RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 SPINK1P00995 79 aa13.05□□□□□ -0.32
TRIOBP-203ENST00000403663 CSAG1Q6PB30 78 aa13.05□□□□□ -0.32
TRIOBP-203ENST00000403663 DMBT1Q9UGM3 2413 aaPredicted RBP13.03□□□□□ -0.32
TRIOBP-203ENST00000403663 RPS29P62273 56 aaKnown RBP12.93□□□□□ -0.34
TRIOBP-203ENST00000403663 PCLOQ9Y6V0 5065 aa12.87□□□□□ -0.35
TRIOBP-203ENST00000403663 H3BS24 57 aa12.8□□□□□ -0.36
TRIOBP-203ENST00000403663 H0YAA0 97 aa12.74□□□□□ -0.37
TRIOBP-203ENST00000403663 A8MUU9 505 aa12.73□□□□□ -0.37
TRIOBP-203ENST00000403663 J3QL48 77 aa12.7□□□□□ -0.38
TRIOBP-203ENST00000403663 KRTAP25-1Q3LHN0 102 aa12.62□□□□□ -0.39
TRIOBP-203ENST00000403663 C9orf92A6NGG3 77 aa12.61□□□□□ -0.39
TRIOBP-203ENST00000403663 A0A1B0GU33 70 aa12.56□□□□□ -0.4
TRIOBP-203ENST00000403663 HERC1Q15751 4861 aa12.53□□□□□ -0.4
TRIOBP-203ENST00000403663 H1FX-AS1Q4G0G2 97 aa12.5□□□□□ -0.41
TRIOBP-203ENST00000403663 KRTAP3-1Q9BYR8 98 aa12.48□□□□□ -0.41
TRIOBP-203ENST00000403663 LPAP08519 4548 aa12.48□□□□□ -0.41
TRIOBP-203ENST00000403663 ROMO1P60602 79 aa12.46□□□□□ -0.41
TRIOBP-203ENST00000403663 LRP2P98164 4655 aa12.34□□□□□ -0.43
TRIOBP-203ENST00000403663 XP32Q5T750 250 aa12.33□□□□□ -0.44
TRIOBP-203ENST00000403663 C20orf166-AS1Q96NR2 134 aa12.33□□□□□ -0.44
TRIOBP-203ENST00000403663 TPRXLQ17RH7 258 aa12.31□□□□□ -0.44
TRIOBP-203ENST00000403663 CRIPTQ9P021 101 aa12.29□□□□□ -0.44
TRIOBP-203ENST00000403663 K7ERS5 55 aa12.27□□□□□ -0.45
TRIOBP-203ENST00000403663 COX6B2Q6YFQ2 88 aa12.26□□□□□ -0.45
TRIOBP-203ENST00000403663 HMCN2Q8NDA2 5059 aa12.24□□□□□ -0.45
TRIOBP-203ENST00000403663 RPL37P61927 97 aaKnown RBP12.18□□□□□ -0.46
TRIOBP-203ENST00000403663 P0C880 135 aa12.12□□□□□ -0.47
TRIOBP-203ENST00000403663 KRTAP10-6P60371 365 aaPredicted RBP12□□□□□ -0.49
TRIOBP-203ENST00000403663 KRTAP13-4Q3LI77 160 aa11.97□□□□□ -0.49
TRIOBP-203ENST00000403663 KRTAP3-3Q9BYR6 98 aa11.91□□□□□ -0.5
TRIOBP-203ENST00000403663 A0A0D9SG42 100 aa11.89□□□□□ -0.51
TRIOBP-203ENST00000403663 KRTAP3-2Q9BYR7 98 aa11.86□□□□□ -0.51
TRIOBP-203ENST00000403663 SEC61BP60468 96 aaKnown RBP11.85□□□□□ -0.51
TRIOBP-203ENST00000403663 SPINT4Q6UDR6 99 aa11.84□□□□□ -0.51
TRIOBP-203ENST00000403663 MUC17Q685J3 4493 aa11.84□□□□□ -0.51
TRIOBP-203ENST00000403663 KRTAP4-1Q9BYQ7 146 aa11.83□□□□□ -0.52
TRIOBP-203ENST00000403663 MUC2Q02817 5179 aa11.8□□□□□ -0.52
TRIOBP-203ENST00000403663 UBR4Q5T4S7 5183 aa11.79□□□□□ -0.52
TRIOBP-203ENST00000403663 C10orf95Q9H7T3 257 aa11.78□□□□□ -0.52
TRIOBP-203ENST00000403663 KRTAP15-1Q3LI76 137 aa11.66□□□□□ -0.54
TRIOBP-203ENST00000403663 S4R3F8 94 aa11.66□□□□□ -0.54
TRIOBP-203ENST00000403663 KRTAP12-2P59991 146 aa11.62□□□□□ -0.55
TRIOBP-203ENST00000403663 RNF213Q63HN8 5207 aa11.62□□□□□ -0.55
TRIOBP-203ENST00000403663 NDUFAF8A1L188 74 aa11.57□□□□□ -0.56
TRIOBP-203ENST00000403663 KRTAP12-1P59990 96 aa11.49□□□□□ -0.57
TRIOBP-203ENST00000403663 KRTAP19-2Q3LHN2 52 aa11.44□□□□□ -0.58
TRIOBP-203ENST00000403663 FAT4Q6V0I7 4981 aa11.31□□□□□ -0.6
TRIOBP-203ENST00000403663 M0QZ58 72 aa11.25□□□□□ -0.61
TRIOBP-203ENST00000403663 LCE2CQ5TA81 110 aa11.25□□□□□ -0.61
TRIOBP-203ENST00000403663 FLGP20930 4061 aaPredicted RBP11.22□□□□□ -0.61
TRIOBP-203ENST00000403663 MT1HP80294 61 aa11.01□□□□□ -0.65
TRIOBP-203ENST00000403663 PLAC4Q8WY50 150 aa10.87□□□□□ -0.67
TRIOBP-203ENST00000403663 R4GN34 69 aa10.86□□□□□ -0.67
TRIOBP-203ENST00000403663 M0R2T5 61 aa10.84□□□□□ -0.67
TRIOBP-203ENST00000403663 LCE2AQ5TA79 106 aaPredicted RBP10.7□□□□□ -0.7
TRIOBP-203ENST00000403663 LORP23490 312 aaPredicted RBP10.68□□□□□ -0.7
TRIOBP-203ENST00000403663 KRTAP9-8Q9BYQ0 159 aa10.58□□□□□ -0.72
TRIOBP-203ENST00000403663 LUZP6Q538Z0 58 aa10.55□□□□□ -0.72
TRIOBP-203ENST00000403663 MT2AP02795 61 aa10.53□□□□□ -0.72
TRIOBP-203ENST00000403663 PP632Q6XCG6 107 aa10.52□□□□□ -0.73
TRIOBP-203ENST00000403663 MT1FP04733 61 aa10.49□□□□□ -0.73
TRIOBP-203ENST00000403663 A0A0A0MQY5 61 aa10.47□□□□□ -0.73
TRIOBP-203ENST00000403663 KRTAP10-10P60014 251 aa10.4□□□□□ -0.74
TRIOBP-203ENST00000403663 CAMK2N1Q7Z7J9 78 aa10.37□□□□□ -0.75
TRIOBP-203ENST00000403663 KRTAP19-1Q8IUB9 90 aa10.23□□□□□ -0.77
TRIOBP-203ENST00000403663 KRTAP9-3Q9BYQ3 159 aa10.19□□□□□ -0.78
TRIOBP-203ENST00000403663 SPRR2GQ9BYE4 73 aa10.16□□□□□ -0.78
TRIOBP-203ENST00000403663 SPRR5A0A1B0GTR4 108 aa10.07□□□□□ -0.8
TRIOBP-203ENST00000403663 TNP1P09430 55 aa10.06□□□□□ -0.8
TRIOBP-203ENST00000403663 KRTAP23-1A1A580 65 aa10.04□□□□□ -0.8
TRIOBP-203ENST00000403663 LCE2BO14633 110 aa9.99□□□□□ -0.81
TRIOBP-203ENST00000403663 KRTAP19-8Q3LI54 63 aa9.92□□□□□ -0.82
TRIOBP-203ENST00000403663 MT1BP07438 61 aa9.88□□□□□ -0.83
TRIOBP-203ENST00000403663 USH2AO75445 5202 aa9.84□□□□□ -0.83
TRIOBP-203ENST00000403663 FSIP2Q5CZC0 6907 aa9.7□□□□□ -0.86
TRIOBP-203ENST00000403663 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
TRIOBP-203ENST00000403663 SSPOA2VEC9 5147 aa9.58□□□□□ -0.88
TRIOBP-203ENST00000403663 MT1XP80297 61 aa9.51□□□□□ -0.89
TRIOBP-203ENST00000403663 KRTAP9-2Q9BYQ4 174 aa9.51□□□□□ -0.89
TRIOBP-203ENST00000403663 KRTAP10-5P60370 271 aa9.49□□□□□ -0.89
TRIOBP-203ENST00000403663 LCE3AQ5TA76 89 aa9.49□□□□□ -0.89
TRIOBP-203ENST00000403663 PRO2289Q9P1D8 64 aa9.42□□□□□ -0.9
TRIOBP-203ENST00000403663 KRTAP19-6Q3LI70 58 aa9.32□□□□□ -0.92
TRIOBP-203ENST00000403663 INE1O15225 51 aa9.25□□□□□ -0.93
TRIOBP-203ENST00000403663 KRTAP8-1Q8IUC2 63 aa9.25□□□□□ -0.93
TRIOBP-203ENST00000403663 FCGBPQ9Y6R7 5405 aaPredicted RBP9.18□□□□□ -0.94
TRIOBP-203ENST00000403663 KRTAP10-7P60409 375 aaPredicted RBP9.16□□□□□ -0.94
TRIOBP-203ENST00000403663 CRCT1Q9UGL9 99 aa9.11□□□□□ -0.95
TRIOBP-203ENST00000403663 KMT2DO14686 5537 aa9.02□□□□□ -0.97
TRIOBP-203ENST00000403663 KRTAP12-3P60328 96 aa9□□□□□ -0.97
TRIOBP-203ENST00000403663 KRTAP10-12P60413 245 aa8.97□□□□□ -0.97
TRIOBP-203ENST00000403663 KRTAP4-8A0A0G2JLE6 195 aa8.89□□□□□ -0.99
TRIOBP-203ENST00000403663 KRTAP4-8Q9BYQ9 185 aa8.89□□□□□ -0.99
TRIOBP-203ENST00000403663 KRTAP9-6A0A140TA67 174 aa8.79□□□□□ -1
TRIOBP-203ENST00000403663 MACF1Q9UPN3 7388 aaKnown RBP8.77□□□□□ -1.01
TRIOBP-203ENST00000403663 SYNE2Q8WXH0 6885 aaKnown RBP8.57□□□□□ -1.04
TRIOBP-203ENST00000403663 KRTAP19-5Q3LI72 72 aa8.56□□□□□ -1.04
TRIOBP-203ENST00000403663 LCE3CQ5T5A8 94 aa8.51□□□□□ -1.05
TRIOBP-203ENST00000403663 KRTAP19-7Q3SYF9 63 aa8.5□□□□□ -1.05
TRIOBP-203ENST00000403663 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 357 ms