RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 KRTAP3-3Q9BYR6 98 aa15.94■□□□□ 0.14
CSNK1E-204ENST00000403904 H7BZZ5 65 aa15.93■□□□□ 0.14
CSNK1E-204ENST00000403904 ACYP2P14621 99 aa15.87■□□□□ 0.13
CSNK1E-204ENST00000403904 CSAG1Q6PB30 78 aa15.87■□□□□ 0.13
CSNK1E-204ENST00000403904 KRTAP9-8Q9BYQ0 159 aa15.86■□□□□ 0.13
CSNK1E-204ENST00000403904 MT2AP02795 61 aa15.74■□□□□ 0.11
CSNK1E-204ENST00000403904 MT1FP04733 61 aa15.63■□□□□ 0.09
CSNK1E-204ENST00000403904 CHKB-CPT1BH3BT56 60 aa15.61■□□□□ 0.09
CSNK1E-204ENST00000403904 KRTAP10-10P60014 251 aa15.59■□□□□ 0.09
CSNK1E-204ENST00000403904 COA5Q86WW8 74 aa15.52■□□□□ 0.07
CSNK1E-204ENST00000403904 SPTSSBQ8NFR3 76 aa15.45■□□□□ 0.06
CSNK1E-204ENST00000403904 PCP4P48539 62 aa15.41■□□□□ 0.06
CSNK1E-204ENST00000403904 ATP5EP56381 51 aaPredicted RBP15.41■□□□□ 0.06
CSNK1E-204ENST00000403904 TMEM258P61165 79 aa15.41■□□□□ 0.06
CSNK1E-204ENST00000403904 H0YAA0 97 aa15.38■□□□□ 0.05
CSNK1E-204ENST00000403904 LCE2DQ5TA82 110 aaPredicted RBP15.36■□□□□ 0.05
CSNK1E-204ENST00000403904 ADM2Q7Z4H4 148 aa15.32■□□□□ 0.04
CSNK1E-204ENST00000403904 KRTAP9-3Q9BYQ3 159 aa15.32■□□□□ 0.04
CSNK1E-204ENST00000403904 KRTAP9-2Q9BYQ4 174 aa15.27■□□□□ 0.03
CSNK1E-204ENST00000403904 KRTAP3-2Q9BYR7 98 aa15.15■□□□□ 0.02
CSNK1E-204ENST00000403904 P0C880 135 aa15.13■□□□□ 0.01
CSNK1E-204ENST00000403904 LCE2BO14633 110 aa15.06■□□□□ 0
CSNK1E-204ENST00000403904 CRIPTQ9P021 101 aa15.03■□□□□ -0
CSNK1E-204ENST00000403904 KRTAP19-1Q8IUB9 90 aa15.02■□□□□ -0
CSNK1E-204ENST00000403904 USH2AO75445 5202 aa14.96□□□□□ -0.01
CSNK1E-204ENST00000403904 SPRR2GQ9BYE4 73 aa14.96□□□□□ -0.01
CSNK1E-204ENST00000403904 FSIP2Q5CZC0 6907 aa14.96□□□□□ -0.02
CSNK1E-204ENST00000403904 SERP1Q9Y6X1 66 aa14.93□□□□□ -0.02
CSNK1E-204ENST00000403904 SEC61GP60059 68 aa14.85□□□□□ -0.03
CSNK1E-204ENST00000403904 R4GN34 69 aa14.84□□□□□ -0.03
CSNK1E-204ENST00000403904 M0QZ58 72 aa14.78□□□□□ -0.04
CSNK1E-204ENST00000403904 A0A1B0GU69 56 aa14.7□□□□□ -0.06
CSNK1E-204ENST00000403904 KRTAP19-8Q3LI54 63 aa14.69□□□□□ -0.06
CSNK1E-204ENST00000403904 SSPOA2VEC9 5147 aa14.65□□□□□ -0.06
CSNK1E-204ENST00000403904 Q5VV11 94 aa14.62□□□□□ -0.07
CSNK1E-204ENST00000403904 LINC01558Q9Y6Z2 57 aa14.62□□□□□ -0.07
CSNK1E-204ENST00000403904 MT1BP07438 61 aa14.6□□□□□ -0.07
CSNK1E-204ENST00000403904 CRCT1Q9UGL9 99 aa14.59□□□□□ -0.07
CSNK1E-204ENST00000403904 LINC01554Q52M75 96 aa14.55□□□□□ -0.08
CSNK1E-204ENST00000403904 KRTAP13-4Q3LI77 160 aa14.54□□□□□ -0.08
CSNK1E-204ENST00000403904 A0A1B0GU33 70 aa14.52□□□□□ -0.08
CSNK1E-204ENST00000403904 PRR15LQ9BU68 103 aa14.51□□□□□ -0.09
CSNK1E-204ENST00000403904 RPS28P62857 69 aaKnown RBP14.48□□□□□ -0.09
CSNK1E-204ENST00000403904 SMIM26A0A096LP01 95 aa14.41□□□□□ -0.1
CSNK1E-204ENST00000403904 KRTAP9-6A0A140TA67 174 aa14.4□□□□□ -0.1
CSNK1E-204ENST00000403904 SPATA8Q6RVD6 105 aa14.39□□□□□ -0.11
CSNK1E-204ENST00000403904 Q1T7F1 81 aa14.34□□□□□ -0.11
CSNK1E-204ENST00000403904 V9GYY9 64 aa14.34□□□□□ -0.11
CSNK1E-204ENST00000403904 KRTAP19-6Q3LI70 58 aa14.31□□□□□ -0.12
CSNK1E-204ENST00000403904 PLAC4Q8WY50 150 aa14.29□□□□□ -0.12
CSNK1E-204ENST00000403904 A0A0D9SG42 100 aa14.21□□□□□ -0.14
CSNK1E-204ENST00000403904 PSPHP1O15172 72 aa14.21□□□□□ -0.14
CSNK1E-204ENST00000403904 A6NN06 94 aa14.17□□□□□ -0.14
CSNK1E-204ENST00000403904 FCGBPQ9Y6R7 5405 aaPredicted RBP14.15□□□□□ -0.14
CSNK1E-204ENST00000403904 UQCR11O14957 56 aa14.08□□□□□ -0.16
CSNK1E-204ENST00000403904 A8MU10 97 aa14.05□□□□□ -0.16
CSNK1E-204ENST00000403904 KRTAP10-5P60370 271 aa14.03□□□□□ -0.16
CSNK1E-204ENST00000403904 MT1XP80297 61 aa13.93□□□□□ -0.18
CSNK1E-204ENST00000403904 SPINT4Q6UDR6 99 aa13.93□□□□□ -0.18
CSNK1E-204ENST00000403904 KRTAP12-1P59990 96 aa13.92□□□□□ -0.18
CSNK1E-204ENST00000403904 PRO2289Q9P1D8 64 aa13.87□□□□□ -0.19
CSNK1E-204ENST00000403904 MIR22HGQ0VDD5 57 aa13.86□□□□□ -0.19
CSNK1E-204ENST00000403904 KRTAP12-2P59991 146 aa13.84□□□□□ -0.19
CSNK1E-204ENST00000403904 CAMK2N1Q7Z7J9 78 aa13.8□□□□□ -0.2
CSNK1E-204ENST00000403904 A6NED7 52 aa13.75□□□□□ -0.21
CSNK1E-204ENST00000403904 MACF1Q9UPN3 7388 aaKnown RBP13.59□□□□□ -0.23
CSNK1E-204ENST00000403904 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.53□□□□□ -0.24
CSNK1E-204ENST00000403904 K7ERS5 55 aa13.37□□□□□ -0.27
CSNK1E-204ENST00000403904 CDC42SE1Q9NRR8 79 aa13.35□□□□□ -0.27
CSNK1E-204ENST00000403904 KRTAP10-7P60409 375 aaPredicted RBP13.34□□□□□ -0.27
CSNK1E-204ENST00000403904 SYNE2Q8WXH0 6885 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-204ENST00000403904 KMT2DO14686 5537 aa13.26□□□□□ -0.29
CSNK1E-204ENST00000403904 C10orf95Q9H7T3 257 aa13.23□□□□□ -0.29
CSNK1E-204ENST00000403904 KRTAP10-12P60413 245 aa13.21□□□□□ -0.29
CSNK1E-204ENST00000403904 KRTAP9-7A8MTY7 169 aa13.07□□□□□ -0.32
CSNK1E-204ENST00000403904 KRTAP4-8A0A0G2JLE6 195 aa13.07□□□□□ -0.32
CSNK1E-204ENST00000403904 KRTAP4-8Q9BYQ9 185 aa13.07□□□□□ -0.32
CSNK1E-204ENST00000403904 TNP1P09430 55 aa12.96□□□□□ -0.33
CSNK1E-204ENST00000403904 BRK1Q8WUW1 75 aa12.95□□□□□ -0.34
CSNK1E-204ENST00000403904 KRTAP6-3Q3LI67 103 aa12.94□□□□□ -0.34
CSNK1E-204ENST00000403904 KRTAP8-1Q8IUC2 63 aa12.92□□□□□ -0.34
CSNK1E-204ENST00000403904 KRTAP5-9P26371 169 aa12.76□□□□□ -0.37
CSNK1E-204ENST00000403904 KRTAP25-1Q3LHN0 102 aa12.69□□□□□ -0.38
CSNK1E-204ENST00000403904 ROMO1P60602 79 aa12.69□□□□□ -0.38
CSNK1E-204ENST00000403904 SPRR2FQ96RM1 72 aa12.67□□□□□ -0.38
CSNK1E-204ENST00000403904 MUC12Q9UKN1 5478 aa12.65□□□□□ -0.38
CSNK1E-204ENST00000403904 LCE3AQ5TA76 89 aa12.6□□□□□ -0.39
CSNK1E-204ENST00000403904 MDN1Q9NU22 5596 aa12.45□□□□□ -0.42
CSNK1E-204ENST00000403904 KRTAP19-7Q3SYF9 63 aa12.43□□□□□ -0.42
CSNK1E-204ENST00000403904 KRTAP19-5Q3LI72 72 aa12.39□□□□□ -0.43
CSNK1E-204ENST00000403904 MT1EP04732 61 aa12.26□□□□□ -0.45
CSNK1E-204ENST00000403904 NEBP20929 6669 aa12.26□□□□□ -0.45
CSNK1E-204ENST00000403904 KRTAP23-1A1A580 65 aa12.23□□□□□ -0.45
CSNK1E-204ENST00000403904 SPRR2EP22531 72 aa12.23□□□□□ -0.45
CSNK1E-204ENST00000403904 SPRR2BP35325 72 aa12.23□□□□□ -0.45
CSNK1E-204ENST00000403904 SPRR2AP35326 72 aa12.23□□□□□ -0.45
CSNK1E-204ENST00000403904 PMAIP1Q13794 54 aa12.22□□□□□ -0.45
CSNK1E-204ENST00000403904 LCE1AQ5T7P2 110 aa12.21□□□□□ -0.46
CSNK1E-204ENST00000403904 PRO0628Q9UI54 55 aa12.17□□□□□ -0.46
CSNK1E-204ENST00000403904 KRTAP12-3P60328 96 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms