCE2AQ5TA79 106 aaPredicted RBP6.58□□□□□ -1.36
GAREM2-202ENST00000407684 KRTAP19-5Q3LI72 72 aa6.56□□□□□ -1.36
GAREM2-202ENST00000407684 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.37
GAREM2-202ENST00000407684 LCE2BO14633 110 aa6.51□□□□□ -1.37
GAREM2-202ENST00000407684 KRTAP19-4Q3LI73 84 aa6.5□□□□□ -1.37
GAREM2-202ENST00000407684 LCE3CQ5T5A8 94 aa6.46□□□□□ -1.38
GAREM2-202ENST00000407684 MUC2Q02817 5179 aa6.37□□□□□ -1.39
GAREM2-202ENST00000407684 SPRR2EP22531 72 aa6.31□□□□□ -1.4
GAREM2-202ENST00000407684 SPRR2BP35325 72 aa6.31□□□□□ -1.4
GAREM2-202ENST00000407684 SPRR2AP35326 72 aa6.31□□□□□ -1.4
GAREM2-202ENST00000407684 LCE2DQ5TA82 110 aaPredicted RBP6.27□□□□□ -1.41
GAREM2-202ENST00000407684 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
GAREM2-202ENST00000407684 KRTAP19-6Q3LI70 58 aa6.22□□□□□ -1.41
GAREM2-202ENST00000407684 KRTAP4-8A0A0G2JLE6 195 aa6.19□□□□□ -1.42
GAREM2-202ENST00000407684 KRTAP4-8Q9BYQ9 185 aa6.19□□□□□ -1.42
GAREM2-202ENST00000407684 KRTAP9-2Q9BYQ4 174 aa6.15□□□□□ -1.42
GAREM2-202ENST00000407684 SPRR2DP22532 72 aa6.15□□□□□ -1.42
GAREM2-202ENST00000407684 MT1GP13640 62 aa5.96□□□□□ -1.46
GAREM2-202ENST00000407684 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
GAREM2-202ENST00000407684 FSIP2Q5CZC0 6907 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms