RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 UQCR11O14957 56 aa8.28□□□□□ -1.08
LIMK2-204ENST00000406516 MIR22HGQ0VDD5 57 aa8.27□□□□□ -1.08
LIMK2-204ENST00000406516 HERC1Q15751 4861 aa8.27□□□□□ -1.09
LIMK2-204ENST00000406516 RBM12B-AS1Q9P1G2 102 aa8.26□□□□□ -1.09
LIMK2-204ENST00000406516 A8MUU9 505 aa8.21□□□□□ -1.09
LIMK2-204ENST00000406516 C20orf166-AS1Q96NR2 134 aa8.21□□□□□ -1.09
LIMK2-204ENST00000406516 PRAC1Q96KF2 57 aa8.16□□□□□ -1.1
LIMK2-204ENST00000406516 ADM2Q7Z4H4 148 aa8.14□□□□□ -1.11
LIMK2-204ENST00000406516 KRTAP3-1Q9BYR8 98 aa8.13□□□□□ -1.11
LIMK2-204ENST00000406516 HMCN2Q8NDA2 5059 aa8.04□□□□□ -1.12
LIMK2-204ENST00000406516 H0YAA0 97 aa8.02□□□□□ -1.13
LIMK2-204ENST00000406516 A0A1B0GU33 70 aa7.98□□□□□ -1.13
LIMK2-204ENST00000406516 COX6B2Q6YFQ2 88 aa7.98□□□□□ -1.13
LIMK2-204ENST00000406516 LPAP08519 4548 aa7.97□□□□□ -1.13
LIMK2-204ENST00000406516 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
LIMK2-204ENST00000406516 LRP2P98164 4655 aa7.91□□□□□ -1.14
LIMK2-204ENST00000406516 CSAG1Q6PB30 78 aa7.9□□□□□ -1.15
LIMK2-204ENST00000406516 LINC01554Q52M75 96 aa7.84□□□□□ -1.15
LIMK2-204ENST00000406516 RPL37P61927 97 aaKnown RBP7.84□□□□□ -1.16
LIMK2-204ENST00000406516 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
LIMK2-204ENST00000406516 XP32Q5T750 250 aa7.81□□□□□ -1.16
LIMK2-204ENST00000406516 UBR4Q5T4S7 5183 aa7.79□□□□□ -1.16
LIMK2-204ENST00000406516 KRTAP3-3Q9BYR6 98 aa7.78□□□□□ -1.16
LIMK2-204ENST00000406516 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
LIMK2-204ENST00000406516 S4R3F8 94 aa7.72□□□□□ -1.17
LIMK2-204ENST00000406516 K7ERS5 55 aa7.72□□□□□ -1.17
LIMK2-204ENST00000406516 KRTAP13-4Q3LI77 160 aa7.67□□□□□ -1.18
LIMK2-204ENST00000406516 H3BS24 57 aa7.67□□□□□ -1.18
LIMK2-204ENST00000406516 KRTAP3-2Q9BYR7 98 aa7.67□□□□□ -1.18
LIMK2-204ENST00000406516 A0A0D9SG42 100 aa7.65□□□□□ -1.18
LIMK2-204ENST00000406516 KRTAP25-1Q3LHN0 102 aa7.65□□□□□ -1.18
LIMK2-204ENST00000406516 RNF213Q63HN8 5207 aa7.64□□□□□ -1.19
LIMK2-204ENST00000406516 CRIPTQ9P021 101 aa7.63□□□□□ -1.19
LIMK2-204ENST00000406516 MUC2Q02817 5179 aa7.62□□□□□ -1.19
LIMK2-204ENST00000406516 P0C880 135 aa7.61□□□□□ -1.19
LIMK2-204ENST00000406516 MUC17Q685J3 4493 aa7.6□□□□□ -1.19
LIMK2-204ENST00000406516 SEC61BP60468 96 aaKnown RBP7.56□□□□□ -1.2
LIMK2-204ENST00000406516 ROMO1P60602 79 aa7.55□□□□□ -1.2
LIMK2-204ENST00000406516 KRTAP4-1Q9BYQ7 146 aa7.53□□□□□ -1.2
LIMK2-204ENST00000406516 KRTAP12-2P59991 146 aa7.43□□□□□ -1.22
LIMK2-204ENST00000406516 SPINT4Q6UDR6 99 aa7.38□□□□□ -1.23
LIMK2-204ENST00000406516 KRTAP12-1P59990 96 aa7.35□□□□□ -1.23
LIMK2-204ENST00000406516 C10orf95Q9H7T3 257 aa7.34□□□□□ -1.23
LIMK2-204ENST00000406516 FAT4Q6V0I7 4981 aa7.3□□□□□ -1.24
LIMK2-204ENST00000406516 M0QZ58 72 aa7.3□□□□□ -1.24
LIMK2-204ENST00000406516 KRTAP19-2Q3LHN2 52 aa7.27□□□□□ -1.25
LIMK2-204ENST00000406516 LCE2CQ5TA81 110 aa7.23□□□□□ -1.25
LIMK2-204ENST00000406516 R4GN34 69 aa7.18□□□□□ -1.26
LIMK2-204ENST00000406516 LORP23490 312 aaPredicted RBP7.11□□□□□ -1.27
LIMK2-204ENST00000406516 LCE2AQ5TA79 106 aaPredicted RBP7.11□□□□□ -1.27
LIMK2-204ENST00000406516 MT1HP80294 61 aa7.09□□□□□ -1.27
LIMK2-204ENST00000406516 FLGP20930 4061 aaPredicted RBP7.07□□□□□ -1.28
LIMK2-204ENST00000406516 M0R2T5 61 aa6.98□□□□□ -1.29
LIMK2-204ENST00000406516 KRTAP15-1Q3LI76 137 aa6.97□□□□□ -1.29
LIMK2-204ENST00000406516 NDUFAF8A1L188 74 aa6.84□□□□□ -1.31
LIMK2-204ENST00000406516 CAMK2N1Q7Z7J9 78 aa6.83□□□□□ -1.32
LIMK2-204ENST00000406516 KRTAP9-8Q9BYQ0 159 aa6.79□□□□□ -1.32
LIMK2-204ENST00000406516 MT2AP02795 61 aa6.72□□□□□ -1.33
LIMK2-204ENST00000406516 PLAC4Q8WY50 150 aa6.69□□□□□ -1.34
LIMK2-204ENST00000406516 MT1FP04733 61 aa6.68□□□□□ -1.34
LIMK2-204ENST00000406516 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
LIMK2-204ENST00000406516 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
LIMK2-204ENST00000406516 A0A0A0MQY5 61 aa6.6□□□□□ -1.35
LIMK2-204ENST00000406516 KRTAP9-2Q9BYQ4 174 aa6.58□□□□□ -1.36
LIMK2-204ENST00000406516 LCE2DQ5TA82 110 aaPredicted RBP6.57□□□□□ -1.36
LIMK2-204ENST00000406516 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
LIMK2-204ENST00000406516 TNP1P09430 55 aa6.54□□□□□ -1.36
LIMK2-204ENST00000406516 FSIP2Q5CZC0 6907 aa6.48□□□□□ -1.37
LIMK2-204ENST00000406516 LCE2BO14633 110 aa6.46□□□□□ -1.38
LIMK2-204ENST00000406516 SPRR2GQ9BYE4 73 aa6.45□□□□□ -1.38
LIMK2-204ENST00000406516 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
LIMK2-204ENST00000406516 USH2AO75445 5202 aa6.42□□□□□ -1.38
LIMK2-204ENST00000406516 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
LIMK2-204ENST00000406516 LUZP6Q538Z0 58 aa6.38□□□□□ -1.39
LIMK2-204ENST00000406516 SSPOA2VEC9 5147 aa6.29□□□□□ -1.4
LIMK2-204ENST00000406516 CRCT1Q9UGL9 99 aa6.27□□□□□ -1.41
LIMK2-204ENST00000406516 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
LIMK2-204ENST00000406516 MT1BP07438 61 aa6.22□□□□□ -1.41
LIMK2-204ENST00000406516 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
LIMK2-204ENST00000406516 KRTAP9-6A0A140TA67 174 aa6.21□□□□□ -1.42
LIMK2-204ENST00000406516 SPRR5A0A1B0GTR4 108 aa6.19□□□□□ -1.42
LIMK2-204ENST00000406516 KRTAP19-6Q3LI70 58 aa6.11□□□□□ -1.43
LIMK2-204ENST00000406516 FCGBPQ9Y6R7 5405 aaPredicted RBP6.09□□□□□ -1.43
LIMK2-204ENST00000406516 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
LIMK2-204ENST00000406516 MT1XP80297 61 aa6.07□□□□□ -1.44
LIMK2-204ENST00000406516 KRTAP8-1Q8IUC2 63 aa6.02□□□□□ -1.45
LIMK2-204ENST00000406516 KRTAP10-12P60413 245 aa5.97□□□□□ -1.45
LIMK2-204ENST00000406516 KRTAP10-7P60409 375 aaPredicted RBP5.92□□□□□ -1.46
LIMK2-204ENST00000406516 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
LIMK2-204ENST00000406516 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
LIMK2-204ENST00000406516 MACF1Q9UPN3 7388 aaKnown RBP5.83□□□□□ -1.48
LIMK2-204ENST00000406516 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
LIMK2-204ENST00000406516 SYNE2Q8WXH0 6885 aaKnown RBP5.73□□□□□ -1.49
LIMK2-204ENST00000406516 KMT2DO14686 5537 aa5.71□□□□□ -1.5
LIMK2-204ENST00000406516 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
LIMK2-204ENST00000406516 KRTAP9-7A8MTY7 169 aa5.63□□□□□ -1.51
LIMK2-204ENST00000406516 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
LIMK2-204ENST00000406516 KRTAP4-8Q9BYQ9 185 aa5.61□□□□□ -1.51
LIMK2-204ENST00000406516 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
LIMK2-204ENST00000406516 KRTAP6-3Q3LI67 103 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms