RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
HMGA2-204ENST00000403681 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.3
HMGA2-204ENST00000403681 KRTAP3-3Q9BYR6 98 aa6.89□□□□□ -1.31
HMGA2-204ENST00000403681 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
HMGA2-204ENST00000403681 ALMS1Q8TCU4 4167 aa6.88□□□□□ -1.31
HMGA2-204ENST00000403681 DNAH8Q96JB1 4490 aa6.88□□□□□ -1.31
HMGA2-204ENST00000403681 TNP1P09430 55 aa6.85□□□□□ -1.31
HMGA2-204ENST00000403681 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
HMGA2-204ENST00000403681 A0A1B0GVY2 172 aa6.83□□□□□ -1.32
HMGA2-204ENST00000403681 DNAH17Q9UFH2 4485 aa6.82□□□□□ -1.32
HMGA2-204ENST00000403681 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
HMGA2-204ENST00000403681 DNAH2Q9P225 4427 aa6.78□□□□□ -1.32
HMGA2-204ENST00000403681 FRAS1Q86XX4 4008 aa6.77□□□□□ -1.32
HMGA2-204ENST00000403681 LRP1BQ9NZR2 4599 aa6.77□□□□□ -1.33
HMGA2-204ENST00000403681 DNAH5Q8TE73 4624 aa6.76□□□□□ -1.33
HMGA2-204ENST00000403681 DNAH6Q9C0G6 4158 aa6.76□□□□□ -1.33
HMGA2-204ENST00000403681 DYNC2H1Q8NCM8 4307 aaKnown RBP6.73□□□□□ -1.33
HMGA2-204ENST00000403681 HECTD4Q9Y4D8 3996 aa6.73□□□□□ -1.33
HMGA2-204ENST00000403681 FAT1Q14517 4588 aa6.71□□□□□ -1.34
HMGA2-204ENST00000403681 HYDINQ4G0P3 5121 aa6.69□□□□□ -1.34
HMGA2-204ENST00000403681 KRTAP10-4P60372 401 aaPredicted RBP6.65□□□□□ -1.34
HMGA2-204ENST00000403681 DYNC1H1Q14204 4646 aaKnown RBP6.63□□□□□ -1.35
HMGA2-204ENST00000403681 VPS13BQ7Z7G8 4022 aa6.61□□□□□ -1.35
HMGA2-204ENST00000403681 PKHD1P08F94 4074 aa6.56□□□□□ -1.36
HMGA2-204ENST00000403681 SACSQ9NZJ4 4579 aa6.51□□□□□ -1.37
HMGA2-204ENST00000403681 FAT2Q9NYQ8 4349 aa6.44□□□□□ -1.38
HMGA2-204ENST00000403681 KMT2CQ8NEZ4 4911 aaKnown RBP6.42□□□□□ -1.38
HMGA2-204ENST00000403681 KIAA1109Q2LD37 5005 aa6.42□□□□□ -1.38
HMGA2-204ENST00000403681 MT1HL1P0DM35 61 aa6.4□□□□□ -1.38
HMGA2-204ENST00000403681 APOBP04114 4563 aaKnown RBP6.4□□□□□ -1.38
HMGA2-204ENST00000403681 MYCBP2O75592 4640 aa6.39□□□□□ -1.39
HMGA2-204ENST00000403681 LRP1Q07954 4544 aaKnown RBP6.39□□□□□ -1.39
HMGA2-204ENST00000403681 PKD1P98161 4303 aa6.38□□□□□ -1.39
HMGA2-204ENST00000403681 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
HMGA2-204ENST00000403681 RYR2Q92736 4967 aa6.34□□□□□ -1.39
HMGA2-204ENST00000403681 RYR3Q15413 4870 aa6.32□□□□□ -1.4
HMGA2-204ENST00000403681 RYR1P21817 5038 aa6.31□□□□□ -1.4
HMGA2-204ENST00000403681 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
HMGA2-204ENST00000403681 FAT3Q8TDW7 4589 aa6.26□□□□□ -1.41
HMGA2-204ENST00000403681 KRTAP17-1Q9BYP8 105 aa6.26□□□□□ -1.41
HMGA2-204ENST00000403681 HSPG2P98160 4391 aa6.11□□□□□ -1.43
HMGA2-204ENST00000403681 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
HMGA2-204ENST00000403681 LRP2P98164 4655 aa6.03□□□□□ -1.44
HMGA2-204ENST00000403681 EPPK1P58107 5090 aaKnown RBP6.01□□□□□ -1.45
HMGA2-204ENST00000403681 PKHD1L1Q86WI1 4243 aa5.98□□□□□ -1.45
HMGA2-204ENST00000403681 KRTAP4-1Q9BYQ7 146 aa5.95□□□□□ -1.46
HMGA2-204ENST00000403681 INE1O15225 51 aa5.94□□□□□ -1.46
HMGA2-204ENST00000403681 HERC2O95714 4834 aa5.92□□□□□ -1.46
HMGA2-204ENST00000403681 LPAP08519 4548 aa5.89□□□□□ -1.47
HMGA2-204ENST00000403681 TNXBP22105 4242 aa5.89□□□□□ -1.47
HMGA2-204ENST00000403681 LCE3AQ5TA76 89 aa5.88□□□□□ -1.47
HMGA2-204ENST00000403681 ABCA13Q86UQ4 5058 aa5.79□□□□□ -1.48
HMGA2-204ENST00000403681 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
HMGA2-204ENST00000403681 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
HMGA2-204ENST00000403681 BIRC6Q9NR09 4857 aa5.65□□□□□ -1.51
HMGA2-204ENST00000403681 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
HMGA2-204ENST00000403681 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
HMGA2-204ENST00000403681 MUC2Q02817 5179 aa5.59□□□□□ -1.51
HMGA2-204ENST00000403681 HERC1Q15751 4861 aa5.56□□□□□ -1.52
HMGA2-204ENST00000403681 KRTAP8-1Q8IUC2 63 aa5.51□□□□□ -1.53
HMGA2-204ENST00000403681 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
HMGA2-204ENST00000403681 KRTAP19-1Q8IUB9 90 aa5.47□□□□□ -1.53
HMGA2-204ENST00000403681 MT2AP02795 61 aa5.43□□□□□ -1.54
HMGA2-204ENST00000403681 RNF213Q63HN8 5207 aa5.43□□□□□ -1.54
HMGA2-204ENST00000403681 PCLOQ9Y6V0 5065 aa5.41□□□□□ -1.54
HMGA2-204ENST00000403681 MT1FP04733 61 aa5.4□□□□□ -1.54
HMGA2-204ENST00000403681 MT1HP80294 61 aa5.4□□□□□ -1.55
HMGA2-204ENST00000403681 KRTAP19-2Q3LHN2 52 aa5.39□□□□□ -1.55
HMGA2-204ENST00000403681 FAT4Q6V0I7 4981 aa5.38□□□□□ -1.55
HMGA2-204ENST00000403681 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
HMGA2-204ENST00000403681 UBR4Q5T4S7 5183 aa5.31□□□□□ -1.56
HMGA2-204ENST00000403681 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
HMGA2-204ENST00000403681 HMCN2Q8NDA2 5059 aa5.28□□□□□ -1.56
HMGA2-204ENST00000403681 FLGP20930 4061 aaPredicted RBP5.27□□□□□ -1.57
HMGA2-204ENST00000403681 KRTAP19-8Q3LI54 63 aa5.24□□□□□ -1.57
HMGA2-204ENST00000403681 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
HMGA2-204ENST00000403681 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
HMGA2-204ENST00000403681 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
HMGA2-204ENST00000403681 MT1XP80297 61 aa5.22□□□□□ -1.57
HMGA2-204ENST00000403681 KRTAP10-5P60370 271 aa5.2□□□□□ -1.58
HMGA2-204ENST00000403681 MT1BP07438 61 aa5.15□□□□□ -1.58
HMGA2-204ENST00000403681 SPRR2FQ96RM1 72 aa5.11□□□□□ -1.59
HMGA2-204ENST00000403681 KRTAP9-8Q9BYQ0 159 aa5.11□□□□□ -1.59
HMGA2-204ENST00000403681 LCE2DQ5TA82 110 aaPredicted RBP5.05□□□□□ -1.6
HMGA2-204ENST00000403681 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
HMGA2-204ENST00000403681 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
HMGA2-204ENST00000403681 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
HMGA2-204ENST00000403681 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
HMGA2-204ENST00000403681 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
HMGA2-204ENST00000403681 SPRR2EP22531 72 aa4.88□□□□□ -1.63
HMGA2-204ENST00000403681 SPRR2BP35325 72 aa4.88□□□□□ -1.63
HMGA2-204ENST00000403681 SPRR2AP35326 72 aa4.88□□□□□ -1.63
HMGA2-204ENST00000403681 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
HMGA2-204ENST00000403681 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
HMGA2-204ENST00000403681 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
HMGA2-204ENST00000403681 LCE2BO14633 110 aa4.79□□□□□ -1.64
HMGA2-204ENST00000403681 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
HMGA2-204ENST00000403681 SPRR2DP22532 72 aa4.77□□□□□ -1.65
HMGA2-204ENST00000403681 USH2AO75445 5202 aa4.77□□□□□ -1.65
HMGA2-204ENST00000403681 LCE2AQ5TA79 106 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms