RNA–Protein interactions for RNA: ENST00000403525.5

CAD-202, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 1 (best) BASIC

Gene CAD, Length 6,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-202ENST00000403525 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
CAD-202ENST00000403525 AKAP9Q99996 3911 aa5.57□□□□□ -1.52
CAD-202ENST00000403525 MUC3AQ02505 3323 aa5.56□□□□□ -1.52
CAD-202ENST00000403525 COL7A1Q02388 2944 aa5.56□□□□□ -1.52
CAD-202ENST00000403525 VPS13CQ709C8 3753 aa5.53□□□□□ -1.52
CAD-202ENST00000403525 CUBNO60494 3623 aa5.53□□□□□ -1.52
CAD-202ENST00000403525 SRRM2Q9UQ35 2752 aaKnown RBP5.52□□□□□ -1.53
CAD-202ENST00000403525 KRTAP4-1Q9BYQ7 146 aa5.52□□□□□ -1.53
CAD-202ENST00000403525 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
CAD-202ENST00000403525 MT2AP02795 61 aa5.42□□□□□ -1.54
CAD-202ENST00000403525 DNAH2Q9P225 4427 aa5.42□□□□□ -1.54
CAD-202ENST00000403525 DNAH5Q8TE73 4624 aa5.39□□□□□ -1.55
CAD-202ENST00000403525 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
CAD-202ENST00000403525 DNAH10Q8IVF4 4471 aa5.35□□□□□ -1.55
CAD-202ENST00000403525 CSMD3Q7Z407 3707 aa5.32□□□□□ -1.56
CAD-202ENST00000403525 DNAH11Q96DT5 4516 aa5.31□□□□□ -1.56
CAD-202ENST00000403525 MT1FP04733 61 aa5.3□□□□□ -1.56
CAD-202ENST00000403525 DNAH3Q8TD57 4116 aa5.3□□□□□ -1.56
CAD-202ENST00000403525 SPRR2GQ9BYE4 73 aa5.28□□□□□ -1.56
CAD-202ENST00000403525 FAT2Q9NYQ8 4349 aa5.28□□□□□ -1.56
CAD-202ENST00000403525 PLECQ15149 4684 aaKnown RBP5.25□□□□□ -1.57
CAD-202ENST00000403525 VPS13DQ5THJ4 4388 aa5.24□□□□□ -1.57
CAD-202ENST00000403525 DNAH17Q9UFH2 4485 aa5.24□□□□□ -1.57
CAD-202ENST00000403525 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
CAD-202ENST00000403525 ZNF469Q96JG9 3925 aaPredicted RBP5.23□□□□□ -1.57
CAD-202ENST00000403525 SPRR2EP22531 72 aa5.2□□□□□ -1.58
CAD-202ENST00000403525 SPRR2BP35325 72 aa5.2□□□□□ -1.58
CAD-202ENST00000403525 SPRR2AP35326 72 aa5.2□□□□□ -1.58
CAD-202ENST00000403525 DYNC2H1Q8NCM8 4307 aaKnown RBP5.18□□□□□ -1.58
CAD-202ENST00000403525 LRP1BQ9NZR2 4599 aa5.14□□□□□ -1.59
CAD-202ENST00000403525 DYNC1H1Q14204 4646 aaKnown RBP5.13□□□□□ -1.59
CAD-202ENST00000403525 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
CAD-202ENST00000403525 STARD9Q9P2P6 4700 aa5.06□□□□□ -1.6
CAD-202ENST00000403525 DNAH7Q8WXX0 4024 aa5.06□□□□□ -1.6
CAD-202ENST00000403525 DNAH6Q9C0G6 4158 aa5.06□□□□□ -1.6
CAD-202ENST00000403525 PRKDCP78527 4128 aaKnown RBP5.05□□□□□ -1.6
CAD-202ENST00000403525 SACSQ9NZJ4 4579 aa5.05□□□□□ -1.6
CAD-202ENST00000403525 SPRR2DP22532 72 aa5.04□□□□□ -1.6
CAD-202ENST00000403525 ANK2Q01484 3957 aa5.04□□□□□ -1.6
CAD-202ENST00000403525 DNAH8Q96JB1 4490 aa5.02□□□□□ -1.61
CAD-202ENST00000403525 KMT2AQ03164 3969 aa4.96□□□□□ -1.62
CAD-202ENST00000403525 VPS13BQ7Z7G8 4022 aa4.95□□□□□ -1.62
CAD-202ENST00000403525 LCE2BO14633 110 aa4.94□□□□□ -1.62
CAD-202ENST00000403525 DNHD1Q96M86 4753 aa4.94□□□□□ -1.62
CAD-202ENST00000403525 CMYA5Q8N3K9 4069 aa4.93□□□□□ -1.62
CAD-202ENST00000403525 FAT1Q14517 4588 aa4.92□□□□□ -1.62
CAD-202ENST00000403525 KRTAP17-1Q9BYP8 105 aa4.88□□□□□ -1.63
CAD-202ENST00000403525 RYR1P21817 5038 aa4.87□□□□□ -1.63
CAD-202ENST00000403525 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
CAD-202ENST00000403525 KRTAP19-8Q3LI54 63 aa4.86□□□□□ -1.63
CAD-202ENST00000403525 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
CAD-202ENST00000403525 FAT3Q8TDW7 4589 aa4.84□□□□□ -1.63
CAD-202ENST00000403525 APOBP04114 4563 aaKnown RBP4.82□□□□□ -1.64
CAD-202ENST00000403525 MT1GP13640 62 aa4.81□□□□□ -1.64
CAD-202ENST00000403525 FRAS1Q86XX4 4008 aa4.81□□□□□ -1.64
CAD-202ENST00000403525 KRTAP19-1Q8IUB9 90 aa4.81□□□□□ -1.64
CAD-202ENST00000403525 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
CAD-202ENST00000403525 MT1XP80297 61 aa4.79□□□□□ -1.64
CAD-202ENST00000403525 RYR3Q15413 4870 aa4.75□□□□□ -1.65
CAD-202ENST00000403525 KRTAP9-8Q9BYQ0 159 aa4.73□□□□□ -1.65
CAD-202ENST00000403525 MT1BP07438 61 aa4.72□□□□□ -1.65
CAD-202ENST00000403525 PKHD1L1Q86WI1 4243 aa4.71□□□□□ -1.65
CAD-202ENST00000403525 LYSTQ99698 3801 aa4.69□□□□□ -1.66
CAD-202ENST00000403525 KRTAP4-8A0A0G2JLE6 195 aa4.69□□□□□ -1.66
CAD-202ENST00000403525 KRTAP4-8Q9BYQ9 185 aa4.69□□□□□ -1.66
CAD-202ENST00000403525 LRP1Q07954 4544 aaKnown RBP4.66□□□□□ -1.66
CAD-202ENST00000403525 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.66
CAD-202ENST00000403525 HERC1Q15751 4861 aa4.65□□□□□ -1.67
CAD-202ENST00000403525 LCE2CQ5TA81 110 aa4.63□□□□□ -1.67
CAD-202ENST00000403525 HSPG2P98160 4391 aa4.61□□□□□ -1.67
CAD-202ENST00000403525 HECTD4Q9Y4D8 3996 aa4.6□□□□□ -1.67
CAD-202ENST00000403525 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
CAD-202ENST00000403525 KRTAP9-2Q9BYQ4 174 aa4.5□□□□□ -1.69
CAD-202ENST00000403525 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
CAD-202ENST00000403525 RYR2Q92736 4967 aa4.49□□□□□ -1.69
CAD-202ENST00000403525 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
CAD-202ENST00000403525 MT4P47944 62 aa4.47□□□□□ -1.69
CAD-202ENST00000403525 PKD1P98161 4303 aa4.47□□□□□ -1.69
CAD-202ENST00000403525 LPAP08519 4548 aa4.44□□□□□ -1.7
CAD-202ENST00000403525 MYCBP2O75592 4640 aa4.42□□□□□ -1.7
CAD-202ENST00000403525 LCE3EQ5T5B0 92 aa4.37□□□□□ -1.71
CAD-202ENST00000403525 BIRC6Q9NR09 4857 aa4.37□□□□□ -1.71
CAD-202ENST00000403525 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
CAD-202ENST00000403525 MT1LQ93083 61 aa4.36□□□□□ -1.71
CAD-202ENST00000403525 PKHD1P08F94 4074 aa4.34□□□□□ -1.71
CAD-202ENST00000403525 MT1EP04732 61 aa4.34□□□□□ -1.71
CAD-202ENST00000403525 MUC17Q685J3 4493 aa4.34□□□□□ -1.71
CAD-202ENST00000403525 TNXBP22105 4242 aa4.33□□□□□ -1.72
CAD-202ENST00000403525 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
CAD-202ENST00000403525 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
CAD-202ENST00000403525 HYDINQ4G0P3 5121 aa4.27□□□□□ -1.73
CAD-202ENST00000403525 HERC2O95714 4834 aa4.26□□□□□ -1.73
CAD-202ENST00000403525 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
CAD-202ENST00000403525 KIAA1109Q2LD37 5005 aa4.25□□□□□ -1.73
CAD-202ENST00000403525 MT1MQ8N339 61 aa4.25□□□□□ -1.73
CAD-202ENST00000403525 MT3P25713 68 aa4.24□□□□□ -1.73
CAD-202ENST00000403525 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
CAD-202ENST00000403525 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
CAD-202ENST00000403525 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
CAD-202ENST00000403525 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms