RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 SONP18583 2426 aaKnown RBP0.22□□□□□ -2.37
PTPN12-202ENST00000407343 FAM186AA6NE01 2351 aa0.21□□□□□ -2.38
PTPN12-202ENST00000407343 SACSQ9NZJ4 4579 aa0.21□□□□□ -2.38
PTPN12-202ENST00000407343 HTTP42858 3142 aa0.21□□□□□ -2.38
PTPN12-202ENST00000407343 TLN1Q9Y490 2541 aaKnown RBP0.21□□□□□ -2.38
PTPN12-202ENST00000407343 HERC2O95714 4834 aa0.21□□□□□ -2.38
PTPN12-202ENST00000407343 UNC80Q8N2C7 3258 aa0.21□□□□□ -2.38
PTPN12-202ENST00000407343 M0QY20 66 aa0.21□□□□□ -2.38
PTPN12-202ENST00000407343 CUBNO60494 3623 aa0.21□□□□□ -2.38
PTPN12-202ENST00000407343 SSPOA2VEC9 5147 aa0.21□□□□□ -2.38
PTPN12-202ENST00000407343 HECTD4Q9Y4D8 3996 aa0.21□□□□□ -2.38
PTPN12-202ENST00000407343 ABCA13Q86UQ4 5058 aa0.2□□□□□ -2.38
PTPN12-202ENST00000407343 STAB2Q8WWQ8 2551 aa0.2□□□□□ -2.38
PTPN12-202ENST00000407343 ACACAQ13085 2346 aa0.2□□□□□ -2.38
PTPN12-202ENST00000407343 USP34Q70CQ2 3546 aa0.2□□□□□ -2.38
PTPN12-202ENST00000407343 DNAH11Q96DT5 4516 aa0.2□□□□□ -2.38
PTPN12-202ENST00000407343 CFAP47Q6ZTR5 3102 aa0.2□□□□□ -2.38
PTPN12-202ENST00000407343 DNAH9Q9NYC9 4486 aa0.2□□□□□ -2.38
PTPN12-202ENST00000407343 LAMA3Q16787 3333 aa0.2□□□□□ -2.38
PTPN12-202ENST00000407343 ZANQ9Y493 2812 aa0.2□□□□□ -2.38
PTPN12-202ENST00000407343 MGAM2Q2M2H8 2515 aa0.2□□□□□ -2.38
PTPN12-202ENST00000407343 ITPR3Q14573 2671 aa0.2□□□□□ -2.38
PTPN12-202ENST00000407343 NBEAL1Q6ZS30 2694 aa0.2□□□□□ -2.38
PTPN12-202ENST00000407343 DNAH12Q6ZR08 3092 aa0.19□□□□□ -2.38
PTPN12-202ENST00000407343 KRTAP6-2Q3LI66 62 aa0.19□□□□□ -2.38
PTPN12-202ENST00000407343 HMCN2Q8NDA2 5059 aa0.19□□□□□ -2.38
PTPN12-202ENST00000407343 MUC3AQ02505 3323 aa0.19□□□□□ -2.38
PTPN12-202ENST00000407343 SPTBN5Q9NRC6 3674 aaKnown RBP0.19□□□□□ -2.38
PTPN12-202ENST00000407343 HYDINQ4G0P3 5121 aa0.19□□□□□ -2.38
PTPN12-202ENST00000407343 FAT3Q8TDW7 4589 aa0.18□□□□□ -2.38
PTPN12-202ENST00000407343 USP9YO00507 2555 aaPredicted RBP0.18□□□□□ -2.38
PTPN12-202ENST00000407343 UTRNP46939 3433 aa0.18□□□□□ -2.38
PTPN12-202ENST00000407343 CENPFP49454 3210 aa0.18□□□□□ -2.38
PTPN12-202ENST00000407343 EYSQ5T1H1 3165 aa0.18□□□□□ -2.38
PTPN12-202ENST00000407343 SMR3BP02814 79 aaPredicted RBP0.18□□□□□ -2.38
PTPN12-202ENST00000407343 SPRR2EP22531 72 aa0.18□□□□□ -2.38
PTPN12-202ENST00000407343 SPRR2AP35326 72 aa0.18□□□□□ -2.38
PTPN12-202ENST00000407343 CRYBG3Q68DQ2 2970 aa0.18□□□□□ -2.38
PTPN12-202ENST00000407343 COL12A1Q99715 3063 aa0.18□□□□□ -2.38
PTPN12-202ENST00000407343 EP400Q96L91 3159 aa0.18□□□□□ -2.38
PTPN12-202ENST00000407343 ASPMQ8IZT6 3477 aa0.18□□□□□ -2.38
PTPN12-202ENST00000407343 CEP295Q9C0D2 2601 aa0.17□□□□□ -2.38
PTPN12-202ENST00000407343 C5orf42Q9H799 3197 aa0.17□□□□□ -2.38
PTPN12-202ENST00000407343 TLN2Q9Y4G6 2542 aa0.17□□□□□ -2.38
PTPN12-202ENST00000407343 CSMD1Q96PZ7 3565 aa0.17□□□□□ -2.38
PTPN12-202ENST00000407343 A8MTW9 85 aa0.17□□□□□ -2.38
PTPN12-202ENST00000407343 KRTAP19-6Q3LI70 58 aa0.17□□□□□ -2.38
PTPN12-202ENST00000407343 TEX15Q9BXT5 2789 aa0.17□□□□□ -2.38
PTPN12-202ENST00000407343 LRP1BQ9NZR2 4599 aa0.17□□□□□ -2.38
PTPN12-202ENST00000407343 APOBP04114 4563 aaKnown RBP0.17□□□□□ -2.38
PTPN12-202ENST00000407343 PKHD1P08F94 4074 aa0.17□□□□□ -2.38
PTPN12-202ENST00000407343 RELNP78509 3460 aa0.17□□□□□ -2.38
PTPN12-202ENST00000407343 SVEP1Q4LDE5 3571 aa0.16□□□□□ -2.38
PTPN12-202ENST00000407343 BRCA2P51587 3418 aa0.16□□□□□ -2.38
PTPN12-202ENST00000407343 CHD7Q9P2D1 2997 aa0.16□□□□□ -2.38
PTPN12-202ENST00000407343 MXRA5Q9NR99 2828 aa0.16□□□□□ -2.38
PTPN12-202ENST00000407343 ANK3Q12955 4377 aaKnown RBP0.16□□□□□ -2.38
PTPN12-202ENST00000407343 M0QZ58 72 aa0.16□□□□□ -2.38
PTPN12-202ENST00000407343 DCHS1Q96JQ0 3298 aa0.16□□□□□ -2.38
PTPN12-202ENST00000407343 LRP2P98164 4655 aa0.16□□□□□ -2.38
PTPN12-202ENST00000407343 FLGP20930 4061 aaPredicted RBP0.16□□□□□ -2.38
PTPN12-202ENST00000407343 NBPF19A0A087WUL8 3843 aa0.15□□□□□ -2.38
PTPN12-202ENST00000407343 FRYQ5TBA9 3013 aa0.15□□□□□ -2.39
PTPN12-202ENST00000407343 CSMD2Q7Z408 3487 aa0.15□□□□□ -2.39
PTPN12-202ENST00000407343 TNP1P09430 55 aa0.15□□□□□ -2.39
PTPN12-202ENST00000407343 POLR2KP53803 58 aaKnown RBP0.15□□□□□ -2.39
PTPN12-202ENST00000407343 SNRPGP62308 76 aaKnown RBP0.15□□□□□ -2.39
PTPN12-202ENST00000407343 DEFB110Q30KQ9 67 aa0.15□□□□□ -2.39
PTPN12-202ENST00000407343 CLPSL2Q6UWE3 100 aa0.15□□□□□ -2.39
PTPN12-202ENST00000407343 Q9Y3F1 56 aa0.15□□□□□ -2.39
PTPN12-202ENST00000407343 CELSR3Q9NYQ7 3312 aa0.15□□□□□ -2.39
PTPN12-202ENST00000407343 CFAP54Q96N23 3096 aa0.15□□□□□ -2.39
PTPN12-202ENST00000407343 DNAH14Q0VDD8 3507 aa0.15□□□□□ -2.39
PTPN12-202ENST00000407343 DNAH3Q8TD57 4116 aa0.15□□□□□ -2.39
PTPN12-202ENST00000407343 SPEGQ15772 3267 aa0.14□□□□□ -2.39
PTPN12-202ENST00000407343 XIRP2A4UGR9 3374 aa0.14□□□□□ -2.39
PTPN12-202ENST00000407343 AKAP9Q99996 3911 aa0.14□□□□□ -2.39
PTPN12-202ENST00000407343 ITPR1Q14643 2758 aa0.14□□□□□ -2.39
PTPN12-202ENST00000407343 DNAH2Q9P225 4427 aa0.14□□□□□ -2.39
PTPN12-202ENST00000407343 LAMA1P25391 3075 aa0.14□□□□□ -2.39
PTPN12-202ENST00000407343 STATHP02808 62 aa0.14□□□□□ -2.39
PTPN12-202ENST00000407343 MT1AP04731 61 aa0.14□□□□□ -2.39
PTPN12-202ENST00000407343 MT4P47944 62 aa0.14□□□□□ -2.39
PTPN12-202ENST00000407343 SPRR2FQ96RM1 72 aa0.14□□□□□ -2.39
PTPN12-202ENST00000407343 SPENQ96T58 3664 aaKnown RBP0.14□□□□□ -2.39
PTPN12-202ENST00000407343 DYNC1H1Q14204 4646 aaKnown RBP0.14□□□□□ -2.39
PTPN12-202ENST00000407343 GOLGB1Q14789 3259 aaKnown RBP0.14□□□□□ -2.39
PTPN12-202ENST00000407343 BOD1L1Q8NFC6 3051 aa0.13□□□□□ -2.39
PTPN12-202ENST00000407343 FREM2Q5SZK8 3169 aa0.13□□□□□ -2.39
PTPN12-202ENST00000407343 CFAP46Q8IYW2 2715 aa0.13□□□□□ -2.39
PTPN12-202ENST00000407343 MYO15AQ9UKN7 3530 aa0.13□□□□□ -2.39
PTPN12-202ENST00000407343 RNF213Q63HN8 5207 aa0.13□□□□□ -2.39
PTPN12-202ENST00000407343 DNAH1Q9P2D7 4330 aa0.13□□□□□ -2.39
PTPN12-202ENST00000407343 VPS13CQ709C8 3753 aa0.12□□□□□ -2.39
PTPN12-202ENST00000407343 SMG1Q96Q15 3661 aaKnown RBP0.12□□□□□ -2.39
PTPN12-202ENST00000407343 PKHD1L1Q86WI1 4243 aa0.12□□□□□ -2.39
PTPN12-202ENST00000407343 TRIOO75962 3097 aa0.12□□□□□ -2.39
PTPN12-202ENST00000407343 RPL39P62891 51 aaKnown RBP0.12□□□□□ -2.39
PTPN12-202ENST00000407343 USH2AO75445 5202 aa0.12□□□□□ -2.39
PTPN12-202ENST00000407343 MUC12Q9UKN1 5478 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms