RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 DYNC1H1Q14204 4646 aaKnown RBP11.65□□□□□ -0.54
CUEDC1-202ENST00000407144 LRP1BQ9NZR2 4599 aa11.64□□□□□ -0.55
CUEDC1-202ENST00000407144 A0A0D9SG42 100 aa11.62□□□□□ -0.55
CUEDC1-202ENST00000407144 BIRC6Q9NR09 4857 aa11.6□□□□□ -0.55
CUEDC1-202ENST00000407144 KRTAP10-2P60368 255 aa11.6□□□□□ -0.55
CUEDC1-202ENST00000407144 KIAA1109Q2LD37 5005 aa11.58□□□□□ -0.56
CUEDC1-202ENST00000407144 KRTAP3-2Q9BYR7 98 aa11.56□□□□□ -0.56
CUEDC1-202ENST00000407144 C9orf92A6NGG3 77 aa11.54□□□□□ -0.56
CUEDC1-202ENST00000407144 S4R3F8 94 aa11.54□□□□□ -0.56
CUEDC1-202ENST00000407144 APOBP04114 4563 aaKnown RBP11.5□□□□□ -0.57
CUEDC1-202ENST00000407144 KRTAP3-3Q9BYR6 98 aa11.5□□□□□ -0.57
CUEDC1-202ENST00000407144 KRTAP10-1P60331 282 aa11.45□□□□□ -0.58
CUEDC1-202ENST00000407144 HSPG2P98160 4391 aa11.44□□□□□ -0.58
CUEDC1-202ENST00000407144 XP32Q5T750 250 aa11.43□□□□□ -0.58
CUEDC1-202ENST00000407144 RYR1P21817 5038 aa11.43□□□□□ -0.58
CUEDC1-202ENST00000407144 KRTAP12-2P59991 146 aa11.4□□□□□ -0.58
CUEDC1-202ENST00000407144 VPS13BQ7Z7G8 4022 aa11.37□□□□□ -0.59
CUEDC1-202ENST00000407144 FAT1Q14517 4588 aa11.36□□□□□ -0.59
CUEDC1-202ENST00000407144 HERC2O95714 4834 aa11.32□□□□□ -0.6
CUEDC1-202ENST00000407144 LUZP6Q538Z0 58 aa11.31□□□□□ -0.6
CUEDC1-202ENST00000407144 KRTAP12-1P59990 96 aa11.3□□□□□ -0.6
CUEDC1-202ENST00000407144 KRTAP17-1Q9BYP8 105 aa11.27□□□□□ -0.6
CUEDC1-202ENST00000407144 DMBT1Q9UGM3 2413 aaPredicted RBP11.17□□□□□ -0.62
CUEDC1-202ENST00000407144 ABCA13Q86UQ4 5058 aa11.17□□□□□ -0.62
CUEDC1-202ENST00000407144 SMR3BP02814 79 aaPredicted RBP11.16□□□□□ -0.62
CUEDC1-202ENST00000407144 PCLOQ9Y6V0 5065 aa11.14□□□□□ -0.63
CUEDC1-202ENST00000407144 PKHD1L1Q86WI1 4243 aa11.12□□□□□ -0.63
CUEDC1-202ENST00000407144 KRTAP4-5Q9BYR2 181 aa11.11□□□□□ -0.63
CUEDC1-202ENST00000407144 M0QZ58 72 aa11.06□□□□□ -0.64
CUEDC1-202ENST00000407144 MYCBP2O75592 4640 aa11.06□□□□□ -0.64
CUEDC1-202ENST00000407144 PLAC4Q8WY50 150 aa11.04□□□□□ -0.64
CUEDC1-202ENST00000407144 Q5VSD8 79 aa11□□□□□ -0.65
CUEDC1-202ENST00000407144 KRTAP10-4P60372 401 aaPredicted RBP10.94□□□□□ -0.66
CUEDC1-202ENST00000407144 KRTAP10-8P60410 259 aa10.94□□□□□ -0.66
CUEDC1-202ENST00000407144 LRP1Q07954 4544 aaKnown RBP10.93□□□□□ -0.66
CUEDC1-202ENST00000407144 FAT3Q8TDW7 4589 aa10.81□□□□□ -0.68
CUEDC1-202ENST00000407144 HERC1Q15751 4861 aa10.72□□□□□ -0.69
CUEDC1-202ENST00000407144 TNXBP22105 4242 aa10.66□□□□□ -0.7
CUEDC1-202ENST00000407144 PP632Q6XCG6 107 aa10.6□□□□□ -0.71
CUEDC1-202ENST00000407144 SEC61BP60468 96 aaKnown RBP10.54□□□□□ -0.72
CUEDC1-202ENST00000407144 MT1HL1P0DM35 61 aa10.51□□□□□ -0.73
CUEDC1-202ENST00000407144 J3QL48 77 aa10.47□□□□□ -0.73
CUEDC1-202ENST00000407144 R4GN34 69 aa10.47□□□□□ -0.73
CUEDC1-202ENST00000407144 HMCN2Q8NDA2 5059 aa10.32□□□□□ -0.76
CUEDC1-202ENST00000407144 SPRR5A0A1B0GTR4 108 aa10.24□□□□□ -0.77
CUEDC1-202ENST00000407144 LRP2P98164 4655 aa10.19□□□□□ -0.78
CUEDC1-202ENST00000407144 LPAP08519 4548 aa10.17□□□□□ -0.78
CUEDC1-202ENST00000407144 CAMK2N1Q7Z7J9 78 aa10.16□□□□□ -0.78
CUEDC1-202ENST00000407144 LORP23490 312 aaPredicted RBP10.09□□□□□ -0.79
CUEDC1-202ENST00000407144 UBR4Q5T4S7 5183 aa10.09□□□□□ -0.79
CUEDC1-202ENST00000407144 KRTAP23-1A1A580 65 aa10.08□□□□□ -0.8
CUEDC1-202ENST00000407144 PRO2289Q9P1D8 64 aa10.07□□□□□ -0.8
CUEDC1-202ENST00000407144 RNF213Q63HN8 5207 aa9.91□□□□□ -0.82
CUEDC1-202ENST00000407144 TNP1P09430 55 aa9.85□□□□□ -0.83
CUEDC1-202ENST00000407144 MUC2Q02817 5179 aa9.82□□□□□ -0.84
CUEDC1-202ENST00000407144 INE1O15225 51 aa9.8□□□□□ -0.84
CUEDC1-202ENST00000407144 MUC17Q685J3 4493 aa9.58□□□□□ -0.88
CUEDC1-202ENST00000407144 KRTAP4-1Q9BYQ7 146 aa9.42□□□□□ -0.9
CUEDC1-202ENST00000407144 FAT4Q6V0I7 4981 aa9.41□□□□□ -0.9
CUEDC1-202ENST00000407144 KRTAP19-2Q3LHN2 52 aa9.39□□□□□ -0.91
CUEDC1-202ENST00000407144 FLGP20930 4061 aaPredicted RBP9.28□□□□□ -0.92
CUEDC1-202ENST00000407144 LCE3AQ5TA76 89 aa9.15□□□□□ -0.94
CUEDC1-202ENST00000407144 LCE2CQ5TA81 110 aa9.07□□□□□ -0.96
CUEDC1-202ENST00000407144 KRTAP8-1Q8IUC2 63 aa9.03□□□□□ -0.96
CUEDC1-202ENST00000407144 LCE2AQ5TA79 106 aaPredicted RBP9.02□□□□□ -0.97
CUEDC1-202ENST00000407144 SPRR2GQ9BYE4 73 aa8.96□□□□□ -0.98
CUEDC1-202ENST00000407144 MT1HP80294 61 aa8.9□□□□□ -0.98
CUEDC1-202ENST00000407144 KRTAP19-1Q8IUB9 90 aa8.79□□□□□ -1
CUEDC1-202ENST00000407144 KRTAP10-12P60413 245 aa8.78□□□□□ -1
CUEDC1-202ENST00000407144 M0R2T5 61 aa8.72□□□□□ -1.01
CUEDC1-202ENST00000407144 KRTAP12-3P60328 96 aa8.71□□□□□ -1.02
CUEDC1-202ENST00000407144 KRTAP10-10P60014 251 aa8.62□□□□□ -1.03
CUEDC1-202ENST00000407144 KRTAP10-5P60370 271 aa8.51□□□□□ -1.05
CUEDC1-202ENST00000407144 FSIP2Q5CZC0 6907 aa8.5□□□□□ -1.05
CUEDC1-202ENST00000407144 KRTAP9-8Q9BYQ0 159 aa8.49□□□□□ -1.05
CUEDC1-202ENST00000407144 KRTAP9-2Q9BYQ4 174 aa8.46□□□□□ -1.06
CUEDC1-202ENST00000407144 KRTAP19-8Q3LI54 63 aa8.41□□□□□ -1.06
CUEDC1-202ENST00000407144 MT2AP02795 61 aa8.4□□□□□ -1.06
CUEDC1-202ENST00000407144 MT1FP04733 61 aa8.37□□□□□ -1.07
CUEDC1-202ENST00000407144 MT1XP80297 61 aa8.36□□□□□ -1.07
CUEDC1-202ENST00000407144 LCE2DQ5TA82 110 aaPredicted RBP8.32□□□□□ -1.08
CUEDC1-202ENST00000407144 LCE3CQ5T5A8 94 aa8.27□□□□□ -1.09
CUEDC1-202ENST00000407144 USH2AO75445 5202 aa8.26□□□□□ -1.09
CUEDC1-202ENST00000407144 MT1BP07438 61 aa8.2□□□□□ -1.1
CUEDC1-202ENST00000407144 KRTAP9-3Q9BYQ3 159 aa8.2□□□□□ -1.1
CUEDC1-202ENST00000407144 KRTAP2-3P0C7H8 128 aa8.17□□□□□ -1.1
CUEDC1-202ENST00000407144 KRTAP10-7P60409 375 aaPredicted RBP8.17□□□□□ -1.1
CUEDC1-202ENST00000407144 KRTAP2-4Q9BYR9 128 aa8.17□□□□□ -1.1
CUEDC1-202ENST00000407144 KRTAP2-1Q9BYU5 128 aa8.17□□□□□ -1.1
CUEDC1-202ENST00000407144 LCE2BO14633 110 aa8.12□□□□□ -1.11
CUEDC1-202ENST00000407144 SSPOA2VEC9 5147 aa8.1□□□□□ -1.11
CUEDC1-202ENST00000407144 CRCT1Q9UGL9 99 aa8.01□□□□□ -1.13
CUEDC1-202ENST00000407144 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
CUEDC1-202ENST00000407144 KRTAP19-5Q3LI72 72 aa8□□□□□ -1.13
CUEDC1-202ENST00000407144 KRTAP9-6A8MVA2 160 aa8□□□□□ -1.13
CUEDC1-202ENST00000407144 FCGBPQ9Y6R7 5405 aaPredicted RBP7.83□□□□□ -1.16
CUEDC1-202ENST00000407144 KRTAP19-4Q3LI73 84 aa7.74□□□□□ -1.17
CUEDC1-202ENST00000407144 KRTAP19-6Q3LI70 58 aa7.69□□□□□ -1.18
CUEDC1-202ENST00000407144 MACF1Q9UPN3 7388 aaKnown RBP7.58□□□□□ -1.2
CUEDC1-202ENST00000407144 SYNE2Q8WXH0 6885 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms